RNA–Protein interactions for RNA: ENST00000542848.5

PTPN6-219, Transcript of protein tyrosine phosphatase, non-receptor type 6, human

TSL 5

Gene PTPN6, Length 656 nt, Biotype nonsense mediated decay.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PTPN6-219	ENST00000542848		A0A1W2PS29	197 aa		10.83	□□□□□ -0.68
PTPN6-219	ENST00000542848	MBD3L4	A6NDZ8	208 aa	Predicted RBP	10.83	□□□□□ -0.68
PTPN6-219	ENST00000542848	MBD3L3	A6NE82	208 aa	Predicted RBP	10.83	□□□□□ -0.68
PTPN6-219	ENST00000542848	TUBAL3	A6NHL2	446 aa		10.83	□□□□□ -0.68
PTPN6-219	ENST00000542848	GOLGA6L10	A6NI86	522 aa		10.83	□□□□□ -0.68
PTPN6-219	ENST00000542848	MBD3L5	A6NJ08	208 aa	Predicted RBP	10.83	□□□□□ -0.68
PTPN6-219	ENST00000542848	OR7A17	O14581	309 aa		10.83	□□□□□ -0.68
PTPN6-219	ENST00000542848	PPM1B	O75688	479 aa		10.83	□□□□□ -0.68
PTPN6-219	ENST00000542848	GOSR1	O95249	250 aa		10.83	□□□□□ -0.68
PTPN6-219	ENST00000542848	SIX3	O95343	332 aa	Predicted RBP	10.83	□□□□□ -0.68
PTPN6-219	ENST00000542848	ACTL6A	O96019	429 aa		10.83	□□□□□ -0.68
PTPN6-219	ENST00000542848	ABCB1	P08183	1280 aa	Predicted RBP	10.83	□□□□□ -0.68
PTPN6-219	ENST00000542848	ABHD2	P08910	425 aa		10.83	□□□□□ -0.68
PTPN6-219	ENST00000542848	NUDT17	P0C025	328 aa		10.83	□□□□□ -0.68
PTPN6-219	ENST00000542848	POR	P16435	677 aa	Predicted RBP	10.83	□□□□□ -0.68
PTPN6-219	ENST00000542848	KRT15	P19012	456 aa		10.83	□□□□□ -0.68
PTPN6-219	ENST00000542848	S1PR1	P21453	382 aa		10.83	□□□□□ -0.68
PTPN6-219	ENST00000542848	GPX3	P22352	226 aa		10.83	□□□□□ -0.68
PTPN6-219	ENST00000542848	TACR1	P25103	407 aa		10.83	□□□□□ -0.68
PTPN6-219	ENST00000542848	PTPN6	P29350	595 aa		10.83	□□□□□ -0.68
PTPN6-219	ENST00000542848	TYK2	P29597	1187 aa		10.83	□□□□□ -0.68
PTPN6-219	ENST00000542848	PHB	P35232	272 aa		10.83	□□□□□ -0.68
PTPN6-219	ENST00000542848	HSD17B3	P37058	310 aa		10.83	□□□□□ -0.68
PTPN6-219	ENST00000542848	CCNG1	P51959	295 aa		10.83	□□□□□ -0.68
PTPN6-219	ENST00000542848	DGKQ	P52824	942 aa		10.83	□□□□□ -0.68
PTPN6-219	ENST00000542848	WNT3	P56703	355 aa		10.83	□□□□□ -0.68
PTPN6-219	ENST00000542848	MAP4K2	Q12851	820 aa		10.83	□□□□□ -0.68
PTPN6-219	ENST00000542848	TOMM20	Q15388	145 aa		10.83	□□□□□ -0.68
PTPN6-219	ENST00000542848	FRG2	Q64ET8	278 aa		10.83	□□□□□ -0.68
PTPN6-219	ENST00000542848	TIGD3	Q6B0B8	471 aa		10.83	□□□□□ -0.68
PTPN6-219	ENST00000542848	SLC30A6	Q6NXT4	461 aa		10.83	□□□□□ -0.68
PTPN6-219	ENST00000542848	NUP54	Q7Z3B4	507 aa		10.83	□□□□□ -0.68
PTPN6-219	ENST00000542848	MBD3L2	Q8NHZ7	208 aa	Predicted RBP	10.83	□□□□□ -0.68
PTPN6-219	ENST00000542848	ZPLD1	Q8TCW7	415 aa		10.83	□□□□□ -0.68
PTPN6-219	ENST00000542848	TRPC4AP	Q8TEL6	797 aa		10.83	□□□□□ -0.68
PTPN6-219	ENST00000542848	UBLCP1	Q8WVY7	318 aa	Predicted RBP	10.83	□□□□□ -0.68
PTPN6-219	ENST00000542848	ABTB1	Q969K4	478 aa	Predicted RBP	10.83	□□□□□ -0.68
PTPN6-219	ENST00000542848	FRG2B	Q96QU4	278 aa		10.83	□□□□□ -0.68
PTPN6-219	ENST00000542848	TRIB1	Q96RU8	372 aa		10.83	□□□□□ -0.68
PTPN6-219	ENST00000542848	JKAMP	Q9P055	326 aa		10.83	□□□□□ -0.68
PTPN6-219	ENST00000542848	TMCO1	Q9UM00	188 aa		10.83	□□□□□ -0.68
PTPN6-219	ENST00000542848	CFL2	Q9Y281	166 aa		10.83	□□□□□ -0.68
PTPN6-219	ENST00000542848	C1orf226	A1L170	272 aa		10.82	□□□□□ -0.68
PTPN6-219	ENST00000542848	STX16-NPEPL1	H3BU86	382 aa		10.82	□□□□□ -0.68
PTPN6-219	ENST00000542848	STX16	O14662	325 aa		10.82	□□□□□ -0.68
PTPN6-219	ENST00000542848	GNB5	O14775	395 aa		10.82	□□□□□ -0.68
PTPN6-219	ENST00000542848	GUCY1B2	O75343	617 aa		10.82	□□□□□ -0.68
PTPN6-219	ENST00000542848	ALDOA	P04075	364 aa	Known RBP	10.82	□□□□□ -0.68
PTPN6-219	ENST00000542848	KLK1	P06870	262 aa		10.82	□□□□□ -0.68
PTPN6-219	ENST00000542848	RBP1	P09455	135 aa		10.82	□□□□□ -0.68
PTPN6-219	ENST00000542848	NT5E	P21589	574 aa		10.82	□□□□□ -0.68
PTPN6-219	ENST00000542848	ARL1	P40616	181 aa	Predicted RBP	10.82	□□□□□ -0.68
PTPN6-219	ENST00000542848	SERPINB8	P50452	374 aa		10.82	□□□□□ -0.68
PTPN6-219	ENST00000542848	NAGLU	P54802	743 aa		10.82	□□□□□ -0.68
PTPN6-219	ENST00000542848	SORD	Q00796	357 aa		10.82	□□□□□ -0.68
PTPN6-219	ENST00000542848	IFT88	Q13099	833 aa		10.82	□□□□□ -0.68
PTPN6-219	ENST00000542848	SNTA1	Q13424	505 aa		10.82	□□□□□ -0.68
PTPN6-219	ENST00000542848	RCAN2	Q14206	197 aa		10.82	□□□□□ -0.68
PTPN6-219	ENST00000542848	PRICKLE4	Q2TBC4	344 aa		10.82	□□□□□ -0.68
PTPN6-219	ENST00000542848	EIPR1	Q53HC9	387 aa		10.82	□□□□□ -0.68
PTPN6-219	ENST00000542848	TECRL	Q5HYJ1	363 aa		10.82	□□□□□ -0.68
PTPN6-219	ENST00000542848	WIPI1	Q5MNZ9	446 aa	Predicted RBP	10.82	□□□□□ -0.68
PTPN6-219	ENST00000542848	CCNYL2	Q5T2Q4	361 aa		10.82	□□□□□ -0.68
PTPN6-219	ENST00000542848	TTC19	Q6DKK2	380 aa	Predicted RBP	10.82	□□□□□ -0.68
PTPN6-219	ENST00000542848	PRR22	Q8IZ63	422 aa		10.82	□□□□□ -0.68
PTPN6-219	ENST00000542848	METTL4	Q8N3J2	472 aa		10.82	□□□□□ -0.68
