RNA–Protein interactions for RNA: ENST00000544040.5

CHD4-210, Transcript of chromodomain helicase DNA binding protein 4, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene CHD4, Length 6,514 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD4-210ENST00000544040 GMDSO60547 372 aa14.73□□□□□ -0.05
CHD4-210ENST00000544040 ETFAP13804 333 aa14.73□□□□□ -0.05
CHD4-210ENST00000544040 RAC2P15153 192 aa14.73□□□□□ -0.05
CHD4-210ENST00000544040 CDK2P24941 298 aa14.73□□□□□ -0.05
CHD4-210ENST00000544040 TBPL1P62380 186 aa14.73□□□□□ -0.05
CHD4-210ENST00000544040 MALLQ13021 153 aa14.73□□□□□ -0.05
CHD4-210ENST00000544040 FAM72AQ5TYM5 149 aa14.73□□□□□ -0.05
CHD4-210ENST00000544040 FAM72DQ6L9T8 149 aa14.73□□□□□ -0.05
CHD4-210ENST00000544040 FAM72BQ86X60 149 aa14.73□□□□□ -0.05
CHD4-210ENST00000544040 OR8J1Q8NGP2 316 aa14.73□□□□□ -0.05
CHD4-210ENST00000544040 F5H5P2 479 aa14.73□□□□□ -0.05
CHD4-210ENST00000544040 KCNC1P48547 511 aa14.73□□□□□ -0.05
CHD4-210ENST00000544040 GATMP50440 423 aa14.73□□□□□ -0.05
CHD4-210ENST00000544040 RPL13AP3Q6NVV1 102 aa14.73□□□□□ -0.05
CHD4-210ENST00000544040 HTR3BO95264 441 aa14.73□□□□□ -0.05
CHD4-210ENST00000544040 SERPINA7P05543 415 aa14.73□□□□□ -0.05
CHD4-210ENST00000544040 DCNP07585 359 aaKnown RBP14.73□□□□□ -0.05
CHD4-210ENST00000544040 FBXO45P0C2W1 286 aa14.73□□□□□ -0.05
CHD4-210ENST00000544040 PORP16435 677 aaPredicted RBP14.73□□□□□ -0.05
CHD4-210ENST00000544040 STK19P49842 368 aaPredicted RBP14.73□□□□□ -0.05
CHD4-210ENST00000544040 OR5AK2Q8NH90 309 aa14.73□□□□□ -0.05
CHD4-210ENST00000544040 HAO2Q9NYQ3 351 aa14.73□□□□□ -0.05
CHD4-210ENST00000544040 CXXC1Q9P0U4 656 aaPredicted RBP14.73□□□□□ -0.05
CHD4-210ENST00000544040 SORBS2O94875 1100 aaKnown RBP14.72□□□□□ -0.05
CHD4-210ENST00000544040 SLC34A2O95436 690 aa14.72□□□□□ -0.05
CHD4-210ENST00000544040 FBLP22087 321 aaKnown RBP14.72□□□□□ -0.05
CHD4-210ENST00000544040 RGS6P49758 472 aa14.72□□□□□ -0.05
CHD4-210ENST00000544040 HLCSP50747 726 aa14.72□□□□□ -0.05
CHD4-210ENST00000544040 ERN2Q76MJ5 926 aaKnown RBP14.72□□□□□ -0.05
CHD4-210ENST00000544040 ACBD7Q8N6N7 88 aa14.72□□□□□ -0.05
CHD4-210ENST00000544040 ARL5BQ96KC2 179 aa14.72□□□□□ -0.05
CHD4-210ENST00000544040 SEZ6LQ9BYH1 1024 aa14.72□□□□□ -0.05
CHD4-210ENST00000544040 PPP1R3DO95685 299 aa14.72□□□□□ -0.05
CHD4-210ENST00000544040 TMEM225BP0DP42 221 aa14.72□□□□□ -0.05
CHD4-210ENST00000544040 LIPCP11150 499 aa14.72□□□□□ -0.05
CHD4-210ENST00000544040 GRIN2CQ14957 1233 aa14.72□□□□□ -0.05
CHD4-210ENST00000544040 RNF111Q6ZNA4 994 aa14.72□□□□□ -0.05
CHD4-210ENST00000544040 LRRC25Q8N386 305 aaPredicted RBP14.72□□□□□ -0.05
CHD4-210ENST00000544040 METTL2AQ96IZ6 378 aaKnown RBP14.72□□□□□ -0.05
CHD4-210ENST00000544040 FEVQ99581 238 aa14.72□□□□□ -0.05
CHD4-210ENST00000544040 PAPOLGQ9BWT3 736 aaKnown RBP14.72□□□□□ -0.05
CHD4-210ENST00000544040 GPR88Q9GZN0 384 aa14.72□□□□□ -0.05
CHD4-210ENST00000544040 POPDC3Q9HBV1 291 aa14.72□□□□□ -0.05
CHD4-210ENST00000544040 FNIP2Q9P278 1114 aa14.72□□□□□ -0.05
CHD4-210ENST00000544040 PMM2O15305 246 aa14.72□□□□□ -0.05
CHD4-210ENST00000544040 PRKYO43930 277 aa14.72□□□□□ -0.05
CHD4-210ENST00000544040 SC5DO75845 299 aa14.72□□□□□ -0.05
CHD4-210ENST00000544040 ALDOAP04075 364 aaKnown RBP14.72□□□□□ -0.05
