RNA–Protein interactions for RNA: ENST00000543123.1

RTN3-212, Transcript of reticulon 3, humanhuman

TSL 2

Gene RTN3, Length 712 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN3-212ENST00000543123 FARSBQ9NSD9 589 aaKnown RBP12.01□□□□□ -0.49
RTN3-212ENST00000543123 MAT2BQ9NZL9 334 aa12.01□□□□□ -0.49
RTN3-212ENST00000543123 KLRF1Q9NZS2 232 aa12.01□□□□□ -0.49
RTN3-212ENST00000543123 ZNF629Q9UEG4 869 aaPredicted RBP12.01□□□□□ -0.49
RTN3-212ENST00000543123 MCM8Q9UJA3 840 aa12.01□□□□□ -0.49
RTN3-212ENST00000543123 CAMK2AQ9UQM7 478 aa12.01□□□□□ -0.49
RTN3-212ENST00000543123 L3MBTL1Q9Y468 752 aa12.01□□□□□ -0.49
RTN3-212ENST00000543123 GNG14A0A1W2PPG7 69 aa12□□□□□ -0.49
RTN3-212ENST00000543123 MANBAO00462 879 aa12□□□□□ -0.49
RTN3-212ENST00000543123 ULK1O75385 1050 aa12□□□□□ -0.49
RTN3-212ENST00000543123 OR4F21O95013 312 aa12□□□□□ -0.49
RTN3-212ENST00000543123 ACTL6AO96019 429 aa12□□□□□ -0.49
RTN3-212ENST00000543123 ENO1P06733 434 aaKnown RBP12□□□□□ -0.49
RTN3-212ENST00000543123 ABCB1P08183 1280 aaPredicted RBP12□□□□□ -0.49
RTN3-212ENST00000543123 DRD2P14416 443 aa12□□□□□ -0.49
RTN3-212ENST00000543123 TSPAN8P19075 237 aa12□□□□□ -0.49
RTN3-212ENST00000543123 S1PR1P21453 382 aa12□□□□□ -0.49
RTN3-212ENST00000543123 BMP5P22003 454 aa12□□□□□ -0.49
RTN3-212ENST00000543123 ATP5F1P24539 256 aaPredicted RBP12□□□□□ -0.49
RTN3-212ENST00000543123 UQCRC1P31930 480 aa12□□□□□ -0.49
RTN3-212ENST00000543123 KIR2DL3P43628 341 aa12□□□□□ -0.49
RTN3-212ENST00000543123 PPICP45877 212 aa12□□□□□ -0.49
RTN3-212ENST00000543123 GSTM5P46439 218 aa12□□□□□ -0.49
RTN3-212ENST00000543123 PKNOX1P55347 436 aa12□□□□□ -0.49
RTN3-212ENST00000543123 ACSM2AQ08AH3 577 aa12□□□□□ -0.49
RTN3-212ENST00000543123 LCP2Q13094 533 aa12□□□□□ -0.49
RTN3-212ENST00000543123 RCAN2Q14206 197 aa12□□□□□ -0.49
RTN3-212ENST00000543123 HEPACAMQ14CZ8 416 aa12□□□□□ -0.49
RTN3-212ENST00000543123 NNATQ16517 81 aa12□□□□□ -0.49
RTN3-212ENST00000543123 ERCC6LQ2NKX8 1250 aa12□□□□□ -0.49
RTN3-212ENST00000543123 ZNF678Q5SXM1 525 aa12□□□□□ -0.49
RTN3-212ENST00000543123 ACSM2BQ68CK6 577 aa12□□□□□ -0.49
RTN3-212ENST00000543123 BICRALQ6AI39 1079 aa12□□□□□ -0.49
RTN3-212ENST00000543123 VASNQ6EMK4 673 aa12□□□□□ -0.49
RTN3-212ENST00000543123 SCIMPQ6UWF3 145 aa12□□□□□ -0.49
RTN3-212ENST00000543123 ANGPTL8Q6UXH0 198 aa12□□□□□ -0.49
RTN3-212ENST00000543123 RPS27LQ71UM5 84 aaKnown RBP12□□□□□ -0.49
RTN3-212ENST00000543123 CDYL2Q8N8U2 506 aa12□□□□□ -0.49
RTN3-212ENST00000543123 METTL6Q8TCB7 284 aa12□□□□□ -0.49
RTN3-212ENST00000543123 ACMSDQ8TDX5 336 aa12□□□□□ -0.49
RTN3-212ENST00000543123 TM4SF18Q96CE8 201 aa12□□□□□ -0.49
RTN3-212ENST00000543123 TMCO6Q96DC7 493 aa12□□□□□ -0.49
RTN3-212ENST00000543123 OMA1Q96E52 524 aa12□□□□□ -0.49
RTN3-212ENST00000543123 FETUBQ9UGM5 382 aa12□□□□□ -0.49
RTN3-212ENST00000543123 ZNF639Q9UID6 485 aa12□□□□□ -0.49
RTN3-212ENST00000543123 UTS2RQ9UKP6 389 aa12□□□□□ -0.49
RTN3-212ENST00000543123 NINQ8N4C6 2090 aa11.99□□□□□ -0.49
RTN3-212ENST00000543123 SPG11Q96JI7 2443 aa11.99□□□□□ -0.49
RTN3-212ENST00000543123 PRAMEF25A6NGN4 478 aa11.99□□□□□ -0.49
RTN3-212ENST00000543123 FRG2CA6NGY1 282 aa11.99□□□□□ -0.49
