RNA–Protein interactions for RNA: ENST00000541354.5

SPOCK3-226, Transcript of SPARC (osteonectin), cwcv and kazal like domains proteoglycan 3, humanhuman

TSL 2 BASIC

Gene SPOCK3, Length 2,797 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPOCK3-226ENST00000541354 C6orf120Q7Z4R8 191 aa13.79□□□□□ -0.2
SPOCK3-226ENST00000541354 ARL14Q8N4G2 192 aa13.79□□□□□ -0.2
SPOCK3-226ENST00000541354 DEFB123Q8N688 67 aa13.79□□□□□ -0.2
SPOCK3-226ENST00000541354 C9orf43Q8TAL5 461 aaPredicted RBP13.79□□□□□ -0.2
SPOCK3-226ENST00000541354 ZNF681Q96N22 645 aa13.79□□□□□ -0.2
SPOCK3-226ENST00000541354 COL21A1Q96P44 957 aa13.79□□□□□ -0.2
SPOCK3-226ENST00000541354 SPATA5L1Q9BVQ7 753 aa13.79□□□□□ -0.2
SPOCK3-226ENST00000541354 NXF2Q9GZY0 626 aaKnown RBP13.79□□□□□ -0.2
SPOCK3-226ENST00000541354 CNOT2Q9NZN8 540 aaKnown RBP13.79□□□□□ -0.2
SPOCK3-226ENST00000541354 FTSJ1Q9UET6 329 aa13.79□□□□□ -0.2
SPOCK3-226ENST00000541354 MAP4K5Q9Y4K4 846 aa13.79□□□□□ -0.2
SPOCK3-226ENST00000541354 ATG4BQ9Y4P1 393 aa13.79□□□□□ -0.2
SPOCK3-226ENST00000541354 FUOMA2VDF0 154 aa13.78□□□□□ -0.2
SPOCK3-226ENST00000541354 ZAR1LA6NP61 321 aa13.78□□□□□ -0.2
SPOCK3-226ENST00000541354 EMC8O43402 210 aa13.78□□□□□ -0.2
SPOCK3-226ENST00000541354 UBXN7O94888 489 aa13.78□□□□□ -0.2
SPOCK3-226ENST00000541354 CCNB2O95067 398 aa13.78□□□□□ -0.2
SPOCK3-226ENST00000541354 NADKO95544 446 aaPredicted RBP13.78□□□□□ -0.2
SPOCK3-226ENST00000541354 OR1E2P47887 323 aa13.78□□□□□ -0.2
SPOCK3-226ENST00000541354 VBP1P61758 197 aa13.78□□□□□ -0.2
SPOCK3-226ENST00000541354 INAVAQ3KP66 663 aa13.78□□□□□ -0.2
SPOCK3-226ENST00000541354 ANGPTL8Q6UXH0 198 aa13.78□□□□□ -0.2
SPOCK3-226ENST00000541354 CCDC81Q6ZN84 652 aa13.78□□□□□ -0.2
SPOCK3-226ENST00000541354 USP53Q70EK8 1073 aa13.78□□□□□ -0.2
SPOCK3-226ENST00000541354 SLC46A3Q7Z3Q1 461 aa13.78□□□□□ -0.2
SPOCK3-226ENST00000541354 ZNF438Q7Z4V0 828 aa13.78□□□□□ -0.2
SPOCK3-226ENST00000541354 TMCO5AQ8N6Q1 288 aa13.78□□□□□ -0.2
SPOCK3-226ENST00000541354 EXOSC8Q96B26 276 aaKnown RBP13.78□□□□□ -0.2
SPOCK3-226ENST00000541354 C10orf90Q96M02 699 aa13.78□□□□□ -0.2
SPOCK3-226ENST00000541354 ALPK1Q96QP1 1244 aa13.78□□□□□ -0.2
SPOCK3-226ENST00000541354 ZNF556Q9HAH1 456 aa13.78□□□□□ -0.2
