RNA–Protein interactions for RNA: ENST00000539847.1

CCDC60-204, Transcript of coiled-coil domain containing 60, humanhuman

APPRIS ALT2 TSL 3 BASIC

Gene CCDC60, Length 581 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC60-204ENST00000539847 WDR89Q96FK6 387 aaPredicted RBP7.25□□□□□ -1.25
CCDC60-204ENST00000539847 TMEM80Q96HE8 168 aa7.25□□□□□ -1.25
CCDC60-204ENST00000539847 RADILQ96JH8 1075 aa7.25□□□□□ -1.25
CCDC60-204ENST00000539847 OPALINQ96PE5 141 aa7.25□□□□□ -1.25
CCDC60-204ENST00000539847 NEDD4LQ96PU5 975 aa7.25□□□□□ -1.25
CCDC60-204ENST00000539847 ZNF587Q96SQ5 575 aaPredicted RBP7.25□□□□□ -1.25
CCDC60-204ENST00000539847 GABRG3Q99928 467 aa7.25□□□□□ -1.25
CCDC60-204ENST00000539847 SPOCK3Q9BQ16 436 aa7.25□□□□□ -1.25
CCDC60-204ENST00000539847 RHNO1Q9BSD3 238 aa7.25□□□□□ -1.25
CCDC60-204ENST00000539847 MARVELD1Q9BSK0 173 aa7.25□□□□□ -1.25
CCDC60-204ENST00000539847 CINPQ9BW66 212 aaPredicted RBP7.25□□□□□ -1.25
CCDC60-204ENST00000539847 ACPTQ9BZG2 426 aa7.25□□□□□ -1.25
CCDC60-204ENST00000539847 ROGDIQ9GZN7 287 aa7.25□□□□□ -1.25
CCDC60-204ENST00000539847 TMEM38AQ9H6F2 299 aa7.25□□□□□ -1.25
CCDC60-204ENST00000539847 HHATLQ9HCP6 504 aa7.25□□□□□ -1.25
CCDC60-204ENST00000539847 ZNF275Q9NSD4 429 aaPredicted RBP7.25□□□□□ -1.25
CCDC60-204ENST00000539847 MRPS18AQ9NVS2 196 aaKnown RBP7.25□□□□□ -1.25
CCDC60-204ENST00000539847 RBFOX1Q9NWB1 397 aaKnown RBP7.25□□□□□ -1.25
CCDC60-204ENST00000539847 NDUFB11Q9NX14 153 aa7.25□□□□□ -1.25
CCDC60-204ENST00000539847 ERVK13-1Q9NX77 482 aa7.25□□□□□ -1.25
CCDC60-204ENST00000539847 MS4A12Q9NXJ0 267 aa7.25□□□□□ -1.25
CCDC60-204ENST00000539847 KCTD5Q9NXV2 234 aa7.25□□□□□ -1.25
CCDC60-204ENST00000539847 WWOXQ9NZC7 414 aa7.25□□□□□ -1.25
CCDC60-204ENST00000539847 CFAP97Q9P2B7 532 aa7.25□□□□□ -1.25
CCDC60-204ENST00000539847 DEC1Q9P2X7 70 aa7.25□□□□□ -1.25
CCDC60-204ENST00000539847 RUVBL1Q9Y265 456 aaKnown RBP7.25□□□□□ -1.25
CCDC60-204ENST00000539847 KLHL20Q9Y2M5 609 aa7.25□□□□□ -1.25
CCDC60-204ENST00000539847 RPL36Q9Y3U8 105 aaKnown RBP7.25□□□□□ -1.25
CCDC60-204ENST00000539847 RAI2Q9Y5P3 530 aa7.25□□□□□ -1.25
CCDC60-204ENST00000539847 KNL1Q8NG31 2342 aa7.25□□□□□ -1.25
CCDC60-204ENST00000539847 MYO16Q9Y6X6 1858 aa7.25□□□□□ -1.25
