RNA–Protein interactions for RNA: ENST00000539945.5

MDH1-215, Transcript of malate dehydrogenase 1, humanhuman

TSL 2 BASIC

Gene MDH1, Length 1,443 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MDH1-215ENST00000539945 MS4A4EQ96PG1 132 aa9.05□□□□□ -0.96
MDH1-215ENST00000539945 ZNF347Q96SE7 839 aa9.05□□□□□ -0.96
MDH1-215ENST00000539945 ZNF607Q96SK3 696 aa9.05□□□□□ -0.96
MDH1-215ENST00000539945 TREX2Q9BQ50 279 aaPredicted RBP9.05□□□□□ -0.96
MDH1-215ENST00000539945 OSBPL10Q9BXB5 764 aa9.05□□□□□ -0.96
MDH1-215ENST00000539945 ACTRT3Q9BYD9 372 aa9.05□□□□□ -0.96
MDH1-215ENST00000539945 FSCN3Q9NQT6 498 aa9.05□□□□□ -0.96
MDH1-215ENST00000539945 THSD1Q9NS62 852 aa9.05□□□□□ -0.96
MDH1-215ENST00000539945 DDX18Q9NVP1 670 aaKnown RBP9.05□□□□□ -0.96
MDH1-215ENST00000539945 IRAK4Q9NWZ3 460 aa9.05□□□□□ -0.96
MDH1-215ENST00000539945 SMPD3Q9NY59 655 aaPredicted RBP9.05□□□□□ -0.96
MDH1-215ENST00000539945 USE1Q9NZ43 259 aa9.05□□□□□ -0.96
MDH1-215ENST00000539945 TMEM9Q9P0T7 183 aa9.05□□□□□ -0.96
MDH1-215ENST00000539945 RAB23Q9ULC3 237 aa9.05□□□□□ -0.96
MDH1-215ENST00000539945 C19orf53Q9UNZ5 99 aaPredicted RBP9.05□□□□□ -0.96
MDH1-215ENST00000539945 LIPT1Q9Y234 373 aa9.05□□□□□ -0.96
MDH1-215ENST00000539945 MRPS33Q9Y291 106 aaKnown RBP9.05□□□□□ -0.96
MDH1-215ENST00000539945 A0A0G2JPF8 293 aa9.04□□□□□ -0.96
MDH1-215ENST00000539945 EME2A4GXA9 379 aaPredicted RBP9.04□□□□□ -0.96
MDH1-215ENST00000539945 MAGEA13PA6NCF6 341 aa9.04□□□□□ -0.96
MDH1-215ENST00000539945 DUXAA6NLW8 204 aa9.04□□□□□ -0.96
MDH1-215ENST00000539945 HNRNPCL2B2RXH8 293 aa9.04□□□□□ -0.96
MDH1-215ENST00000539945 HNRNPCL3B7ZW38 293 aa9.04□□□□□ -0.96
MDH1-215ENST00000539945 SLC28A2O43868 658 aa9.04□□□□□ -0.96
MDH1-215ENST00000539945 PCDHGA12O60330 932 aa9.04□□□□□ -0.96
MDH1-215ENST00000539945 PLOD3O60568 738 aa9.04□□□□□ -0.96
MDH1-215ENST00000539945 CTNSO60931 367 aa9.04□□□□□ -0.96
MDH1-215ENST00000539945 SERPINB7O75635 380 aa9.04□□□□□ -0.96
MDH1-215ENST00000539945 OR2B3O76000 313 aa9.04□□□□□ -0.96
MDH1-215ENST00000539945 CER1O95813 267 aa9.04□□□□□ -0.96
MDH1-215ENST00000539945 AGR2O95994 175 aa9.04□□□□□ -0.96
MDH1-215ENST00000539945 SP9P0CG40 484 aa9.04□□□□□ -0.96
MDH1-215ENST00000539945 HNRNPCL4P0DMR1 293 aa9.04□□□□□ -0.96
MDH1-215ENST00000539945 NR2F1P10589 423 aa9.04□□□□□ -0.96
MDH1-215ENST00000539945 ETS2P15036 469 aa9.04□□□□□ -0.96
MDH1-215ENST00000539945 ITGA2P17301 1181 aa9.04□□□□□ -0.96
MDH1-215ENST00000539945 CD247P20963 164 aa9.04□□□□□ -0.96
MDH1-215ENST00000539945 DNAJA1P31689 397 aaKnown RBP9.04□□□□□ -0.96
MDH1-215ENST00000539945 SEPHS1P49903 392 aa9.04□□□□□ -0.96
MDH1-215ENST00000539945 MAPK10P53779 464 aa9.04□□□□□ -0.96
MDH1-215ENST00000539945 IST1P53990 364 aa9.04□□□□□ -0.96
MDH1-215ENST00000539945 CRISP3P54108 245 aa9.04□□□□□ -0.96
MDH1-215ENST00000539945 MRPS35P82673 323 aaKnown RBP9.04□□□□□ -0.96
MDH1-215ENST00000539945 PPP2R2BQ00005 443 aa9.04□□□□□ -0.96
MDH1-215ENST00000539945 ID2Q02363 134 aa9.04□□□□□ -0.96
MDH1-215ENST00000539945 MGAT2Q10469 447 aa9.04□□□□□ -0.96
MDH1-215ENST00000539945 DAG1Q14118 895 aa9.04□□□□□ -0.96
MDH1-215ENST00000539945 KCNAB1Q14722 419 aa9.04□□□□□ -0.96
MDH1-215ENST00000539945 SYPL1Q16563 259 aa9.04□□□□□ -0.96
