RNA–Protein interactions for RNA: ENST00000540128.1

TRIM65-202, Transcript of tripartite motif containing 65, humanhuman

TSL 3

Gene TRIM65, Length 886 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM65-202ENST00000540128 CPT1CQ8TCG5 803 aa20.38■□□□□ 0.85
TRIM65-202ENST00000540128 TMEM125Q96AQ2 219 aa20.38■□□□□ 0.85
TRIM65-202ENST00000540128 SPACA9Q96E40 222 aaPredicted RBP20.38■□□□□ 0.85
TRIM65-202ENST00000540128 HSPBAP1Q96EW2 488 aa20.38■□□□□ 0.85
TRIM65-202ENST00000540128 LCORQ96JN0 433 aaPredicted RBP20.38■□□□□ 0.85
TRIM65-202ENST00000540128 BTBD9Q96Q07 612 aa20.38■□□□□ 0.85
TRIM65-202ENST00000540128 ITPAQ9BY32 194 aa20.38■□□□□ 0.85
TRIM65-202ENST00000540128 NXF5Q9H1B4 397 aaKnown RBP20.38■□□□□ 0.85
TRIM65-202ENST00000540128 SH2D2AQ9NP31 389 aa20.38■□□□□ 0.85
TRIM65-202ENST00000540128 TAS2R9Q9NYW1 312 aa20.38■□□□□ 0.85
TRIM65-202ENST00000540128 ERVK-11Q9UQG0 969 aa20.38■□□□□ 0.85
TRIM65-202ENST00000540128 A0A1W2PRB8 838 aa20.37■□□□□ 0.85
TRIM65-202ENST00000540128 TCP11X1B4DZS4 312 aa20.37■□□□□ 0.85
TRIM65-202ENST00000540128 ACOX3O15254 700 aa20.37■□□□□ 0.85
TRIM65-202ENST00000540128 DIAPH2O60879 1101 aa20.37■□□□□ 0.85
TRIM65-202ENST00000540128 IDO1P14902 403 aa20.37■□□□□ 0.85
TRIM65-202ENST00000540128 NAGAP17050 411 aa20.37■□□□□ 0.85
TRIM65-202ENST00000540128 CLNS1AP54105 237 aaKnown RBP20.37■□□□□ 0.85
TRIM65-202ENST00000540128 SRSF11Q05519 484 aaKnown RBP20.37■□□□□ 0.85
TRIM65-202ENST00000540128 HSPB3Q12988 150 aa20.37■□□□□ 0.85
TRIM65-202ENST00000540128 LSM12Q3MHD2 195 aaKnown RBP20.37■□□□□ 0.85
TRIM65-202ENST00000540128 PRR30Q53SZ7 412 aaPredicted RBP20.37■□□□□ 0.85
TRIM65-202ENST00000540128 NXNQ6DKJ4 435 aa20.37■□□□□ 0.85
TRIM65-202ENST00000540128 RTL4Q6ZR62 310 aa20.37■□□□□ 0.85
TRIM65-202ENST00000540128 MDGA2Q7Z553 956 aa20.37■□□□□ 0.85
TRIM65-202ENST00000540128 OR5P2Q8WZ92 322 aa20.37■□□□□ 0.85
TRIM65-202ENST00000540128 TAAR6Q96RI8 345 aa20.37■□□□□ 0.85
TRIM65-202ENST00000540128 CCDC28BQ9BUN5 200 aa20.37■□□□□ 0.85
TRIM65-202ENST00000540128 DUSP26Q9BV47 211 aa20.37■□□□□ 0.85
TRIM65-202ENST00000540128 HES7Q9BYE0 225 aa20.37■□□□□ 0.85
TRIM65-202ENST00000540128 CLMPQ9H6B4 373 aa20.37■□□□□ 0.85
TRIM65-202ENST00000540128 TIMMDC1Q9NPL8 285 aa20.37■□□□□ 0.85
