RNA–Protein interactions for RNA: ENST00000542495.5

ATPAF1-212, Transcript of ATP synthase mitochondrial F1 complex assembly factor 1, humanhuman

TSL 2 BASIC

Gene ATPAF1, Length 1,779 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATPAF1-212ENST00000542495 PRR23CQ6ZRP0 262 aa4.9□□□□□ -1.63
ATPAF1-212ENST00000542495 Q7L0L9 218 aa4.9□□□□□ -1.63
ATPAF1-212ENST00000542495 ZER1Q7Z7L7 766 aa4.9□□□□□ -1.63
ATPAF1-212ENST00000542495 NUDT13Q86X67 352 aa4.9□□□□□ -1.63
ATPAF1-212ENST00000542495 SLC34A3Q8N130 599 aa4.9□□□□□ -1.63
ATPAF1-212ENST00000542495 CLIP4Q8N3C7 705 aa4.9□□□□□ -1.63
ATPAF1-212ENST00000542495 CLDN22Q8N7P3 220 aa4.9□□□□□ -1.63
ATPAF1-212ENST00000542495 TCEANCQ8N8B7 351 aa4.9□□□□□ -1.63
ATPAF1-212ENST00000542495 TP53I13Q8NBR0 393 aaPredicted RBP4.9□□□□□ -1.63
ATPAF1-212ENST00000542495 MORN4Q8NDC4 146 aa4.9□□□□□ -1.63
ATPAF1-212ENST00000542495 OR52I1Q8NGK6 324 aa4.9□□□□□ -1.63
ATPAF1-212ENST00000542495 OR6F1Q8NGZ6 308 aa4.9□□□□□ -1.63
ATPAF1-212ENST00000542495 OR5K2Q8NHB8 316 aa4.9□□□□□ -1.63
ATPAF1-212ENST00000542495 CREB3L4Q8TEY5 395 aa4.9□□□□□ -1.63
ATPAF1-212ENST00000542495 TFGQ92734 400 aaPredicted RBP4.9□□□□□ -1.63
ATPAF1-212ENST00000542495 NXPE3Q969Y0 559 aa4.9□□□□□ -1.63
ATPAF1-212ENST00000542495 TP53INP1Q96A56 240 aa4.9□□□□□ -1.63
ATPAF1-212ENST00000542495 SLC25A46Q96AG3 418 aa4.9□□□□□ -1.63
ATPAF1-212ENST00000542495 RGMAQ96B86 450 aa4.9□□□□□ -1.63
ATPAF1-212ENST00000542495 ZNF486Q96H40 463 aaPredicted RBP4.9□□□□□ -1.63
ATPAF1-212ENST00000542495 ZNF607Q96SK3 696 aa4.9□□□□□ -1.63
ATPAF1-212ENST00000542495 KCNS3Q9BQ31 491 aa4.9□□□□□ -1.63
ATPAF1-212ENST00000542495 MED18Q9BUE0 208 aa4.9□□□□□ -1.63
ATPAF1-212ENST00000542495 CNPPD1Q9BV87 410 aa4.9□□□□□ -1.63
ATPAF1-212ENST00000542495 TSSK6Q9BXA6 273 aa4.9□□□□□ -1.63
ATPAF1-212ENST00000542495 SRRQ9GZT4 340 aa4.9□□□□□ -1.63
ATPAF1-212ENST00000542495 MVB12BQ9H7P6 319 aa4.9□□□□□ -1.63
ATPAF1-212ENST00000542495 FGF20Q9NP95 211 aaPredicted RBP4.9□□□□□ -1.63
ATPAF1-212ENST00000542495 ISYNA1Q9NPH2 558 aa4.9□□□□□ -1.63
ATPAF1-212ENST00000542495 SEMA3GQ9NS98 782 aa4.9□□□□□ -1.63
ATPAF1-212ENST00000542495 ERVK13-1Q9NX77 482 aa4.9□□□□□ -1.63
ATPAF1-212ENST00000542495 P2RX2Q9UBL9 471 aa4.9□□□□□ -1.63
ATPAF1-212ENST00000542495 SLC23A2Q9UGH3 650 aa4.9□□□□□ -1.63
ATPAF1-212ENST00000542495 TAC3Q9UHF0 121 aa4.9□□□□□ -1.63
ATPAF1-212ENST00000542495 MUTYHQ9UIF7 546 aa4.9□□□□□ -1.63
ATPAF1-212ENST00000542495 PLAGL1Q9UM63 463 aa4.9□□□□□ -1.63
ATPAF1-212ENST00000542495 ASF1AQ9Y294 204 aa4.9□□□□□ -1.63
ATPAF1-212ENST00000542495 TCF20Q9UGU0 1960 aaKnown RBP4.89□□□□□ -1.63
ATPAF1-212ENST00000542495 PRRT4C9JH25 899 aa4.89□□□□□ -1.63
ATPAF1-212ENST00000542495 SLC28A2O43868 658 aa4.89□□□□□ -1.63
ATPAF1-212ENST00000542495 CLEC3AO75596 197 aa4.89□□□□□ -1.63
ATPAF1-212ENST00000542495 RAB36O95755 333 aa4.89□□□□□ -1.63
ATPAF1-212ENST00000542495 TIMP1P01033 207 aa4.89□□□□□ -1.63
ATPAF1-212ENST00000542495 RPN2P04844 631 aa4.89□□□□□ -1.63
ATPAF1-212ENST00000542495 POU2F2P09086 479 aa4.89□□□□□ -1.63
ATPAF1-212ENST00000542495 HNRNPA1P09651 372 aaKnown RBP eCLIP4.89□□□□□ -1.63
ATPAF1-212ENST00000542495 MSL3P1P0C860 447 aa4.89□□□□□ -1.63
ATPAF1-212ENST00000542495 TRAPPC2P0DI81 140 aa4.89□□□□□ -1.63
ATPAF1-212ENST00000542495 TRAPPC2BP0DI82 140 aa4.89□□□□□ -1.63
ATPAF1-212ENST00000542495 OR12D1P0DN82 309 aa4.89□□□□□ -1.63
ATPAF1-212ENST00000542495 GAAP10253 952 aa4.89□□□□□ -1.63
ATPAF1-212ENST00000542495 DRD2P14416 443 aa4.89□□□□□ -1.63
ATPAF1-212ENST00000542495 MAGP20916 626 aa4.89□□□□□ -1.63
ATPAF1-212ENST00000542495 MMP11P24347 488 aa4.89□□□□□ -1.63
ATPAF1-212ENST00000542495 GIPRP48546 466 aa4.89□□□□□ -1.63
ATPAF1-212ENST00000542495 DGKEP52429 567 aa4.89□□□□□ -1.63
ATPAF1-212ENST00000542495 OR2B6P58173 313 aa4.89□□□□□ -1.63
ATPAF1-212ENST00000542495 UBE3AQ05086 875 aa4.89□□□□□ -1.63
ATPAF1-212ENST00000542495 HSPB3Q12988 150 aa4.89□□□□□ -1.63
ATPAF1-212ENST00000542495 TARDBPQ13148 414 aaKnown RBP eCLIP4.89□□□□□ -1.63
ATPAF1-212ENST00000542495 PIN1Q13526 163 aaPredicted RBP4.89□□□□□ -1.63
ATPAF1-212ENST00000542495 TPBGQ13641 420 aa4.89□□□□□ -1.63
ATPAF1-212ENST00000542495 ELAVL3Q14576 367 aaKnown RBP4.89□□□□□ -1.63
ATPAF1-212ENST00000542495 ZIC1Q15915 447 aa4.89□□□□□ -1.63
ATPAF1-212ENST00000542495 SYPL1Q16563 259 aa4.89□□□□□ -1.63
ATPAF1-212ENST00000542495 CARTPTQ16568 116 aa4.89□□□□□ -1.63
ATPAF1-212ENST00000542495 BAK1Q16611 211 aa4.89□□□□□ -1.63
ATPAF1-212ENST00000542495 NDUFA5Q16718 116 aa4.89□□□□□ -1.63
ATPAF1-212ENST00000542495 DUSP6Q16828 381 aa4.89□□□□□ -1.63
ATPAF1-212ENST00000542495 SPDYE7PQ495Y7 208 aa4.89□□□□□ -1.63
ATPAF1-212ENST00000542495 TCEAL5Q5H9L2 206 aa4.89□□□□□ -1.63
ATPAF1-212ENST00000542495 PRAMEF8Q5VWM4 474 aa4.89□□□□□ -1.63
ATPAF1-212ENST00000542495 PRAMEF7Q5VXH5 474 aa4.89□□□□□ -1.63
ATPAF1-212ENST00000542495 PLPP4Q5VZY2 271 aa4.89□□□□□ -1.63
ATPAF1-212ENST00000542495 KIAA1161Q6NSJ0 714 aa4.89□□□□□ -1.63
ATPAF1-212ENST00000542495 ZNF544Q6NX49 715 aa4.89□□□□□ -1.63
ATPAF1-212ENST00000542495 PAQR6Q6TCH4 344 aa4.89□□□□□ -1.63
ATPAF1-212ENST00000542495 TMPRSS11AQ6ZMR5 421 aa4.89□□□□□ -1.63
ATPAF1-212ENST00000542495 DEF8Q6ZN54 512 aa4.89□□□□□ -1.63
ATPAF1-212ENST00000542495 SPATC1Q76KD6 591 aa4.89□□□□□ -1.63
ATPAF1-212ENST00000542495 BCDIN3DQ7Z5W3 292 aaKnown RBP4.89□□□□□ -1.63
ATPAF1-212ENST00000542495 NRARPQ7Z6K4 114 aa4.89□□□□□ -1.63
ATPAF1-212ENST00000542495 AMZ2Q86W34 360 aa4.89□□□□□ -1.63
ATPAF1-212ENST00000542495 LILRB2Q8N423 598 aa4.89□□□□□ -1.63
ATPAF1-212ENST00000542495 C2orf73Q8N5S3 287 aaPredicted RBP4.89□□□□□ -1.63
ATPAF1-212ENST00000542495 CELF5Q8N6W0 485 aaKnown RBP4.89□□□□□ -1.63
ATPAF1-212ENST00000542495 AMER3Q8N944 861 aa4.89□□□□□ -1.63
ATPAF1-212ENST00000542495 PLA2G15Q8NCC3 412 aa4.89□□□□□ -1.63
ATPAF1-212ENST00000542495 ZNF485Q8NCK3 441 aa4.89□□□□□ -1.63
ATPAF1-212ENST00000542495 OR4K5Q8NGD3 323 aa4.89□□□□□ -1.63
ATPAF1-212ENST00000542495 VANGL1Q8TAA9 524 aaPredicted RBP4.89□□□□□ -1.63
ATPAF1-212ENST00000542495 BBS10Q8TAM1 723 aa4.89□□□□□ -1.63
ATPAF1-212ENST00000542495 SFXN5Q8TD22 340 aa4.89□□□□□ -1.63
ATPAF1-212ENST00000542495 GPR151Q8TDV0 419 aa4.89□□□□□ -1.63
ATPAF1-212ENST00000542495 OR8D1Q8WZ84 308 aa4.89□□□□□ -1.63
ATPAF1-212ENST00000542495 UCN3Q969E3 161 aa4.89□□□□□ -1.63
ATPAF1-212ENST00000542495 NKD1Q969G9 470 aa4.89□□□□□ -1.63
ATPAF1-212ENST00000542495 RSPRY1Q96DX4 576 aa4.89□□□□□ -1.63
ATPAF1-212ENST00000542495 SLC35G5Q96KT7 338 aa4.89□□□□□ -1.63
ATPAF1-212ENST00000542495 CEP19Q96LK0 163 aa4.89□□□□□ -1.63
Retrieved 100 of 20,778 RNA–protein pairs in 86.2 ms