SPOCK3-226ENST00000541354 PRMT8Q9NR22 394 aaPredicted RBP13.78□□□□□ -0.2
SPOCK3-226ENST00000541354 CACNA1IQ9P0X4 2223 aa13.78□□□□□ -0.2
SPOCK3-226ENST00000541354 H0YGG7 62 aa13.78□□□□□ -0.2
SPOCK3-226ENST00000541354 SCAMP1O15126 338 aa13.78□□□□□ -0.2
SPOCK3-226ENST00000541354 MAN1A2O60476 641 aa13.78□□□□□ -0.2
SPOCK3-226ENST00000541354 ZNF888P0CJ79 500 aaPredicted RBP13.78□□□□□ -0.2
SPOCK3-226ENST00000541354 TNFRSF1BP20333 461 aa13.78□□□□□ -0.2
SPOCK3-226ENST00000541354 ARF3P61204 181 aaPredicted RBP13.78□□□□□ -0.2
SPOCK3-226ENST00000541354 BTN3A2P78410 334 aa13.78□□□□□ -0.2
SPOCK3-226ENST00000541354 SPDYE7PQ495Y7 208 aa13.78□□□□□ -0.2
SPOCK3-226ENST00000541354 FAM160A2Q8N612 972 aaPredicted RBP13.78□□□□□ -0.2
SPOCK3-226ENST00000541354 C19orf47Q8N9M1 422 aaKnown RBP13.78□□□□□ -0.2
SPOCK3-226ENST00000541354 OR10G6Q8NH81 332 aa13.78□□□□□ -0.2
SPOCK3-226ENST00000541354 BBS10Q8TAM1 723 aa13.78□□□□□ -0.2
SPOCK3-226ENST00000541354 NR4A3Q92570 626 aa13.78□□□□□ -0.2
SPOCK3-226ENST00000541354 PMM1Q92871 262 aa13.78□□□□□ -0.2
SPOCK3-226ENST00000541354 SLC35G5Q96KT7 338 aa13.78□□□□□ -0.2
SPOCK3-226ENST00000541354 CDCA4Q9BXL8 241 aa13.78□□□□□ -0.2
SPOCK3-226ENST00000541354 CALML5Q9NZT1 146 aa13.78□□□□□ -0.2
SPOCK3-226ENST00000541354 P2RX2Q9UBL9 471 aa13.78□□□□□ -0.2
SPOCK3-226ENST00000541354 FAM32AQ9Y421 112 aaKnown RBP13.78□□□□□ -0.2
SPOCK3-226ENST00000541354 LAMA2P24043 3122 aaKnown RBP13.78□□□□□ -0.2
SPOCK3-226ENST00000541354 PCDH17O14917 1159 aa13.77□□□□□ -0.2
SPOCK3-226ENST00000541354 MFN2O95140 757 aa13.77□□□□□ -0.2
SPOCK3-226ENST00000541354 GADD45GO95257 159 aa13.77□□□□□ -0.2
SPOCK3-226ENST00000541354 IFNW1P05000 195 aa13.77□□□□□ -0.2
SPOCK3-226ENST00000541354 CERS1P27544 350 aa13.77□□□□□ -0.2
SPOCK3-226ENST00000541354 PPP2R1BP30154 601 aa13.77□□□□□ -0.2
SPOCK3-226ENST00000541354 LIPAP38571 399 aa13.77□□□□□ -0.2
SPOCK3-226ENST00000541354 BCAP31P51572 246 aa13.77□□□□□ -0.2
SPOCK3-226ENST00000541354 NCS1P62166 190 aa13.77□□□□□ -0.2
SPOCK3-226ENST00000541354 BIKQ13323 160 aa13.77□□□□□ -0.2
SPOCK3-226ENST00000541354 ITGADQ13349 1161 aa13.77□□□□□ -0.2
SPOCK3-226ENST00000541354 PUM1Q14671 1186 aaKnown RBP eCLIP13.77□□□□□ -0.2
SPOCK3-226ENST00000541354 C14orf28Q4W4Y0 310 aa13.77□□□□□ -0.2