TRIM65-202ENST00000540128 MAP10Q9P2G4 905 aa20.37■□□□□ 0.85
TRIM65-202ENST00000540128 NPFFR2Q9Y5X5 522 aa20.37■□□□□ 0.85
TRIM65-202ENST00000540128 COPG1Q9Y678 874 aaKnown RBP20.37■□□□□ 0.85
TRIM65-202ENST00000540128 NUP214P35658 2090 aaPredicted RBP20.36■□□□□ 0.85
TRIM65-202ENST00000540128 ASPDHA6ND91 283 aa20.36■□□□□ 0.85
TRIM65-202ENST00000540128 FRG2CA6NGY1 282 aa20.36■□□□□ 0.85
TRIM65-202ENST00000540128 CDK9P50750 372 aaKnown RBP20.36■□□□□ 0.85
TRIM65-202ENST00000540128 WNT3P56703 355 aa20.36■□□□□ 0.85
TRIM65-202ENST00000540128 PSPHP78330 225 aa20.36■□□□□ 0.85
TRIM65-202ENST00000540128 GSTA3Q16772 222 aa20.36■□□□□ 0.85
TRIM65-202ENST00000540128 ACAD11Q709F0 780 aa20.36■□□□□ 0.85
TRIM65-202ENST00000540128 GALNTL5Q7Z4T8 443 aa20.36■□□□□ 0.85
TRIM65-202ENST00000540128 DNAJB8Q8NHS0 232 aa20.36■□□□□ 0.85
TRIM65-202ENST00000540128 HOXB13Q92826 284 aaPredicted RBP20.36■□□□□ 0.85
TRIM65-202ENST00000540128 MIB2Q96AX9 1013 aa20.36■□□□□ 0.85
TRIM65-202ENST00000540128 CCDC134Q9H6E4 229 aa20.36■□□□□ 0.85
TRIM65-202ENST00000540128 FOLH1BQ9HBA9 442 aa20.36■□□□□ 0.85
TRIM65-202ENST00000540128 KLHL1Q9NR64 748 aa20.36■□□□□ 0.85
TRIM65-202ENST00000540128 SIRT3Q9NTG7 399 aaPredicted RBP20.36■□□□□ 0.85
TRIM65-202ENST00000540128 DDX18Q9NVP1 670 aaKnown RBP20.36■□□□□ 0.85
TRIM65-202ENST00000540128 NTNG1Q9Y2I2 539 aa20.36■□□□□ 0.85
TRIM65-202ENST00000540128 KLF13Q9Y2Y9 288 aaPredicted RBP20.36■□□□□ 0.85
TRIM65-202ENST00000540128 FASNP49327 2511 aaKnown RBP20.36■□□□□ 0.85
TRIM65-202ENST00000540128 SHANK1Q9Y566 2161 aa20.35■□□□□ 0.85
TRIM65-202ENST00000540128 TTC36A6NLP5 189 aa20.35■□□□□ 0.85
TRIM65-202ENST00000540128 CAPN14A8MX76 684 aa20.35■□□□□ 0.85
TRIM65-202ENST00000540128 UBDO15205 165 aa20.35■□□□□ 0.85
TRIM65-202ENST00000540128 SCN2BO60939 215 aa20.35■□□□□ 0.85
TRIM65-202ENST00000540128 RASAL1O95294 804 aa20.35■□□□□ 0.85
TRIM65-202ENST00000540128 CT45A8P0DMV1 189 aa20.35■□□□□ 0.85
TRIM65-202ENST00000540128 CT45A9P0DMV2 189 aa20.35■□□□□ 0.85
TRIM65-202ENST00000540128 PLA2G2AP14555 144 aa20.35■□□□□ 0.85
TRIM65-202ENST00000540128 GPC1P35052 558 aa20.35■□□□□ 0.85
TRIM65-202ENST00000540128 MRPL19P49406 292 aaKnown RBP20.35■□□□□ 0.85