RTN3-212ENST00000543123 CD8B2A6NJW9 211 aa11.99□□□□□ -0.49
RTN3-212ENST00000543123 SYT5O00445 386 aa11.99□□□□□ -0.49
RTN3-212ENST00000543123 PCDH7O60245 1069 aa11.99□□□□□ -0.49
RTN3-212ENST00000543123 GSTA1P08263 222 aa11.99□□□□□ -0.49
RTN3-212ENST00000543123 IMPDH1P20839 514 aa11.99□□□□□ -0.49
RTN3-212ENST00000543123 DRD5P21918 477 aa11.99□□□□□ -0.49
RTN3-212ENST00000543123 KRT20P35900 424 aa11.99□□□□□ -0.49
RTN3-212ENST00000543123 NAA20P61599 178 aa11.99□□□□□ -0.49
RTN3-212ENST00000543123 MRPS22P82650 360 aaKnown RBP11.99□□□□□ -0.49
RTN3-212ENST00000543123 MGAT2Q10469 447 aa11.99□□□□□ -0.49
RTN3-212ENST00000543123 EXOSC7Q15024 291 aaKnown RBP11.99□□□□□ -0.49
RTN3-212ENST00000543123 TESK1Q15569 626 aa11.99□□□□□ -0.49
RTN3-212ENST00000543123 FBXL19-AS1Q494R0 122 aa11.99□□□□□ -0.49
RTN3-212ENST00000543123 FNDC7Q5VTL7 733 aa11.99□□□□□ -0.49
RTN3-212ENST00000543123 NSUN5P2Q63ZY6 315 aa11.99□□□□□ -0.49
RTN3-212ENST00000543123 ENPP6Q6UWR7 440 aa11.99□□□□□ -0.49
RTN3-212ENST00000543123 LIX1LQ8IVB5 337 aa11.99□□□□□ -0.49
RTN3-212ENST00000543123 TMEM151AQ8N4L1 468 aa11.99□□□□□ -0.49
RTN3-212ENST00000543123 CEP112Q8N8E3 955 aa11.99□□□□□ -0.49
RTN3-212ENST00000543123 ADCY4Q8NFM4 1077 aa11.99□□□□□ -0.49
RTN3-212ENST00000543123 OR52R1Q8NGF1 315 aa11.99□□□□□ -0.49
RTN3-212ENST00000543123 ZNF675Q8TD23 568 aa11.99□□□□□ -0.49
RTN3-212ENST00000543123 RNASE6Q93091 150 aaKnown RBP11.99□□□□□ -0.49
RTN3-212ENST00000543123 ABTB1Q969K4 478 aaPredicted RBP11.99□□□□□ -0.49
RTN3-212ENST00000543123 CTHRC1Q96CG8 243 aa11.99□□□□□ -0.49
RTN3-212ENST00000543123 CCDC126Q96EE4 140 aa11.99□□□□□ -0.49
RTN3-212ENST00000543123 CNRIP1Q96F85 164 aaPredicted RBP11.99□□□□□ -0.49
RTN3-212ENST00000543123 TMEM237Q96Q45 408 aa11.99□□□□□ -0.49
RTN3-212ENST00000543123 HBEGFQ99075 208 aa11.99□□□□□ -0.49
RTN3-212ENST00000543123 SENP1Q9P0U3 644 aa11.99□□□□□ -0.49
RTN3-212ENST00000543123 PSMC3IPQ9P2W1 217 aaPredicted RBP11.99□□□□□ -0.49
RTN3-212ENST00000543123 DTX4Q9Y2E6 619 aa11.99□□□□□ -0.49
RTN3-212ENST00000543123 PLLPQ9Y342 182 aa11.99□□□□□ -0.49
RTN3-212ENST00000543123 ARHGAP21Q5T5U3 1957 aa11.99□□□□□ -0.49
RTN3-212ENST00000543123 EXPH5Q8NEV8 1989 aa11.99□□□□□ -0.49
RTN3-212ENST00000543123 NCKAP5O14513 1909 aa11.98□□□□□ -0.49
RTN3-212ENST00000543123 A0A1B0GTL3 188 aa11.98□□□□□ -0.49
RTN3-212ENST00000543123 OR6C70A6NIJ9 312 aa11.98□□□□□ -0.49
RTN3-212ENST00000543123 H3BQF6 201 aa11.98□□□□□ -0.49
RTN3-212ENST00000543123 PPP6CO00743 305 aa11.98□□□□□ -0.49
RTN3-212ENST00000543123 GNB5O14775 395 aa11.98□□□□□ -0.49
RTN3-212ENST00000543123 SNPHO15079 494 aa11.98□□□□□ -0.49
RTN3-212ENST00000543123 TO15178 435 aa11.98□□□□□ -0.49
RTN3-212ENST00000543123 CBR3O75828 277 aa11.98□□□□□ -0.49
RTN3-212ENST00000543123 CBX7O95931 251 aa11.98□□□□□ -0.49
RTN3-212ENST00000543123 SBK3P0C264 359 aa11.98□□□□□ -0.49
RTN3-212ENST00000543123 CYP4B1P13584 511 aa11.98□□□□□ -0.49
RTN3-212ENST00000543123 PTPN6P29350 595 aa11.98□□□□□ -0.49
RTN3-212ENST00000543123 CEACAM8P31997 349 aaPredicted RBP11.98□□□□□ -0.49
RTN3-212ENST00000543123 PRKAA2P54646 552 aa11.98□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 47.9 ms