SPOCK3-226ENST00000541354 C19orf48Q6RUI8 117 aa13.77□□□□□ -0.2
SPOCK3-226ENST00000541354 Q6ZPB1 254 aaPredicted RBP13.77□□□□□ -0.2
SPOCK3-226ENST00000541354 MED25Q71SY5 747 aa13.77□□□□□ -0.2
SPOCK3-226ENST00000541354 HSPA12BQ96MM6 686 aa13.77□□□□□ -0.2
SPOCK3-226ENST00000541354 ALOXE3Q9BYJ1 711 aa13.77□□□□□ -0.2
SPOCK3-226ENST00000541354 EVA1AQ9H8M9 152 aa13.77□□□□□ -0.2
SPOCK3-226ENST00000541354 PTGFRNQ9P2B2 879 aa13.77□□□□□ -0.2
SPOCK3-226ENST00000541354 ACAD8Q9UKU7 415 aa13.77□□□□□ -0.2
SPOCK3-226ENST00000541354 DAPP1Q9UN19 280 aa13.77□□□□□ -0.2
SPOCK3-226ENST00000541354 DOLKQ9UPQ8 538 aa13.77□□□□□ -0.2
SPOCK3-226ENST00000541354 LIPT1Q9Y234 373 aa13.77□□□□□ -0.2
SPOCK3-226ENST00000541354 EFCAB9A8MZ26 197 aa13.77□□□□□ -0.21
SPOCK3-226ENST00000541354 OXSR1O95747 527 aaPredicted RBP13.77□□□□□ -0.21
SPOCK3-226ENST00000541354 GUSBP08236 651 aa13.77□□□□□ -0.21
SPOCK3-226ENST00000541354 PIPP12273 146 aaPredicted RBP13.77□□□□□ -0.21
SPOCK3-226ENST00000541354 GPR3P46089 330 aa13.77□□□□□ -0.21
SPOCK3-226ENST00000541354 CD97P48960 835 aa13.77□□□□□ -0.21
SPOCK3-226ENST00000541354 NCBP2P52298 156 aaKnown RBP eCLIP13.77□□□□□ -0.21
SPOCK3-226ENST00000541354 MAPK11Q15759 364 aa13.77□□□□□ -0.21
SPOCK3-226ENST00000541354 NDUFA9Q16795 377 aa13.77□□□□□ -0.21
SPOCK3-226ENST00000541354 TUBA3EQ6PEY2 450 aa13.77□□□□□ -0.21
SPOCK3-226ENST00000541354 ARHGEF39Q8N4T4 335 aa13.77□□□□□ -0.21
SPOCK3-226ENST00000541354 AMER3Q8N944 861 aa13.77□□□□□ -0.21
SPOCK3-226ENST00000541354 OR5AK3PQ8NH89 298 aa13.77□□□□□ -0.21
SPOCK3-226ENST00000541354 LMX1AQ8TE12 382 aa13.77□□□□□ -0.21
SPOCK3-226ENST00000541354 SLC38A5Q8WUX1 472 aa13.77□□□□□ -0.21
SPOCK3-226ENST00000541354 JPH3Q8WXH2 748 aaPredicted RBP13.77□□□□□ -0.21
SPOCK3-226ENST00000541354 ZNF607Q96SK3 696 aa13.77□□□□□ -0.21
SPOCK3-226ENST00000541354 MMP27Q9H306 513 aa13.77□□□□□ -0.21
SPOCK3-226ENST00000541354 EVA1BQ9NVM1 165 aa13.77□□□□□ -0.21
SPOCK3-226ENST00000541354 SEMA5BQ9P283 1151 aa13.77□□□□□ -0.21
SPOCK3-226ENST00000541354 MDC1Q14676 2089 aaKnown RBP13.77□□□□□ -0.21
SPOCK3-226ENST00000541354 YKT6O15498 198 aa13.77□□□□□ -0.21
SPOCK3-226ENST00000541354 PIAS2O75928 621 aa13.77□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 37.1 ms