MDH1-215ENST00000539945 PRICKLE4Q2TBC4 344 aa9.04□□□□□ -0.96
MDH1-215ENST00000539945 RPS26P11Q5JNZ5 115 aaPredicted RBP9.04□□□□□ -0.96
MDH1-215ENST00000539945 EXOSC6Q5RKV6 272 aaKnown RBP9.04□□□□□ -0.96
MDH1-215ENST00000539945 OTUD3Q5T2D3 398 aaPredicted RBP9.04□□□□□ -0.96
MDH1-215ENST00000539945 MFSD12Q6NUT3 480 aa9.04□□□□□ -0.96
MDH1-215ENST00000539945 GUSBP11Q6P575 273 aa9.04□□□□□ -0.96
MDH1-215ENST00000539945 TMEM71Q6P5X7 295 aa9.04□□□□□ -0.96
MDH1-215ENST00000539945 UGT2A3Q6UWM9 527 aa9.04□□□□□ -0.96
MDH1-215ENST00000539945 MED25Q71SY5 747 aa9.04□□□□□ -0.96
MDH1-215ENST00000539945 BMP8AQ7Z5Y6 402 aa9.04□□□□□ -0.96
MDH1-215ENST00000539945 TSEN54Q7Z6J9 526 aaKnown RBP9.04□□□□□ -0.96
MDH1-215ENST00000539945 TMEM179BQ7Z7N9 219 aa9.04□□□□□ -0.96
MDH1-215ENST00000539945 KRT73Q86Y46 540 aa9.04□□□□□ -0.96
MDH1-215ENST00000539945 SLC44A2Q8IWA5 706 aaPredicted RBP9.04□□□□□ -0.96
MDH1-215ENST00000539945 CHERPQ8IWX8 916 aaKnown RBP9.04□□□□□ -0.96
MDH1-215ENST00000539945 SHISA5Q8N114 240 aa9.04□□□□□ -0.96
MDH1-215ENST00000539945 BBS10Q8TAM1 723 aa9.04□□□□□ -0.96
MDH1-215ENST00000539945 SPPL2AQ8TCT8 520 aa9.04□□□□□ -0.96
MDH1-215ENST00000539945 MAGEE2Q8TD90 523 aaPredicted RBP9.04□□□□□ -0.96
MDH1-215ENST00000539945 RASSF5Q8WWW0 418 aa9.04□□□□□ -0.96
MDH1-215ENST00000539945 GEMIN6Q8WXD5 167 aaKnown RBP9.04□□□□□ -0.96
MDH1-215ENST00000539945 NAT6Q93015 286 aa9.04□□□□□ -0.96
MDH1-215ENST00000539945 CTHRC1Q96CG8 243 aa9.04□□□□□ -0.96
MDH1-215ENST00000539945 MVB12AQ96EY5 273 aa9.04□□□□□ -0.96
MDH1-215ENST00000539945 MMABQ96EY8 250 aaPredicted RBP9.04□□□□□ -0.96
MDH1-215ENST00000539945 RDH12Q96NR8 316 aa9.04□□□□□ -0.96
MDH1-215ENST00000539945 TRNT1Q96Q11 434 aaKnown RBP9.04□□□□□ -0.96
MDH1-215ENST00000539945 OR7D2Q96RA2 312 aa9.04□□□□□ -0.96
MDH1-215ENST00000539945 NUDT22Q9BRQ3 303 aa9.04□□□□□ -0.96
MDH1-215ENST00000539945 ANKRD60Q9BZ19 345 aa9.04□□□□□ -0.96
MDH1-215ENST00000539945 ZNF768Q9H5H4 540 aaKnown RBP9.04□□□□□ -0.96
MDH1-215ENST00000539945 CUTCQ9NTM9 273 aa9.04□□□□□ -0.96
MDH1-215ENST00000539945 GIN1Q9NXP7 522 aa9.04□□□□□ -0.96
MDH1-215ENST00000539945 NDUFAF4Q9P032 175 aa9.04□□□□□ -0.96
MDH1-215ENST00000539945 IFT80Q9P2H3 777 aaPredicted RBP9.04□□□□□ -0.96
MDH1-215ENST00000539945 PDP2Q9P2J9 529 aa9.04□□□□□ -0.96
MDH1-215ENST00000539945 PCDHGB3Q9Y5G1 929 aa9.04□□□□□ -0.96
MDH1-215ENST00000539945 GPC6Q9Y625 555 aaPredicted RBP9.04□□□□□ -0.96
MDH1-215ENST00000539945 ASXL3Q9C0F0 2248 aa9.03□□□□□ -0.96
MDH1-215ENST00000539945 CPED1A4D0V7 1026 aa9.03□□□□□ -0.96
MDH1-215ENST00000539945 PATE3B3GLJ2 98 aa9.03□□□□□ -0.96
MDH1-215ENST00000539945 TMEM150CB9EJG8 249 aa9.03□□□□□ -0.96
MDH1-215ENST00000539945 CLDN4O14493 209 aa9.03□□□□□ -0.96
MDH1-215ENST00000539945 E2F6O75461 281 aa9.03□□□□□ -0.96
MDH1-215ENST00000539945 CPNE6O95741 557 aa9.03□□□□□ -0.96
MDH1-215ENST00000539945 SYPP08247 313 aa9.03□□□□□ -0.96
MDH1-215ENST00000539945 ANKRD34CP0C6C1 535 aa9.03□□□□□ -0.96
MDH1-215ENST00000539945 FOLR1P15328 257 aa9.03□□□□□ -0.96
MDH1-215ENST00000539945 FPR1P21462 350 aa9.03□□□□□ -0.96
MDH1-215ENST00000539945 KCNJ5P48544 419 aa9.03□□□□□ -0.96
MDH1-215ENST00000539945 ARHGDIAP52565 204 aa9.03□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 34.2 ms