TRIM65-202ENST00000540128 AQP5P55064 265 aa20.35■□□□□ 0.85
TRIM65-202ENST00000540128 NRG3P56975 720 aa20.35■□□□□ 0.85
TRIM65-202ENST00000540128 UFM1P61960 85 aa20.35■□□□□ 0.85
TRIM65-202ENST00000540128 PHC1P78364 1004 aa20.35■□□□□ 0.85
TRIM65-202ENST00000540128 NTRK2Q16620 822 aa20.35■□□□□ 0.85
TRIM65-202ENST00000540128 MAPKAPK3Q16644 382 aa20.35■□□□□ 0.85
TRIM65-202ENST00000540128 DPY19L1Q2PZI1 675 aa20.35■□□□□ 0.85
TRIM65-202ENST00000540128 PGS1Q32NB8 556 aa20.35■□□□□ 0.85
TRIM65-202ENST00000540128 PDCD4Q53EL6 469 aaKnown RBP20.35■□□□□ 0.85
TRIM65-202ENST00000540128 CT45A2Q5DJT8 189 aa20.35■□□□□ 0.85
TRIM65-202ENST00000540128 TMEM198Q66K66 360 aa20.35■□□□□ 0.85
TRIM65-202ENST00000540128 ZNF324BQ6AW86 544 aaPredicted RBP20.35■□□□□ 0.85
TRIM65-202ENST00000540128 PSD4Q8NDX1 1056 aa20.35■□□□□ 0.85
TRIM65-202ENST00000540128 TEX37Q96LM6 180 aa20.35■□□□□ 0.85
TRIM65-202ENST00000540128 TCF7L2Q9NQB0 619 aa20.35■□□□□ 0.85
TRIM65-202ENST00000540128 SDR39U1Q9NRG7 319 aaPredicted RBP20.35■□□□□ 0.85
TRIM65-202ENST00000540128 ASF1BQ9NVP2 202 aa20.35■□□□□ 0.85
TRIM65-202ENST00000540128 RNASET2O00584 256 aaKnown RBP20.34■□□□□ 0.85
TRIM65-202ENST00000540128 EMC8O43402 210 aa20.34■□□□□ 0.85
TRIM65-202ENST00000540128 ERN1O75460 977 aaKnown RBP20.34■□□□□ 0.85
TRIM65-202ENST00000540128 EFNA1P20827 205 aaPredicted RBP20.34■□□□□ 0.85
TRIM65-202ENST00000540128 ABCD3P28288 659 aa20.34■□□□□ 0.85
TRIM65-202ENST00000540128 KIR3DL1P43629 444 aa20.34■□□□□ 0.85
TRIM65-202ENST00000540128 FOXK1P85037 733 aa20.34■□□□□ 0.85
TRIM65-202ENST00000540128 TMEM64Q6YI46 380 aa20.34■□□□□ 0.85
TRIM65-202ENST00000540128 GLB1L3Q8NCI6 653 aaPredicted RBP20.34■□□□□ 0.85
TRIM65-202ENST00000540128 GRHL3Q8TE85 626 aa20.34■□□□□ 0.85
TRIM65-202ENST00000540128 PAQR8Q8TEZ7 354 aa20.34■□□□□ 0.85
TRIM65-202ENST00000540128 FAR1Q8WVX9 515 aa20.34■□□□□ 0.85
TRIM65-202ENST00000540128 EBF4Q9BQW3 602 aa20.34■□□□□ 0.85
TRIM65-202ENST00000540128 SIKE1Q9BRV8 207 aa20.34■□□□□ 0.85
TRIM65-202ENST00000540128 LMF2Q9BU23 707 aaKnown RBP20.34■□□□□ 0.85
TRIM65-202ENST00000540128 TRIM4Q9C037 500 aa20.34■□□□□ 0.85
TRIM65-202ENST00000540128 C3orf14Q9HBI5 128 aa20.34■□□□□ 0.85
Retrieved 100 of 20,778 RNA–protein pairs in 38.9 ms