RNA–Protein interactions for RNA: ENST00000540783.5

RAPGEF4-215, Transcript of Rap guanine nucleotide exchange factor 4, human

TSL 2 BASIC

Gene RAPGEF4, Length 3,974 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
RAPGEF4-215	ENST00000540783	GPC1	P35052	558 aa		5.36	□□□□□ -1.55
RAPGEF4-215	ENST00000540783	ETV6	P41212	452 aa		5.36	□□□□□ -1.55
RAPGEF4-215	ENST00000540783	RORC	P51449	518 aa		5.36	□□□□□ -1.55
RAPGEF4-215	ENST00000540783	LIMK1	P53667	647 aa		5.36	□□□□□ -1.55
RAPGEF4-215	ENST00000540783	AP1S2	P56377	157 aa		5.36	□□□□□ -1.55
RAPGEF4-215	ENST00000540783	OLR1	P78380	273 aa		5.36	□□□□□ -1.55
RAPGEF4-215	ENST00000540783	SPEM2	Q0P670	501 aa		5.36	□□□□□ -1.55
RAPGEF4-215	ENST00000540783	SP140	Q13342	867 aa		5.36	□□□□□ -1.55
RAPGEF4-215	ENST00000540783	DUSP7	Q16829	419 aa		5.36	□□□□□ -1.55
RAPGEF4-215	ENST00000540783	WSCD2	Q2TBF2	565 aa		5.36	□□□□□ -1.55
RAPGEF4-215	ENST00000540783	COX20	Q5RI15	118 aa		5.36	□□□□□ -1.55
RAPGEF4-215	ENST00000540783	PRAMEF9	Q5VWM5	478 aa		5.36	□□□□□ -1.55
RAPGEF4-215	ENST00000540783	C22orf42	Q6IC83	251 aa		5.36	□□□□□ -1.55
RAPGEF4-215	ENST00000540783	FAM180B	Q6P0A1	224 aa		5.36	□□□□□ -1.55
RAPGEF4-215	ENST00000540783	C17orf64	Q86WR6	236 aa		5.36	□□□□□ -1.55
RAPGEF4-215	ENST00000540783	FAM9C	Q8IZT9	166 aa		5.36	□□□□□ -1.55
RAPGEF4-215	ENST00000540783	ZDHHC1	Q8WTX9	485 aa		5.36	□□□□□ -1.55
RAPGEF4-215	ENST00000540783	ZFPM2	Q8WW38	1151 aa		5.36	□□□□□ -1.55
RAPGEF4-215	ENST00000540783	RASSF5	Q8WWW0	418 aa		5.36	□□□□□ -1.55
RAPGEF4-215	ENST00000540783	USP7	Q93009	1102 aa		5.36	□□□□□ -1.55
RAPGEF4-215	ENST00000540783	ECHDC3	Q96DC8	303 aa		5.36	□□□□□ -1.55
RAPGEF4-215	ENST00000540783	QRFPR	Q96P65	431 aa		5.36	□□□□□ -1.55
RAPGEF4-215	ENST00000540783	RNF121	Q9H920	327 aa		5.36	□□□□□ -1.55
RAPGEF4-215	ENST00000540783	PLCXD1	Q9NUJ7	323 aa		5.36	□□□□□ -1.55
RAPGEF4-215	ENST00000540783	FKBP14	Q9NWM8	211 aa		5.36	□□□□□ -1.55
RAPGEF4-215	ENST00000540783	SH3BP4	Q9P0V3	963 aa		5.36	□□□□□ -1.55
RAPGEF4-215	ENST00000540783	NLK	Q9UBE8	527 aa		5.36	□□□□□ -1.55
RAPGEF4-215	ENST00000540783	EPHA6	Q9UF33	1036 aa		5.36	□□□□□ -1.55
RAPGEF4-215	ENST00000540783	SLC22A14	Q9Y267	594 aa		5.36	□□□□□ -1.55
RAPGEF4-215	ENST00000540783	AP3M1	Q9Y2T2	418 aa		5.36	□□□□□ -1.55
RAPGEF4-215	ENST00000540783	OARD1	Q9Y530	152 aa		5.36	□□□□□ -1.55
RAPGEF4-215	ENST00000540783	ENTPD2	Q9Y5L3	495 aa		5.36	□□□□□ -1.55