PTPN6-219	ENST00000542848	PTGR2	Q8N8N7	351 aa	Predicted RBP	10.82	□□□□□ -0.68
PTPN6-219	ENST00000542848	OR52B6	Q8NGF0	335 aa		10.82	□□□□□ -0.68
PTPN6-219	ENST00000542848	OR1J4	Q8NGS1	313 aa		10.82	□□□□□ -0.68
PTPN6-219	ENST00000542848	MRRF	Q96E11	262 aa	Known RBP	10.82	□□□□□ -0.68
PTPN6-219	ENST00000542848	CDK15	Q96Q40	435 aa		10.82	□□□□□ -0.68
PTPN6-219	ENST00000542848	NXF5	Q9H1B4	397 aa	Known RBP	10.82	□□□□□ -0.68
PTPN6-219	ENST00000542848	CDC42EP4	Q9H3Q1	356 aa	Known RBP	10.82	□□□□□ -0.68
PTPN6-219	ENST00000542848	METTL7A	Q9H8H3	244 aa		10.82	□□□□□ -0.68
PTPN6-219	ENST00000542848	CES1P1	Q9UKY3	287 aa		10.82	□□□□□ -0.68
PTPN6-219	ENST00000542848	PCDHA9	Q9Y5H5	950 aa		10.82	□□□□□ -0.68
PTPN6-219	ENST00000542848	DSCAM	O60469	2012 aa		10.82	□□□□□ -0.68
PTPN6-219	ENST00000542848	ACOX3	O15254	700 aa		10.81	□□□□□ -0.68
PTPN6-219	ENST00000542848	RIPK2	O43353	540 aa		10.81	□□□□□ -0.68
PTPN6-219	ENST00000542848	ICOSLG	O75144	302 aa		10.81	□□□□□ -0.68
PTPN6-219	ENST00000542848	CBR3	O75828	277 aa		10.81	□□□□□ -0.68
PTPN6-219	ENST00000542848	RAF1	P04049	648 aa		10.81	□□□□□ -0.68
PTPN6-219	ENST00000542848	ATP1B1	P05026	303 aa		10.81	□□□□□ -0.68
PTPN6-219	ENST00000542848	CYP4B1	P13584	511 aa		10.81	□□□□□ -0.68
PTPN6-219	ENST00000542848	CPN1	P15169	458 aa		10.81	□□□□□ -0.68
PTPN6-219	ENST00000542848	HOXB4	P17483	251 aa	Predicted RBP	10.81	□□□□□ -0.68
PTPN6-219	ENST00000542848	CSNK2A2	P19784	350 aa	Predicted RBP	10.81	□□□□□ -0.68
PTPN6-219	ENST00000542848	GCK	P35557	465 aa		10.81	□□□□□ -0.68
PTPN6-219	ENST00000542848	MAPK12	P53778	367 aa		10.81	□□□□□ -0.68
PTPN6-219	ENST00000542848	DCAF7	P61962	342 aa		10.81	□□□□□ -0.68
PTPN6-219	ENST00000542848	ADAM8	P78325	824 aa		10.81	□□□□□ -0.68
PTPN6-219	ENST00000542848	IFFO1	Q0D2I5	559 aa		10.81	□□□□□ -0.68
PTPN6-219	ENST00000542848	MGAT2	Q10469	447 aa		10.81	□□□□□ -0.68
PTPN6-219	ENST00000542848	FOXD4	Q12950	439 aa	Predicted RBP	10.81	□□□□□ -0.68
PTPN6-219	ENST00000542848	UAP1	Q16222	522 aa	Predicted RBP	10.81	□□□□□ -0.68
PTPN6-219	ENST00000542848	GGTA1P	Q4G0N0	100 aa		10.81	□□□□□ -0.68
PTPN6-219	ENST00000542848	DCST1	Q5T197	706 aa		10.81	□□□□□ -0.68
PTPN6-219	ENST00000542848	FBXW10	Q5XX13	1052 aa		10.81	□□□□□ -0.68
PTPN6-219	ENST00000542848	SLC48A1	Q6P1K1	146 aa		10.81	□□□□□ -0.68
PTPN6-219	ENST00000542848	ANGPTL8	Q6UXH0	198 aa		10.81	□□□□□ -0.68

Retrieved 100 of 20,778 RNA–protein pairs in 37.8 ms