CHD4-210ENST00000544040 JMJD7P0C870 316 aa14.72□□□□□ -0.05
CHD4-210ENST00000544040 NFATC3Q12968 1075 aa14.72□□□□□ -0.05
CHD4-210ENST00000544040 HACD2Q6Y1H2 254 aa14.72□□□□□ -0.05
CHD4-210ENST00000544040 TMEM173Q86WV6 379 aaPredicted RBP14.72□□□□□ -0.05
CHD4-210ENST00000544040 OR13J1Q8NGT2 312 aa14.72□□□□□ -0.05
CHD4-210ENST00000544040 ARGFXA6NJG6 315 aa14.72□□□□□ -0.05
CHD4-210ENST00000544040 SOBPA7XYQ1 873 aa14.72□□□□□ -0.05
CHD4-210ENST00000544040 YY2O15391 372 aa14.72□□□□□ -0.05
CHD4-210ENST00000544040 SHMT2P34897 504 aa14.72□□□□□ -0.05
CHD4-210ENST00000544040 SSTP61278 116 aa14.72□□□□□ -0.05
CHD4-210ENST00000544040 PSPHP78330 225 aa14.72□□□□□ -0.05
CHD4-210ENST00000544040 FAM189BP81408 668 aa14.72□□□□□ -0.05
CHD4-210ENST00000544040 FGL2Q14314 439 aa14.72□□□□□ -0.05
CHD4-210ENST00000544040 ZDHHC14Q8IZN3 488 aa14.72□□□□□ -0.05
CHD4-210ENST00000544040 OR2T35Q8NGX2 323 aa14.72□□□□□ -0.05
CHD4-210ENST00000544040 OR8K5Q8NH50 307 aa14.72□□□□□ -0.05
CHD4-210ENST00000544040 ZNF696Q9H7X3 374 aa14.72□□□□□ -0.05
CHD4-210ENST00000544040 LYRM1O43325 122 aa14.72□□□□□ -0.05
CHD4-210ENST00000544040 SLC22A5O76082 557 aa14.72□□□□□ -0.05
CHD4-210ENST00000544040 PRKACBP22694 351 aa14.72□□□□□ -0.05
CHD4-210ENST00000544040 FECHP22830 423 aa14.72□□□□□ -0.05
CHD4-210ENST00000544040 HTD2P86397 168 aa14.72□□□□□ -0.05
CHD4-210ENST00000544040 FAM214AQ32MH5 1076 aa14.72□□□□□ -0.05
CHD4-210ENST00000544040 LY6G5CQ5SRR4 150 aa14.72□□□□□ -0.05
CHD4-210ENST00000544040 ARHGAP11AQ6P4F7 1023 aa14.72□□□□□ -0.05
CHD4-210ENST00000544040 TMIGD2Q96BF3 282 aa14.72□□□□□ -0.05
CHD4-210ENST00000544040 RADILQ96JH8 1075 aa14.72□□□□□ -0.05
CHD4-210ENST00000544040 SLC45A3Q96JT2 553 aa14.72□□□□□ -0.05
CHD4-210ENST00000544040 ARHGAP9Q9BRR9 750 aa14.72□□□□□ -0.05
CHD4-210ENST00000544040 GCM1Q9NP62 436 aa14.72□□□□□ -0.05
CHD4-210ENST00000544040 ADAM18Q9Y3Q7 739 aa14.72□□□□□ -0.05
CHD4-210ENST00000544040 LOC105378220A0A1B0GUY1 285 aaPredicted RBP14.71□□□□□ -0.05
CHD4-210ENST00000544040 CRYZL1O95825 349 aa14.71□□□□□ -0.05
CHD4-210ENST00000544040 SCNN1AP37088 669 aa14.71□□□□□ -0.05
CHD4-210ENST00000544040 MTNR1AP48039 350 aa14.71□□□□□ -0.05
CHD4-210ENST00000544040 SQSTM1Q13501 440 aa14.71□□□□□ -0.05
CHD4-210ENST00000544040 PLGLAQ15195 96 aa14.71□□□□□ -0.05
CHD4-210ENST00000544040 METTL2BQ6P1Q9 378 aaKnown RBP14.71□□□□□ -0.05
CHD4-210ENST00000544040 PHF6Q8IWS0 365 aaKnown RBP eCLIP14.71□□□□□ -0.05
CHD4-210ENST00000544040 ZNF619Q8N2I2 560 aa14.71□□□□□ -0.05
CHD4-210ENST00000544040 DDX1Q92499 740 aaKnown RBP14.71□□□□□ -0.05
CHD4-210ENST00000544040 BORCS7Q96B45 105 aa14.71□□□□□ -0.05
CHD4-210ENST00000544040 SMIM3Q9BZL3 60 aa14.71□□□□□ -0.05
CHD4-210ENST00000544040 ARMC1Q9NVT9 282 aa14.71□□□□□ -0.05
CHD4-210ENST00000544040 AIG1Q9NVV5 245 aa14.71□□□□□ -0.05
CHD4-210ENST00000544040 SCAMP2O15127 329 aaKnown RBP14.71□□□□□ -0.05
CHD4-210ENST00000544040 CRTAPO75718 401 aaPredicted RBP14.71□□□□□ -0.05
CHD4-210ENST00000544040 CNR2P34972 360 aa14.71□□□□□ -0.05
CHD4-210ENST00000544040 DLX2Q07687 328 aaPredicted RBP14.71□□□□□ -0.05
CHD4-210ENST00000544040 C1orf61Q13536 156 aa14.71□□□□□ -0.05
CHD4-210ENST00000544040 DCST2Q5T1A1 773 aa14.71□□□□□ -0.05
CHD4-210ENST00000544040 DESI1Q6ICB0 168 aa14.71□□□□□ -0.05
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms