RNA–Protein interactions for RNA: ENST00000540037.5

SCNN1A-215, Transcript of sodium channel epithelial 1 alpha subunit, humanhuman

TSL 1 (best) BASIC

Gene SCNN1A, Length 3,040 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCNN1A-215ENST00000540037 F2RL3Q96RI0 385 aa13.14□□□□□ -0.31
SCNN1A-215ENST00000540037 FNDC11Q9BVV2 318 aa13.14□□□□□ -0.31
SCNN1A-215ENST00000540037 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP13.14□□□□□ -0.31
SCNN1A-215ENST00000540037 PCDH10Q9P2E7 1040 aa13.14□□□□□ -0.31
SCNN1A-215ENST00000540037 DYRK1BQ9Y463 629 aa13.14□□□□□ -0.31
SCNN1A-215ENST00000540037 PCDHGB7Q9Y5F8 929 aa13.14□□□□□ -0.31
SCNN1A-215ENST00000540037 FOXE1O00358 373 aaPredicted RBP13.13□□□□□ -0.31
SCNN1A-215ENST00000540037 PLPP1O14494 284 aa13.13□□□□□ -0.31
SCNN1A-215ENST00000540037 ZNF250P15622 560 aa13.13□□□□□ -0.31
SCNN1A-215ENST00000540037 PRKACBP22694 351 aa13.13□□□□□ -0.31
SCNN1A-215ENST00000540037 NNMTP40261 264 aa13.13□□□□□ -0.31
SCNN1A-215ENST00000540037 TAP2Q03519 686 aa13.13□□□□□ -0.31
SCNN1A-215ENST00000540037 KLHL22Q53GT1 634 aa13.13□□□□□ -0.31
SCNN1A-215ENST00000540037 ZNF767PQ75MW2 155 aa13.13□□□□□ -0.31
SCNN1A-215ENST00000540037 BBS1Q8NFJ9 593 aa13.13□□□□□ -0.31
SCNN1A-215ENST00000540037 OR6C4Q8NGE1 309 aa13.13□□□□□ -0.31
SCNN1A-215ENST00000540037 RAET1EQ8TD07 263 aa13.13□□□□□ -0.31
SCNN1A-215ENST00000540037 TEFMQ96QE5 360 aaKnown RBP13.13□□□□□ -0.31
SCNN1A-215ENST00000540037 SAP130Q9H0E3 1048 aa13.13□□□□□ -0.31
SCNN1A-215ENST00000540037 A4GALTQ9NPC4 353 aa13.13□□□□□ -0.31
SCNN1A-215ENST00000540037 SIRT3Q9NTG7 399 aaPredicted RBP13.13□□□□□ -0.31
SCNN1A-215ENST00000540037 MYO10Q9HD67 2058 aa13.13□□□□□ -0.31
SCNN1A-215ENST00000540037 ATG13O75143 517 aa13.13□□□□□ -0.31
SCNN1A-215ENST00000540037 SLC43A1O75387 559 aa13.13□□□□□ -0.31
SCNN1A-215ENST00000540037 ABLIM3O94929 683 aa13.13□□□□□ -0.31
SCNN1A-215ENST00000540037 POP4O95707 220 aaKnown RBP13.13□□□□□ -0.31
SCNN1A-215ENST00000540037 RNASE12Q5GAN4 147 aaKnown RBP13.13□□□□□ -0.31
SCNN1A-215ENST00000540037 HENMT1Q5T8I9 393 aaKnown RBP13.13□□□□□ -0.31
SCNN1A-215ENST00000540037 VASNQ6EMK4 673 aa13.13□□□□□ -0.31
SCNN1A-215ENST00000540037 GDPD4Q6W3E5 623 aa13.13□□□□□ -0.31
SCNN1A-215ENST00000540037 ARIH2OSQ8N7S6 290 aa13.13□□□□□ -0.31
SCNN1A-215ENST00000540037 ZNF485Q8NCK3 441 aa13.13□□□□□ -0.31
SCNN1A-215ENST00000540037 ANKK1Q8NFD2 765 aa13.13□□□□□ -0.31
SCNN1A-215ENST00000540037 OR2A12Q8NGT7 310 aa13.13□□□□□ -0.31
SCNN1A-215ENST00000540037 OMA1Q96E52 524 aa13.13□□□□□ -0.31
SCNN1A-215ENST00000540037 IL21Q9HBE4 155 aa13.13□□□□□ -0.31
SCNN1A-215ENST00000540037 EVA1BQ9NVM1 165 aa13.13□□□□□ -0.31
SCNN1A-215ENST00000540037 ACAD8Q9UKU7 415 aa13.13□□□□□ -0.31
SCNN1A-215ENST00000540037 UNC80Q8N2C7 3258 aa13.13□□□□□ -0.31
SCNN1A-215ENST00000540037 PPM1DO15297 605 aa13.13□□□□□ -0.31
SCNN1A-215ENST00000540037 CHP2O43745 196 aa13.13□□□□□ -0.31
SCNN1A-215ENST00000540037 LEFTY1O75610 366 aa13.13□□□□□ -0.31
SCNN1A-215ENST00000540037 ZNF155Q12901 538 aaPredicted RBP13.13□□□□□ -0.31
SCNN1A-215ENST00000540037 SF3A2Q15428 464 aaKnown RBP13.13□□□□□ -0.31
SCNN1A-215ENST00000540037 IDNKQ5T6J7 187 aa13.13□□□□□ -0.31
SCNN1A-215ENST00000540037 ZBTB37Q5TC79 503 aa13.13□□□□□ -0.31
SCNN1A-215ENST00000540037 SLC30A6Q6NXT4 461 aa13.13□□□□□ -0.31
SCNN1A-215ENST00000540037 TMEM91Q6ZNR0 172 aa13.13□□□□□ -0.31
SCNN1A-215ENST00000540037 GAREM2Q75VX8 874 aa13.13□□□□□ -0.31
SCNN1A-215ENST00000540037 IFNL1Q8IU54 200 aa13.13□□□□□ -0.31
SCNN1A-215ENST00000540037 GHDCQ8N2G8 530 aa13.13□□□□□ -0.31
SCNN1A-215ENST00000540037 AMER3Q8N944 861 aa13.13□□□□□ -0.31
SCNN1A-215ENST00000540037 MORN4Q8NDC4 146 aa13.13□□□□□ -0.31
SCNN1A-215ENST00000540037 OR11H7Q8NGC8 314 aa13.13□□□□□ -0.31
SCNN1A-215ENST00000540037 ZFPM2Q8WW38 1151 aa13.13□□□□□ -0.31
SCNN1A-215ENST00000540037 SLC5A11Q8WWX8 675 aa13.13□□□□□ -0.31
SCNN1A-215ENST00000540037 FOPNLQ96NB1 174 aa13.13□□□□□ -0.31
SCNN1A-215ENST00000540037 SMAD5Q99717 465 aaKnown RBP13.13□□□□□ -0.31
SCNN1A-215ENST00000540037 EXTL2Q9UBQ6 330 aa13.13□□□□□ -0.31
SCNN1A-215ENST00000540037 MGAT4AQ9UM21 535 aa13.13□□□□□ -0.31
SCNN1A-215ENST00000540037 TMEM129A0AVI4 362 aa13.12□□□□□ -0.31
SCNN1A-215ENST00000540037 PRODHO43272 600 aa13.12□□□□□ -0.31
SCNN1A-215ENST00000540037 PRKRAO75569 313 aaKnown RBP13.12□□□□□ -0.31
SCNN1A-215ENST00000540037 SLC2A10O95528 541 aa13.12□□□□□ -0.31
SCNN1A-215ENST00000540037 STATHP02808 62 aa13.12□□□□□ -0.31
SCNN1A-215ENST00000540037 SRPRAP08240 638 aaKnown RBP13.12□□□□□ -0.31
SCNN1A-215ENST00000540037 GABRR2P28476 465 aa13.12□□□□□ -0.31
SCNN1A-215ENST00000540037 FGF9P31371 208 aaPredicted RBP13.12□□□□□ -0.31
SCNN1A-215ENST00000540037 SLC1A3P43003 542 aa13.12□□□□□ -0.31
SCNN1A-215ENST00000540037 FAM27D1Q5T7N8 215 aa13.12□□□□□ -0.31
SCNN1A-215ENST00000540037 CD200R1LQ6Q8B3 271 aa13.12□□□□□ -0.31
SCNN1A-215ENST00000540037 NXPE4Q6UWF7 544 aa13.12□□□□□ -0.31
SCNN1A-215ENST00000540037 NPAS4Q8IUM7 802 aa13.12□□□□□ -0.31
SCNN1A-215ENST00000540037 FAM20CQ8IXL6 584 aa13.12□□□□□ -0.31
SCNN1A-215ENST00000540037 SPERTQ8NA61 448 aa13.12□□□□□ -0.31
SCNN1A-215ENST00000540037 IL17RCQ8NAC3 791 aa13.12□□□□□ -0.31
SCNN1A-215ENST00000540037 TRMT2BQ96GJ1 504 aaKnown RBP13.12□□□□□ -0.31
SCNN1A-215ENST00000540037 MS4A3Q96HJ5 214 aa13.12□□□□□ -0.31
SCNN1A-215ENST00000540037 TDP1Q9NUW8 608 aa13.12□□□□□ -0.31
SCNN1A-215ENST00000540037 TRPC4Q9UBN4 977 aa13.12□□□□□ -0.31
SCNN1A-215ENST00000540037 ZNF222Q9UK12 451 aa13.12□□□□□ -0.31
SCNN1A-215ENST00000540037 HS3ST2Q9Y278 367 aa13.12□□□□□ -0.31
SCNN1A-215ENST00000540037 BTN3A3O00478 584 aa13.12□□□□□ -0.31
SCNN1A-215ENST00000540037 ACADMP11310 421 aa13.12□□□□□ -0.31
SCNN1A-215ENST00000540037 CXCL3P19876 107 aa13.12□□□□□ -0.31
SCNN1A-215ENST00000540037 SSTR2P30874 369 aa13.12□□□□□ -0.31
SCNN1A-215ENST00000540037 PRKAG1P54619 331 aa13.12□□□□□ -0.31
SCNN1A-215ENST00000540037 RAB40BQ12829 278 aa13.12□□□□□ -0.31
SCNN1A-215ENST00000540037 GRIN2CQ14957 1233 aa13.12□□□□□ -0.31
SCNN1A-215ENST00000540037 POU4F3Q15319 338 aa13.12□□□□□ -0.31
SCNN1A-215ENST00000540037 ARSIQ5FYB1 569 aa13.12□□□□□ -0.31
SCNN1A-215ENST00000540037 PXDC1Q5TGL8 231 aa13.12□□□□□ -0.31
SCNN1A-215ENST00000540037 RAET1GQ6H3X3 334 aa13.12□□□□□ -0.31
SCNN1A-215ENST00000540037 FAM92BQ6ZTR7 304 aa13.12□□□□□ -0.31
SCNN1A-215ENST00000540037 PRICKLE2Q7Z3G6 844 aa13.12□□□□□ -0.31
SCNN1A-215ENST00000540037 TMCO2Q7Z6W1 182 aaPredicted RBP13.12□□□□□ -0.31
SCNN1A-215ENST00000540037 SLC9B2Q86UD5 537 aa13.12□□□□□ -0.31
SCNN1A-215ENST00000540037 TMEM25Q86YD3 366 aa13.12□□□□□ -0.31
SCNN1A-215ENST00000540037 CYB5D2Q8WUJ1 264 aa13.12□□□□□ -0.31
SCNN1A-215ENST00000540037 TTC9Q92623 222 aa13.12□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 32.9 ms