RNA–Protein interactions for RNA: ENST00000544052.6

SCFD1-207, Transcript of sec1 family domain containing 1, humanhuman

TSL 2 BASIC

Gene SCFD1, Length 2,058 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1-207ENST00000544052 UMODL1Q5DID0 1318 aa3.17□□□□□ -1.9
SCFD1-207ENST00000544052 MYO5AQ9Y4I1 1855 aaKnown RBP3.17□□□□□ -1.9
SCFD1-207ENST00000544052 YJEFN3A6XGL0 299 aa3.16□□□□□ -1.9
SCFD1-207ENST00000544052 TCP10L2B9ZVM9 353 aa3.16□□□□□ -1.9
SCFD1-207ENST00000544052 G3V2L1 256 aa3.16□□□□□ -1.9
SCFD1-207ENST00000544052 BBOX1O75936 387 aa3.16□□□□□ -1.9
SCFD1-207ENST00000544052 FGF19O95750 216 aa3.16□□□□□ -1.9
SCFD1-207ENST00000544052 CYP11B1P15538 503 aa3.16□□□□□ -1.9
SCFD1-207ENST00000544052 ARF4P18085 180 aaPredicted RBP3.16□□□□□ -1.9
SCFD1-207ENST00000544052 ACADSBP45954 432 aa3.16□□□□□ -1.9
SCFD1-207ENST00000544052 DHODHQ02127 395 aa3.16□□□□□ -1.9
SCFD1-207ENST00000544052 KLHL30Q0D2K2 578 aa3.16□□□□□ -1.9
SCFD1-207ENST00000544052 FUT7Q11130 342 aa3.16□□□□□ -1.9
SCFD1-207ENST00000544052 TMEM187Q14656 261 aa3.16□□□□□ -1.9
SCFD1-207ENST00000544052 INAQ16352 499 aa3.16□□□□□ -1.9
SCFD1-207ENST00000544052 FASTKD1Q53R41 847 aaKnown RBP3.16□□□□□ -1.9
SCFD1-207ENST00000544052 HSP90AB3PQ58FF7 597 aa3.16□□□□□ -1.9
SCFD1-207ENST00000544052 LCE1AQ5T7P2 110 aa3.16□□□□□ -1.9
SCFD1-207ENST00000544052 NEPROQ6NW34 567 aa3.16□□□□□ -1.9
SCFD1-207ENST00000544052 FIP1L1Q6UN15 594 aaKnown RBP3.16□□□□□ -1.9
SCFD1-207ENST00000544052 USP43Q70EL4 1123 aa3.16□□□□□ -1.9
SCFD1-207ENST00000544052 CHMP1BQ7LBR1 199 aa3.16□□□□□ -1.9
SCFD1-207ENST00000544052 ITIH5Q86UX2 942 aa3.16□□□□□ -1.9
SCFD1-207ENST00000544052 LRRC17Q8N6Y2 441 aa3.16□□□□□ -1.9
SCFD1-207ENST00000544052 OR5M9Q8NGP3 310 aa3.16□□□□□ -1.9
SCFD1-207ENST00000544052 MRPL24Q96A35 216 aaKnown RBP3.16□□□□□ -1.9
SCFD1-207ENST00000544052 TMEM45BQ96B21 275 aa3.16□□□□□ -1.9
SCFD1-207ENST00000544052 TSGA13Q96PP4 275 aa3.16□□□□□ -1.9
SCFD1-207ENST00000544052 CCSER1Q9C0I3 900 aa3.16□□□□□ -1.9
SCFD1-207ENST00000544052 UBE2TQ9NPD8 197 aaPredicted RBP3.16□□□□□ -1.9
SCFD1-207ENST00000544052 KLK11Q9UBX7 282 aa3.16□□□□□ -1.9