RAPGEF4-215	ENST00000540783		A0A1W2PQF6	199 aa		5.36	□□□□□ -1.55
RAPGEF4-215	ENST00000540783	OTOL1	A6NHN0	477 aa	Predicted RBP	5.36	□□□□□ -1.55
RAPGEF4-215	ENST00000540783	PLA2G10	O15496	165 aa		5.36	□□□□□ -1.55
RAPGEF4-215	ENST00000540783	ARHGEF9	O43307	516 aa		5.36	□□□□□ -1.55
RAPGEF4-215	ENST00000540783	GABRB1	P18505	474 aa		5.36	□□□□□ -1.55
RAPGEF4-215	ENST00000540783	MAN2A2	P49641	1150 aa		5.36	□□□□□ -1.55
RAPGEF4-215	ENST00000540783	WNT3	P56703	355 aa		5.36	□□□□□ -1.55
RAPGEF4-215	ENST00000540783	PSPH	P78330	225 aa		5.36	□□□□□ -1.55
RAPGEF4-215	ENST00000540783	RGS1	Q08116	209 aa		5.36	□□□□□ -1.55
RAPGEF4-215	ENST00000540783	ABR	Q12979	859 aa		5.36	□□□□□ -1.55
RAPGEF4-215	ENST00000540783	GAB1	Q13480	694 aa		5.36	□□□□□ -1.55
RAPGEF4-215	ENST00000540783	QPRT	Q15274	297 aa		5.36	□□□□□ -1.55
RAPGEF4-215	ENST00000540783	CSRP2	Q16527	193 aa		5.36	□□□□□ -1.55
RAPGEF4-215	ENST00000540783	TATDN3	Q17R31	274 aa		5.36	□□□□□ -1.55
RAPGEF4-215	ENST00000540783	PHF19	Q5T6S3	580 aa		5.36	□□□□□ -1.55
RAPGEF4-215	ENST00000540783	PXDC1	Q5TGL8	231 aa		5.36	□□□□□ -1.55
RAPGEF4-215	ENST00000540783	TMEM215	Q68D42	235 aa		5.36	□□□□□ -1.55
RAPGEF4-215	ENST00000540783	ZNF367	Q7RTV3	350 aa		5.36	□□□□□ -1.55
RAPGEF4-215	ENST00000540783	HSD11B1L	Q7Z5J1	315 aa		5.36	□□□□□ -1.55
RAPGEF4-215	ENST00000540783	BPHL	Q86WA6	291 aa	Predicted RBP	5.36	□□□□□ -1.55
RAPGEF4-215	ENST00000540783	TIGD4	Q8IY51	512 aa		5.36	□□□□□ -1.55
RAPGEF4-215	ENST00000540783	FAM109A	Q8N4B1	249 aa		5.36	□□□□□ -1.55
RAPGEF4-215	ENST00000540783	SYT14	Q8NB59	555 aa		5.36	□□□□□ -1.55
RAPGEF4-215	ENST00000540783	ZSCAN1	Q8NBB4	408 aa		5.36	□□□□□ -1.55
RAPGEF4-215	ENST00000540783	OR4K1	Q8NGD4	311 aa		5.36	□□□□□ -1.55
RAPGEF4-215	ENST00000540783	SMPDL3A	Q92484	453 aa		5.36	□□□□□ -1.55
RAPGEF4-215	ENST00000540783	TFG	Q92734	400 aa	Predicted RBP	5.36	□□□□□ -1.55
RAPGEF4-215	ENST00000540783	EPYC	Q99645	322 aa		5.36	□□□□□ -1.55
RAPGEF4-215	ENST00000540783	ZNF556	Q9HAH1	456 aa		5.36	□□□□□ -1.55
RAPGEF4-215	ENST00000540783	SEMA4G	Q9NTN9	838 aa		5.36	□□□□□ -1.55
RAPGEF4-215	ENST00000540783	POT1	Q9NUX5	634 aa		5.36	□□□□□ -1.55
RAPGEF4-215	ENST00000540783	COMMD3	Q9UBI1	195 aa		5.36	□□□□□ -1.55
RAPGEF4-215	ENST00000540783	ACSL6	Q9UKU0	697 aa		5.36	□□□□□ -1.55
RAPGEF4-215	ENST00000540783	KCNK6	Q9Y257	313 aa		5.36	□□□□□ -1.55
