RNA–Protein interactions for RNA: ENST00000540159.3

BNIP3-202, Transcript of BCL2 interacting protein 3, humanhuman

TSL 1 (best)

Gene BNIP3, Length 3,066 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BNIP3-202ENST00000540159 KCND3Q9UK17 655 aa12.87□□□□□ -0.35
BNIP3-202ENST00000540159 KIAA1549LQ6ZVL6 1849 aa12.87□□□□□ -0.35
BNIP3-202ENST00000540159 ARHGEF17Q96PE2 2063 aaPredicted RBP12.87□□□□□ -0.35
BNIP3-202ENST00000540159 NPIPA5A0A0B4J1W7 369 aa12.87□□□□□ -0.35
BNIP3-202ENST00000540159 A0A1W2PQ09 198 aa12.87□□□□□ -0.35
BNIP3-202ENST00000540159 ISM1B1AKI9 464 aa12.87□□□□□ -0.35
BNIP3-202ENST00000540159 NPIPA7E9PJI5 369 aa12.87□□□□□ -0.35
BNIP3-202ENST00000540159 TAF4O00268 1085 aa12.87□□□□□ -0.35
BNIP3-202ENST00000540159 TSPAN19P0C672 248 aa12.87□□□□□ -0.35
BNIP3-202ENST00000540159 NPIPA8P0DM63 369 aa12.87□□□□□ -0.35
BNIP3-202ENST00000540159 DRD3P35462 400 aa12.87□□□□□ -0.35
BNIP3-202ENST00000540159 ATP6V1E1P36543 226 aa12.87□□□□□ -0.35
BNIP3-202ENST00000540159 GIPRP48546 466 aa12.87□□□□□ -0.35
BNIP3-202ENST00000540159 TAS2R38P59533 333 aa12.87□□□□□ -0.35
BNIP3-202ENST00000540159 RUNX1T1Q06455 604 aa12.87□□□□□ -0.35
BNIP3-202ENST00000540159 ZNF791Q3KP31 576 aaPredicted RBP12.87□□□□□ -0.35
BNIP3-202ENST00000540159 C6orf132Q5T0Z8 1188 aa12.87□□□□□ -0.35
BNIP3-202ENST00000540159 RRM2BQ7LG56 351 aa12.87□□□□□ -0.35
BNIP3-202ENST00000540159 KIF18BQ86Y91 864 aa12.87□□□□□ -0.35
BNIP3-202ENST00000540159 ETFBKMTQ8IXQ9 262 aa12.87□□□□□ -0.35
BNIP3-202ENST00000540159 BBS1Q8NFJ9 593 aa12.87□□□□□ -0.35
BNIP3-202ENST00000540159 OR4E2Q8NGC2 313 aa12.87□□□□□ -0.35
BNIP3-202ENST00000540159 OR52I1Q8NGK6 324 aa12.87□□□□□ -0.35
BNIP3-202ENST00000540159 TP53INP1Q96A56 240 aa12.87□□□□□ -0.35
BNIP3-202ENST00000540159 DIRAS2Q96HU8 199 aa12.87□□□□□ -0.35
BNIP3-202ENST00000540159 NECTIN4Q96NY8 510 aa12.87□□□□□ -0.35
BNIP3-202ENST00000540159 FAM83CQ9BQN1 747 aa12.87□□□□□ -0.35
BNIP3-202ENST00000540159 WDR26Q9H7D7 661 aa12.87□□□□□ -0.35
BNIP3-202ENST00000540159 MAN2C1Q9NTJ4 1040 aa12.87□□□□□ -0.35
BNIP3-202ENST00000540159 NFKBIL1Q9UBC1 381 aaPredicted RBP12.87□□□□□ -0.35
BNIP3-202ENST00000540159 KLHL3Q9UH77 587 aa12.87□□□□□ -0.35