SCFD1-207ENST00000544052 LNPEPQ9UIQ6 1025 aa3.16□□□□□ -1.9
SCFD1-207ENST00000544052 PDE4DIPQ5VU43 2346 aa3.16□□□□□ -1.9
SCFD1-207ENST00000544052 CDHR2Q9BYE9 1310 aa3.16□□□□□ -1.9
SCFD1-207ENST00000544052 CDK5RAP2Q96SN8 1893 aa3.16□□□□□ -1.9
SCFD1-207ENST00000544052 CENPFP49454 3210 aa3.16□□□□□ -1.9
SCFD1-207ENST00000544052 PTPRFP10586 1907 aa3.16□□□□□ -1.9
SCFD1-207ENST00000544052 A0A087WYN8 130 aa3.16□□□□□ -1.9
SCFD1-207ENST00000544052 SSX5O60225 188 aa3.16□□□□□ -1.9
SCFD1-207ENST00000544052 DIRAS3O95661 229 aa3.16□□□□□ -1.9
SCFD1-207ENST00000544052 PCCAP05165 728 aaPredicted RBP3.16□□□□□ -1.9
SCFD1-207ENST00000544052 FAM200BP0CF97 657 aa3.16□□□□□ -1.9
SCFD1-207ENST00000544052 CFC1BP0CG36 223 aa3.16□□□□□ -1.9
SCFD1-207ENST00000544052 CFC1P0CG37 223 aa3.16□□□□□ -1.9
SCFD1-207ENST00000544052 DNAJB1P25685 340 aa3.16□□□□□ -1.9
SCFD1-207ENST00000544052 PTPN4P29074 926 aa3.16□□□□□ -1.9
SCFD1-207ENST00000544052 GPR183P32249 361 aa3.16□□□□□ -1.9
SCFD1-207ENST00000544052 ID1P41134 155 aa3.16□□□□□ -1.9
SCFD1-207ENST00000544052 TSFMP43897 325 aaKnown RBP3.16□□□□□ -1.9
SCFD1-207ENST00000544052 MTIF2P46199 727 aaKnown RBP3.16□□□□□ -1.9
SCFD1-207ENST00000544052 ASMTP46597 345 aa3.16□□□□□ -1.9
SCFD1-207ENST00000544052 FHITP49789 147 aa3.16□□□□□ -1.9
SCFD1-207ENST00000544052 SSTP61278 116 aa3.16□□□□□ -1.9
SCFD1-207ENST00000544052 GABPB1Q06547 395 aaPredicted RBP3.16□□□□□ -1.9
SCFD1-207ENST00000544052 HSPA14Q0VDF9 509 aa3.16□□□□□ -1.9
SCFD1-207ENST00000544052 RFTN1Q14699 578 aaPredicted RBP3.16□□□□□ -1.9
SCFD1-207ENST00000544052 SGSM1Q2NKQ1 1148 aa3.16□□□□□ -1.9
SCFD1-207ENST00000544052 HLA-BQ31612 363 aa3.16□□□□□ -1.9
SCFD1-207ENST00000544052 KRTAP24-1Q3LI83 254 aa3.16□□□□□ -1.9
SCFD1-207ENST00000544052 ZNF730Q6ZMV8 503 aa3.16□□□□□ -1.9
SCFD1-207ENST00000544052 MOB2Q70IA6 237 aa3.16□□□□□ -1.9
SCFD1-207ENST00000544052 RNF148Q8N7C7 305 aa3.16□□□□□ -1.9
SCFD1-207ENST00000544052 MINDY2Q8NBR6 621 aa3.16□□□□□ -1.9
SCFD1-207ENST00000544052 OR9Q2Q8NGE9 314 aa3.16□□□□□ -1.9
SCFD1-207ENST00000544052 OR56B1Q8NGI3 324 aa3.16□□□□□ -1.9
SCFD1-207ENST00000544052 ZNF519Q8TB69 540 aa3.16□□□□□ -1.9
SCFD1-207ENST00000544052 PHYHIPQ92561 330 aa3.16□□□□□ -1.9
SCFD1-207ENST00000544052 P3H4Q92791 437 aa3.16□□□□□ -1.9
SCFD1-207ENST00000544052 DEFB118Q96PH6 123 aa3.16□□□□□ -1.9
SCFD1-207ENST00000544052 RAB40CQ96S21 281 aa3.16□□□□□ -1.9
SCFD1-207ENST00000544052 LITAFQ99732 161 aa3.16□□□□□ -1.9
SCFD1-207ENST00000544052 CBWD1Q9BRT8 395 aa3.16□□□□□ -1.9
SCFD1-207ENST00000544052 FTHL17Q9BXU8 183 aa3.16□□□□□ -1.9
SCFD1-207ENST00000544052 TMEM231Q9H6L2 316 aa3.16□□□□□ -1.9
SCFD1-207ENST00000544052 ZNF696Q9H7X3 374 aa3.16□□□□□ -1.9
SCFD1-207ENST00000544052 PLEKHA3Q9HB20 300 aa3.16□□□□□ -1.9
SCFD1-207ENST00000544052 SLC25A19Q9HC21 320 aa3.16□□□□□ -1.9
SCFD1-207ENST00000544052 IL1RAPQ9NPH3 570 aa3.16□□□□□ -1.9
SCFD1-207ENST00000544052 HPS4Q9NQG7 708 aa3.16□□□□□ -1.9
SCFD1-207ENST00000544052 C2orf42Q9NWW7 574 aa3.16□□□□□ -1.9
SCFD1-207ENST00000544052 BAIAP2L1Q9UHR4 511 aa3.16□□□□□ -1.9
SCFD1-207ENST00000544052 PHIPQ8WWQ0 1821 aa3.16□□□□□ -1.9
SCFD1-207ENST00000544052 MKI67P46013 3256 aaKnown RBP3.15□□□□□ -1.9
SCFD1-207ENST00000544052 PRSS44E7EML9 344 aa3.15□□□□□ -1.9
SCFD1-207ENST00000544052 CCSO14618 274 aa3.15□□□□□ -1.9
SCFD1-207ENST00000544052 DUS4LO95620 317 aaKnown RBP3.15□□□□□ -1.9
SCFD1-207ENST00000544052 SERPINF2P08697 491 aa3.15□□□□□ -1.9
SCFD1-207ENST00000544052 EDNRAP25101 427 aa3.15□□□□□ -1.9
SCFD1-207ENST00000544052 HLA-FP30511 346 aa3.15□□□□□ -1.9
SCFD1-207ENST00000544052 PKLRP30613 574 aa3.15□□□□□ -1.9
SCFD1-207ENST00000544052 PRDX2P32119 198 aa3.15□□□□□ -1.9
SCFD1-207ENST00000544052 RGS19P49795 217 aa3.15□□□□□ -1.9
SCFD1-207ENST00000544052 RPL27P61353 136 aaKnown RBP3.15□□□□□ -1.9
SCFD1-207ENST00000544052 RPS8P62241 208 aaKnown RBP3.15□□□□□ -1.9
SCFD1-207ENST00000544052 DRP2Q13474 957 aa3.15□□□□□ -1.9
SCFD1-207ENST00000544052 WDR43Q15061 677 aaKnown RBP eCLIP3.15□□□□□ -1.9
SCFD1-207ENST00000544052 P2RY14Q15391 338 aa3.15□□□□□ -1.9
SCFD1-207ENST00000544052 CLPPQ16740 277 aaPredicted RBP3.15□□□□□ -1.9
SCFD1-207ENST00000544052 HIST2H2AA3Q6FI13 130 aa3.15□□□□□ -1.9
SCFD1-207ENST00000544052 GALNT17Q6IS24 598 aa3.15□□□□□ -1.9
Retrieved 100 of 20,778 RNA–protein pairs in 32.4 ms