RAPGEF4-215	ENST00000540783	CMAHP	Q9Y471	501 aa		5.36	□□□□□ -1.55
RAPGEF4-215	ENST00000540783		C9J4A7	227 aa		5.36	□□□□□ -1.55
RAPGEF4-215	ENST00000540783	SCN2B	O60939	215 aa		5.36	□□□□□ -1.55
RAPGEF4-215	ENST00000540783	NOS1AP	O75052	506 aa	Predicted RBP	5.36	□□□□□ -1.55
RAPGEF4-215	ENST00000540783	OR2B3	O76000	313 aa		5.36	□□□□□ -1.55
RAPGEF4-215	ENST00000540783	CCNB2	O95067	398 aa		5.36	□□□□□ -1.55
RAPGEF4-215	ENST00000540783	SERPIND1	P05546	499 aa		5.36	□□□□□ -1.55
RAPGEF4-215	ENST00000540783	CD63	P08962	238 aa		5.36	□□□□□ -1.55
RAPGEF4-215	ENST00000540783	GPX2	P18283	190 aa		5.36	□□□□□ -1.55
RAPGEF4-215	ENST00000540783	ACRV1	P26436	265 aa		5.36	□□□□□ -1.55
RAPGEF4-215	ENST00000540783	NOVA1	P51513	510 aa	Known RBP	5.36	□□□□□ -1.55
RAPGEF4-215	ENST00000540783	CLDN2	P57739	230 aa		5.36	□□□□□ -1.55
RAPGEF4-215	ENST00000540783	HKDC1	Q2TB90	917 aa		5.36	□□□□□ -1.55
RAPGEF4-215	ENST00000540783	TIMM50	Q3ZCQ8	353 aa		5.36	□□□□□ -1.55
RAPGEF4-215	ENST00000540783	SPDYE7P	Q495Y7	208 aa		5.36	□□□□□ -1.55
RAPGEF4-215	ENST00000540783	SAXO2	Q658L1	398 aa		5.36	□□□□□ -1.55
RAPGEF4-215	ENST00000540783	PLAG1	Q6DJT9	500 aa		5.36	□□□□□ -1.55
RAPGEF4-215	ENST00000540783	UNC5D	Q6UXZ4	953 aa		5.36	□□□□□ -1.55
RAPGEF4-215	ENST00000540783	UBE2R2	Q712K3	238 aa	Predicted RBP	5.36	□□□□□ -1.55
RAPGEF4-215	ENST00000540783	TSPAN33	Q86UF1	283 aa		5.36	□□□□□ -1.55
RAPGEF4-215	ENST00000540783	RNF130	Q86XS8	419 aa		5.36	□□□□□ -1.55
RAPGEF4-215	ENST00000540783	VWA5B2	Q8N398	1253 aa		5.36	□□□□□ -1.55
RAPGEF4-215	ENST00000540783	SPERT	Q8NA61	448 aa		5.36	□□□□□ -1.55
RAPGEF4-215	ENST00000540783	AQP11	Q8NBQ7	271 aa		5.36	□□□□□ -1.55
RAPGEF4-215	ENST00000540783	SRFBP1	Q8NEF9	429 aa	Known RBP	5.36	□□□□□ -1.55
RAPGEF4-215	ENST00000540783	ATP6V1C2	Q8NEY4	427 aa		5.36	□□□□□ -1.55
RAPGEF4-215	ENST00000540783	OR5AK3P	Q8NH89	298 aa		5.36	□□□□□ -1.55
RAPGEF4-215	ENST00000540783	TBC1D20	Q96BZ9	403 aa		5.36	□□□□□ -1.55
RAPGEF4-215	ENST00000540783	CRELD1	Q96HD1	420 aa		5.36	□□□□□ -1.55
RAPGEF4-215	ENST00000540783	DOHH	Q9BU89	302 aa		5.36	□□□□□ -1.55
RAPGEF4-215	ENST00000540783	NTMT1	Q9BV86	223 aa		5.36	□□□□□ -1.55
RAPGEF4-215	ENST00000540783	POLR2J2	Q9GZM3	115 aa	Known RBP	5.36	□□□□□ -1.55
RAPGEF4-215	ENST00000540783	SLC6A17	Q9H1V8	727 aa		5.36	□□□□□ -1.55
RAPGEF4-215	ENST00000540783	MIXL1	Q9H2W2	232 aa		5.36	□□□□□ -1.55

Retrieved 100 of 20,778 RNA–protein pairs in 48 ms