BNIP3-202ENST00000540159 HCN2Q9UL51 889 aa12.87□□□□□ -0.35
BNIP3-202ENST00000540159 KLK4Q9Y5K2 254 aa12.87□□□□□ -0.35
BNIP3-202ENST00000540159 CSNK1G3Q9Y6M4 447 aa12.87□□□□□ -0.35
BNIP3-202ENST00000540159 GSAPA4D1B5 854 aa12.86□□□□□ -0.35
BNIP3-202ENST00000540159 SAGE2PA6NJ88 616 aa12.86□□□□□ -0.35
BNIP3-202ENST00000540159 PIP5K1CO60331 668 aa12.86□□□□□ -0.35
BNIP3-202ENST00000540159 DNAJB6O75190 326 aa12.86□□□□□ -0.35
BNIP3-202ENST00000540159 SCG5P05408 212 aa12.86□□□□□ -0.35
BNIP3-202ENST00000540159 ILKQ13418 452 aa12.86□□□□□ -0.35
BNIP3-202ENST00000540159 FGL2Q14314 439 aa12.86□□□□□ -0.35
BNIP3-202ENST00000540159 MLIPQ5VWP3 458 aa12.86□□□□□ -0.35
BNIP3-202ENST00000540159 METRNLQ641Q3 311 aa12.86□□□□□ -0.35
BNIP3-202ENST00000540159 UNC5DQ6UXZ4 953 aa12.86□□□□□ -0.35
BNIP3-202ENST00000540159 PRICKLE2Q7Z3G6 844 aa12.86□□□□□ -0.35
BNIP3-202ENST00000540159 OR8D4Q8NGM9 314 aa12.86□□□□□ -0.35
BNIP3-202ENST00000540159 SETD7Q8WTS6 366 aaKnown RBP12.86□□□□□ -0.35
BNIP3-202ENST00000540159 MTERF3Q96E29 417 aa12.86□□□□□ -0.35
BNIP3-202ENST00000540159 ZNF514Q96K75 400 aaPredicted RBP12.86□□□□□ -0.35
BNIP3-202ENST00000540159 NELL2Q99435 816 aa12.86□□□□□ -0.35
BNIP3-202ENST00000540159 SLC25A19Q9HC21 320 aa12.86□□□□□ -0.35
BNIP3-202ENST00000540159 MARK1Q9P0L2 795 aa12.86□□□□□ -0.35
BNIP3-202ENST00000540159 A0A087WUU8 490 aa12.86□□□□□ -0.35
BNIP3-202ENST00000540159 C2orf92A0A1B0GVN3 265 aa12.86□□□□□ -0.35
BNIP3-202ENST00000540159 A0A1W2PQL4 384 aaPredicted RBP12.86□□□□□ -0.35
BNIP3-202ENST00000540159 LRIT2A6NDA9 550 aa12.86□□□□□ -0.35
BNIP3-202ENST00000540159 FAAHO00519 579 aa12.86□□□□□ -0.35
BNIP3-202ENST00000540159 TMCC2O75069 709 aa12.86□□□□□ -0.35
BNIP3-202ENST00000540159 TP53P04637 393 aaPredicted RBP12.86□□□□□ -0.35
BNIP3-202ENST00000540159 DDX6P26196 483 aaKnown RBP eCLIP12.86□□□□□ -0.35
BNIP3-202ENST00000540159 AK4P27144 223 aaPredicted RBP12.86□□□□□ -0.35
BNIP3-202ENST00000540159 TIE1P35590 1138 aa12.86□□□□□ -0.35
BNIP3-202ENST00000540159 DEFA1P59665 94 aa12.86□□□□□ -0.35
BNIP3-202ENST00000540159 DEFA3P59666 94 aa12.86□□□□□ -0.35
BNIP3-202ENST00000540159 PRKCDQ05655 676 aa12.86□□□□□ -0.35
BNIP3-202ENST00000540159 C1DQ13901 141 aaKnown RBP12.86□□□□□ -0.35
