RNA–Protein interactions for RNA: ENST00000542460.5

LIG1-204, Transcript of DNA ligase 1, humanhuman

TSL 2

Gene LIG1, Length 1,527 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG1-204ENST00000542460 ANP32DO95626 131 aa15.88■□□□□ 0.13
LIG1-204ENST00000542460 ZCCHC18P0CG32 403 aa15.88■□□□□ 0.13
LIG1-204ENST00000542460 CDKN2CP42773 168 aa15.88■□□□□ 0.13
LIG1-204ENST00000542460 STX5Q13190 355 aa15.88■□□□□ 0.13
LIG1-204ENST00000542460 RAPSNQ13702 412 aa15.88■□□□□ 0.13
LIG1-204ENST00000542460 CRB2Q5IJ48 1285 aa15.88■□□□□ 0.13
LIG1-204ENST00000542460 PAGE3Q5JUK9 113 aa15.88■□□□□ 0.13
LIG1-204ENST00000542460 LGI4Q8N135 537 aa15.88■□□□□ 0.13
LIG1-204ENST00000542460 FDCSPQ8NFU4 85 aa15.88■□□□□ 0.13
LIG1-204ENST00000542460 DNAJB8Q8NHS0 232 aa15.88■□□□□ 0.13
LIG1-204ENST00000542460 THAP3Q8WTV1 239 aaPredicted RBP15.88■□□□□ 0.13
LIG1-204ENST00000542460 ZNF354BQ96LW1 612 aa15.88■□□□□ 0.13
LIG1-204ENST00000542460 MS4A4EQ96PG1 132 aa15.88■□□□□ 0.13
LIG1-204ENST00000542460 GAL3ST4Q96RP7 486 aa15.88■□□□□ 0.13
LIG1-204ENST00000542460 ZNF552Q9H707 407 aaPredicted RBP15.88■□□□□ 0.13
LIG1-204ENST00000542460 MYOTQ9UBF9 498 aa15.88■□□□□ 0.13
LIG1-204ENST00000542460 GIMAP1-GIMAP5A0A087WTJ2 511 aa15.87■□□□□ 0.13
LIG1-204ENST00000542460 TMEM200CA6NKL6 621 aa15.87■□□□□ 0.13
LIG1-204ENST00000542460 BBIP1A8MTZ0 92 aa15.87■□□□□ 0.13
LIG1-204ENST00000542460 ERN1O75460 977 aaKnown RBP15.87■□□□□ 0.13
LIG1-204ENST00000542460 GSNP06396 782 aa15.87■□□□□ 0.13
LIG1-204ENST00000542460 POLE2P56282 527 aa15.87■□□□□ 0.13
LIG1-204ENST00000542460 DCAF7P61962 342 aa15.87■□□□□ 0.13
LIG1-204ENST00000542460 TP53BP2Q13625 1128 aa15.87■□□□□ 0.13
LIG1-204ENST00000542460 MEP1AQ16819 746 aa15.87■□□□□ 0.13
LIG1-204ENST00000542460 COQ5Q5HYK3 327 aa15.87■□□□□ 0.13
LIG1-204ENST00000542460 ACER2Q5QJU3 275 aa15.87■□□□□ 0.13
LIG1-204ENST00000542460 TCTN3Q6NUS6 607 aa15.87■□□□□ 0.13
LIG1-204ENST00000542460 SNX32Q86XE0 403 aa15.87■□□□□ 0.13
LIG1-204ENST00000542460 TREML1Q86YW5 311 aa15.87■□□□□ 0.13
LIG1-204ENST00000542460 DPP10Q8N608 796 aa15.87■□□□□ 0.13
LIG1-204ENST00000542460 C17orf47Q8NEP4 570 aa15.87■□□□□ 0.13
LIG1-204ENST00000542460 OR5AK3PQ8NH89 298 aa15.87■□□□□ 0.13
LIG1-204ENST00000542460 ADIPOR1Q96A54 375 aa15.87■□□□□ 0.13
LIG1-204ENST00000542460 TP53INP1Q96A56 240 aa15.87■□□□□ 0.13
LIG1-204ENST00000542460 GIMAP5Q96F15 307 aa15.87■□□□□ 0.13
LIG1-204ENST00000542460 VSTM2LQ96N03 204 aa15.87■□□□□ 0.13
LIG1-204ENST00000542460 PHF12Q96QT6 1004 aa15.87■□□□□ 0.13
LIG1-204ENST00000542460 SLC35A5Q9BS91 424 aa15.87■□□□□ 0.13
LIG1-204ENST00000542460 CDCP1Q9H5V8 836 aa15.87■□□□□ 0.13
LIG1-204ENST00000542460 FOLH1BQ9HBA9 442 aa15.87■□□□□ 0.13
LIG1-204ENST00000542460 DTX4Q9Y2E6 619 aa15.87■□□□□ 0.13
LIG1-204ENST00000542460 PCDHGA9Q9Y5G4 932 aaKnown RBP15.87■□□□□ 0.13
LIG1-204ENST00000542460 A0A096LPI6 279 aa15.86■□□□□ 0.13
LIG1-204ENST00000542460 RNF103-CHMP3A0A140T963 221 aa15.86■□□□□ 0.13
LIG1-204ENST00000542460 CAPN14A8MX76 684 aa15.86■□□□□ 0.13
LIG1-204ENST00000542460 MKRN2OSH3BPM6 223 aa15.86■□□□□ 0.13
LIG1-204ENST00000542460 KCNH1O95259 989 aa15.86■□□□□ 0.13
LIG1-204ENST00000542460 ALPPP05187 535 aa15.86■□□□□ 0.13