CCDC60-204ENST00000539847 ANAPC1Q9H1A4 1944 aa7.25□□□□□ -1.25
CCDC60-204ENST00000539847 NBEAQ8NFP9 2946 aa7.24□□□□□ -1.25
CCDC60-204ENST00000539847 CABIN1Q9Y6J0 2220 aa7.24□□□□□ -1.25
CCDC60-204ENST00000539847 GCN1Q92616 2671 aaKnown RBP7.24□□□□□ -1.25
CCDC60-204ENST00000539847 IGHV1OR15-9A0A0B4J2B8 117 aa7.24□□□□□ -1.25
CCDC60-204ENST00000539847 A0A0U1RQS6 177 aa7.24□□□□□ -1.25
CCDC60-204ENST00000539847 A0A1W2PQ09 198 aa7.24□□□□□ -1.25
CCDC60-204ENST00000539847 A0A1W2PQF6 199 aa7.24□□□□□ -1.25
CCDC60-204ENST00000539847 FABP12A6NFH5 140 aa7.24□□□□□ -1.25
CCDC60-204ENST00000539847 TUBAL3A6NHL2 446 aa7.24□□□□□ -1.25
CCDC60-204ENST00000539847 hCG_2039718K7EN88 272 aa7.24□□□□□ -1.25
CCDC60-204ENST00000539847 OR1I1O60431 355 aa7.24□□□□□ -1.25
CCDC60-204ENST00000539847 CLDN11O75508 207 aa7.24□□□□□ -1.25
CCDC60-204ENST00000539847 CCNB2O95067 398 aa7.24□□□□□ -1.25
CCDC60-204ENST00000539847 SCGB1D2O95969 90 aa7.24□□□□□ -1.25
CCDC60-204ENST00000539847 PDYNP01213 254 aa7.24□□□□□ -1.25
CCDC60-204ENST00000539847 C8GP07360 202 aa7.24□□□□□ -1.25
CCDC60-204ENST00000539847 CSF3P09919 207 aa7.24□□□□□ -1.25
CCDC60-204ENST00000539847 ZDHHC11BP0C7U3 371 aa7.24□□□□□ -1.25
CCDC60-204ENST00000539847 MPC1LP0DKB6 136 aa7.24□□□□□ -1.25
CCDC60-204ENST00000539847 UBL4AP11441 157 aa7.24□□□□□ -1.25
CCDC60-204ENST00000539847 GABRG2P18507 467 aa7.24□□□□□ -1.25
CCDC60-204ENST00000539847 RHCEP18577 417 aa7.24□□□□□ -1.25
CCDC60-204ENST00000539847 TACR2P21452 398 aa7.24□□□□□ -1.25
CCDC60-204ENST00000539847 GALP22466 123 aa7.24□□□□□ -1.25
CCDC60-204ENST00000539847 FGF9P31371 208 aaPredicted RBP7.24□□□□□ -1.25
CCDC60-204ENST00000539847 ACVRL1P37023 503 aa7.24□□□□□ -1.25
CCDC60-204ENST00000539847 RPL3P39023 403 aaKnown RBP7.24□□□□□ -1.25
CCDC60-204ENST00000539847 ARL1P40616 181 aaPredicted RBP7.24□□□□□ -1.25
CCDC60-204ENST00000539847 HTR2BP41595 481 aa7.24□□□□□ -1.25
CCDC60-204ENST00000539847 SLC6A11P48066 632 aa7.24□□□□□ -1.25
CCDC60-204ENST00000539847 CRISP1P54107 249 aa7.24□□□□□ -1.25
CCDC60-204ENST00000539847 SMIM11AP58511 58 aa7.24□□□□□ -1.25
CCDC60-204ENST00000539847 PPP3R1P63098 170 aa7.24□□□□□ -1.25
CCDC60-204ENST00000539847 SUMO1P63165 101 aaKnown RBP7.24□□□□□ -1.25
CCDC60-204ENST00000539847 PLIN5Q00G26 463 aa7.24□□□□□ -1.25
CCDC60-204ENST00000539847 ALDH6A1Q02252 535 aaKnown RBP7.24□□□□□ -1.25
CCDC60-204ENST00000539847 TAF10Q12962 218 aa7.24□□□□□ -1.25
CCDC60-204ENST00000539847 SP140Q13342 867 aa7.24□□□□□ -1.25
CCDC60-204ENST00000539847 MAB21L1Q13394 359 aa7.24□□□□□ -1.25
CCDC60-204ENST00000539847 RGNQ15493 299 aa7.24□□□□□ -1.25
CCDC60-204ENST00000539847 SPHARQ15513 63 aa7.24□□□□□ -1.25
CCDC60-204ENST00000539847 BAK1Q16611 211 aa7.24□□□□□ -1.25
CCDC60-204ENST00000539847 Q5BKY6 102 aa7.24□□□□□ -1.25
CCDC60-204ENST00000539847 ZNF628Q5EBL2 1059 aa7.24□□□□□ -1.25
CCDC60-204ENST00000539847 FBXO48Q5FWF7 155 aa7.24□□□□□ -1.25
CCDC60-204ENST00000539847 LY6G5CQ5SRR4 150 aa7.24□□□□□ -1.25
CCDC60-204ENST00000539847 PDZK1Q5T2W1 519 aa7.24□□□□□ -1.25
CCDC60-204ENST00000539847 HECTD3Q5T447 861 aa7.24□□□□□ -1.25
CCDC60-204ENST00000539847 DDI2Q5TDH0 399 aa7.24□□□□□ -1.25
CCDC60-204ENST00000539847 HACD4Q5VWC8 232 aa7.24□□□□□ -1.25
CCDC60-204ENST00000539847 BICRALQ6AI39 1079 aa7.24□□□□□ -1.25
CCDC60-204ENST00000539847 NCEH1Q6PIU2 408 aa7.24□□□□□ -1.25
CCDC60-204ENST00000539847 PLET1Q6UQ28 207 aa7.24□□□□□ -1.25
CCDC60-204ENST00000539847 ZNF621Q6ZSS3 439 aa7.24□□□□□ -1.25
CCDC60-204ENST00000539847 TSEN54Q7Z6J9 526 aaKnown RBP7.24□□□□□ -1.25
CCDC60-204ENST00000539847 VTCN1Q7Z7D3 282 aa7.24□□□□□ -1.25
CCDC60-204ENST00000539847 C12orf40Q86WS4 652 aa7.24□□□□□ -1.25
CCDC60-204ENST00000539847 WFDC8Q8IUA0 241 aa7.24□□□□□ -1.25
CCDC60-204ENST00000539847 LINC00471Q8N535 108 aa7.24□□□□□ -1.25
CCDC60-204ENST00000539847 ZBTB2Q8N680 514 aa7.24□□□□□ -1.25
CCDC60-204ENST00000539847 LSMEM1Q8N8F7 131 aa7.24□□□□□ -1.25
CCDC60-204ENST00000539847 GALNT11Q8NCW6 608 aa7.24□□□□□ -1.25
CCDC60-204ENST00000539847 CADM4Q8NFZ8 388 aa7.24□□□□□ -1.25
CCDC60-204ENST00000539847 OR4A15Q8NGL6 344 aa7.24□□□□□ -1.25
CCDC60-204ENST00000539847 GPR151Q8TDV0 419 aa7.24□□□□□ -1.25
CCDC60-204ENST00000539847 SELENOMQ8WWX9 145 aa7.24□□□□□ -1.25
CCDC60-204ENST00000539847 DNASE2BQ8WZ79 361 aa7.24□□□□□ -1.25
CCDC60-204ENST00000539847 RPRD1AQ96P16 312 aaPredicted RBP7.24□□□□□ -1.25
Retrieved 100 of 20,778 RNA–protein pairs in 25.5 ms