BNIP3-202ENST00000540159 IRF4Q15306 451 aa12.86□□□□□ -0.35
BNIP3-202ENST00000540159 GAB4Q2WGN9 574 aa12.86□□□□□ -0.35
BNIP3-202ENST00000540159 TIMM50Q3ZCQ8 353 aa12.86□□□□□ -0.35
BNIP3-202ENST00000540159 SLC35F1Q5T1Q4 408 aa12.86□□□□□ -0.35
BNIP3-202ENST00000540159 SLX4IPQ5VYV7 408 aa12.86□□□□□ -0.35
BNIP3-202ENST00000540159 TANGO2Q6ICL3 276 aa12.86□□□□□ -0.35
BNIP3-202ENST00000540159 ZNF730Q6ZMV8 503 aa12.86□□□□□ -0.35
BNIP3-202ENST00000540159 IKBIPQ70UQ0 350 aa12.86□□□□□ -0.35
BNIP3-202ENST00000540159 NKAIN4Q8IVV8 208 aa12.86□□□□□ -0.35
BNIP3-202ENST00000540159 SLC30A8Q8IWU4 369 aa12.86□□□□□ -0.35
BNIP3-202ENST00000540159 TBC1D19Q8N5T2 526 aa12.86□□□□□ -0.35
BNIP3-202ENST00000540159 FBXO15Q8NCQ5 510 aaPredicted RBP12.86□□□□□ -0.35
BNIP3-202ENST00000540159 OR8J1Q8NGP2 316 aa12.86□□□□□ -0.35
BNIP3-202ENST00000540159 OR2A1Q8NGT9 310 aa12.86□□□□□ -0.35
BNIP3-202ENST00000540159 OR14C36Q8NHC7 312 aa12.86□□□□□ -0.35
BNIP3-202ENST00000540159 UBASH3BQ8TF42 649 aa12.86□□□□□ -0.35
BNIP3-202ENST00000540159 TTYH2Q9BSA4 534 aa12.86□□□□□ -0.35
BNIP3-202ENST00000540159 TP63Q9H3D4 680 aaPredicted RBP12.86□□□□□ -0.35
BNIP3-202ENST00000540159 EPHX3Q9H6B9 360 aa12.86□□□□□ -0.35
BNIP3-202ENST00000540159 CPNE5Q9HCH3 593 aa12.86□□□□□ -0.35
BNIP3-202ENST00000540159 A4GALTQ9NPC4 353 aa12.86□□□□□ -0.35
BNIP3-202ENST00000540159 SSR3Q9UNL2 185 aa12.86□□□□□ -0.35
BNIP3-202ENST00000540159 GPR34Q9UPC5 381 aa12.86□□□□□ -0.35
BNIP3-202ENST00000540159 MGAT4BQ9UQ53 548 aa12.86□□□□□ -0.35
BNIP3-202ENST00000540159 PCDHGA4Q9Y5G9 962 aa12.86□□□□□ -0.35
BNIP3-202ENST00000540159 PTPRSQ13332 1948 aa12.86□□□□□ -0.35
BNIP3-202ENST00000540159 FAM170BA6NMN3 283 aa12.85□□□□□ -0.35
BNIP3-202ENST00000540159 MRPS14O60783 128 aaKnown RBP12.85□□□□□ -0.35
BNIP3-202ENST00000540159 AIFM1O95831 613 aa12.85□□□□□ -0.35
BNIP3-202ENST00000540159 GNSP15586 552 aa12.85□□□□□ -0.35
BNIP3-202ENST00000540159 TRHRP34981 398 aaPredicted RBP12.85□□□□□ -0.35
BNIP3-202ENST00000540159 RAB25P57735 213 aa12.85□□□□□ -0.35
BNIP3-202ENST00000540159 ZNF79Q15937 498 aa12.85□□□□□ -0.35
BNIP3-202ENST00000540159 ZNF311Q5JNZ3 666 aa12.85□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 97.7 ms