LIG1-204ENST00000542460 HMGN2P05204 90 aaKnown RBP15.86■□□□□ 0.13
LIG1-204ENST00000542460 COX4I1P13073 169 aa15.86■□□□□ 0.13
LIG1-204ENST00000542460 PTPN6P29350 595 aa15.86■□□□□ 0.13
LIG1-204ENST00000542460 SOX11P35716 441 aa15.86■□□□□ 0.13
LIG1-204ENST00000542460 PPICP45877 212 aa15.86■□□□□ 0.13
LIG1-204ENST00000542460 MLF1P58340 268 aa15.86■□□□□ 0.13
LIG1-204ENST00000542460 RHDQ02161 417 aa15.86■□□□□ 0.13
LIG1-204ENST00000542460 ZNF155Q12901 538 aaPredicted RBP15.86■□□□□ 0.13
LIG1-204ENST00000542460 MMEL1Q495T6 779 aa15.86■□□□□ 0.13
LIG1-204ENST00000542460 LRIF1Q5T3J3 769 aa15.86■□□□□ 0.13
LIG1-204ENST00000542460 ABHD17BQ5VST6 288 aa15.86■□□□□ 0.13
LIG1-204ENST00000542460 B3GNTL1Q67FW5 361 aaPredicted RBP15.86■□□□□ 0.13
LIG1-204ENST00000542460 FCRLBQ6BAA4 426 aa15.86■□□□□ 0.13
LIG1-204ENST00000542460 ZCCHC12Q6PEW1 402 aa15.86■□□□□ 0.13
LIG1-204ENST00000542460 ISLR2Q6UXK2 745 aa15.86■□□□□ 0.13
LIG1-204ENST00000542460 C6orf120Q7Z4R8 191 aa15.86■□□□□ 0.13
LIG1-204ENST00000542460 ZNF441Q8N8Z8 693 aa15.86■□□□□ 0.13
LIG1-204ENST00000542460 CMTM5Q96DZ9 223 aa15.86■□□□□ 0.13
LIG1-204ENST00000542460 NPAS2Q99743 824 aa15.86■□□□□ 0.13
LIG1-204ENST00000542460 ARHGAP9Q9BRR9 750 aa15.86■□□□□ 0.13
LIG1-204ENST00000542460 ITPAQ9BY32 194 aa15.86■□□□□ 0.13
LIG1-204ENST00000542460 PAIP1Q9H074 479 aaKnown RBP15.86■□□□□ 0.13
LIG1-204ENST00000542460 LIN28AQ9H9Z2 209 aaKnown RBP15.86■□□□□ 0.13
LIG1-204ENST00000542460 EQTNQ9NQ60 294 aa15.86■□□□□ 0.13
LIG1-204ENST00000542460 STMN3Q9NZ72 180 aa15.86■□□□□ 0.13
LIG1-204ENST00000542460 GPR55Q9Y2T6 319 aaPredicted RBP15.86■□□□□ 0.13
LIG1-204ENST00000542460 TTC36A6NLP5 189 aa15.85■□□□□ 0.13
LIG1-204ENST00000542460 WWP2O00308 870 aa15.85■□□□□ 0.13
LIG1-204ENST00000542460 FBP2O00757 339 aa15.85■□□□□ 0.13
LIG1-204ENST00000542460 NME6O75414 186 aaPredicted RBP15.85■□□□□ 0.13
LIG1-204ENST00000542460 DRD5P21918 477 aa15.85■□□□□ 0.13
LIG1-204ENST00000542460 PRDX6P30041 224 aa15.85■□□□□ 0.13
LIG1-204ENST00000542460 CHI3L1P36222 383 aaPredicted RBP15.85■□□□□ 0.13
LIG1-204ENST00000542460 PRIM2P49643 509 aa15.85■□□□□ 0.13
LIG1-204ENST00000542460 GAB1Q13480 694 aa15.85■□□□□ 0.13
LIG1-204ENST00000542460 ZNHIT3Q15649 155 aaPredicted RBP15.85■□□□□ 0.13
LIG1-204ENST00000542460 FAM91A1Q658Y4 838 aa15.85■□□□□ 0.13
LIG1-204ENST00000542460 MFSD12Q6NUT3 480 aa15.85■□□□□ 0.13
LIG1-204ENST00000542460 DNAJC14Q6Y2X3 702 aaPredicted RBP15.85■□□□□ 0.13
LIG1-204ENST00000542460 RETREG3Q86VR2 466 aa15.85■□□□□ 0.13
LIG1-204ENST00000542460 CLEC4FQ8N1N0 589 aa15.85■□□□□ 0.13
LIG1-204ENST00000542460 FITM2Q8N6M3 262 aa15.85■□□□□ 0.13
LIG1-204ENST00000542460 CDRT4Q8N9R6 151 aa15.85■□□□□ 0.13
LIG1-204ENST00000542460 NEURL3Q96EH8 262 aa15.85■□□□□ 0.13
LIG1-204ENST00000542460 LCORQ96JN0 433 aaPredicted RBP15.85■□□□□ 0.13
LIG1-204ENST00000542460 BTBD9Q96Q07 612 aa15.85■□□□□ 0.13
LIG1-204ENST00000542460 LMF1Q96S06 567 aa15.85■□□□□ 0.13
LIG1-204ENST00000542460 SLC6A13Q9NSD5 602 aa15.85■□□□□ 0.13
LIG1-204ENST00000542460 RYDENQ9NUL5 291 aaKnown RBP15.85■□□□□ 0.13
LIG1-204ENST00000542460 GPATCH2Q9NW75 528 aa15.85■□□□□ 0.13
LIG1-204ENST00000542460 SLAMF8Q9P0V8 285 aa15.85■□□□□ 0.13
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms