RNA–Protein interactions for RNA: ENST00000538862.6

CDCA3-207, Transcript of cell division cycle associated 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDCA3, Length 1,943 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDCA3-207ENST00000538862 SLC35G5Q96KT7 338 aa13.71□□□□□ -0.21
CDCA3-207ENST00000538862 SDHCQ99643 169 aaPredicted RBP13.71□□□□□ -0.21
CDCA3-207ENST00000538862 SPATA5L1Q9BVQ7 753 aa13.71□□□□□ -0.21
CDCA3-207ENST00000538862 TSSK6Q9BXA6 273 aa13.71□□□□□ -0.21
CDCA3-207ENST00000538862 POLDIP3Q9BY77 421 aaKnown RBP13.71□□□□□ -0.21
CDCA3-207ENST00000538862 TMEM245Q9H330 911 aa13.71□□□□□ -0.21
CDCA3-207ENST00000538862 SERHL2Q9H4I8 314 aa13.71□□□□□ -0.21
CDCA3-207ENST00000538862 TEX10Q9NXF1 929 aaPredicted RBP13.71□□□□□ -0.21
CDCA3-207ENST00000538862 CLEC2DQ9UHP7 191 aa13.71□□□□□ -0.21
CDCA3-207ENST00000538862 STUB1Q9UNE7 303 aa13.71□□□□□ -0.21
CDCA3-207ENST00000538862 SNX11Q9Y5W9 270 aa13.71□□□□□ -0.21
CDCA3-207ENST00000538862 FRYLO94915 3013 aa13.71□□□□□ -0.22
CDCA3-207ENST00000538862 RIF1Q5UIP0 2472 aaKnown RBP13.71□□□□□ -0.22
CDCA3-207ENST00000538862 A0A0A6YYD5 115 aa13.7□□□□□ -0.22
CDCA3-207ENST00000538862 FEZF1A0PJY2 475 aa13.7□□□□□ -0.22
CDCA3-207ENST00000538862 PRAMEF27A3QJZ7 478 aa13.7□□□□□ -0.22
CDCA3-207ENST00000538862 C1QTNF3-AMACRE9PGA6 284 aa13.7□□□□□ -0.22
CDCA3-207ENST00000538862 NME6O75414 186 aaPredicted RBP13.7□□□□□ -0.22
CDCA3-207ENST00000538862 CLEC3AO75596 197 aa13.7□□□□□ -0.22
CDCA3-207ENST00000538862 IGFBP1P08833 259 aaPredicted RBP13.7□□□□□ -0.22
CDCA3-207ENST00000538862 SP9P0CG40 484 aa13.7□□□□□ -0.22
CDCA3-207ENST00000538862 SPNP16150 400 aa13.7□□□□□ -0.22
CDCA3-207ENST00000538862 PPP2R1BP30154 601 aa13.7□□□□□ -0.22
CDCA3-207ENST00000538862 TNFSF8P32971 234 aa13.7□□□□□ -0.22
CDCA3-207ENST00000538862 P2RY2P41231 377 aa13.7□□□□□ -0.22
CDCA3-207ENST00000538862 CRYBB2P43320 205 aa13.7□□□□□ -0.22
CDCA3-207ENST00000538862 CSTF1Q05048 431 aaKnown RBP13.7□□□□□ -0.22
CDCA3-207ENST00000538862 ZNF91Q05481 1191 aa13.7□□□□□ -0.22
CDCA3-207ENST00000538862 C1DQ13901 141 aaKnown RBP13.7□□□□□ -0.22
CDCA3-207ENST00000538862 KCNJ8Q15842 424 aa13.7□□□□□ -0.22
CDCA3-207ENST00000538862 FAM46CQ5VWP2 391 aa13.7□□□□□ -0.22
CDCA3-207ENST00000538862 SLC6A18Q96N87 628 aa13.7□□□□□ -0.22
CDCA3-207ENST00000538862 CNPPD1Q9BV87 410 aa13.7□□□□□ -0.22
CDCA3-207ENST00000538862 OR51I1Q9H343 314 aa13.7□□□□□ -0.22
CDCA3-207ENST00000538862 SMURF1Q9HCE7 757 aa13.7□□□□□ -0.22
CDCA3-207ENST00000538862 BCL2L10Q9HD36 194 aa13.7□□□□□ -0.22
CDCA3-207ENST00000538862 EXOSC4Q9NPD3 245 aaKnown RBP13.7□□□□□ -0.22
CDCA3-207ENST00000538862 NDUFB11Q9NX14 153 aa13.7□□□□□ -0.22
CDCA3-207ENST00000538862 HCN2Q9UL51 889 aa13.7□□□□□ -0.22
CDCA3-207ENST00000538862 SLC9A8Q9Y2E8 581 aa13.7□□□□□ -0.22
CDCA3-207ENST00000538862 R4GN57 208 aa13.7□□□□□ -0.22
CDCA3-207ENST00000538862 FANCMQ8IYD8 2048 aa13.7□□□□□ -0.22
CDCA3-207ENST00000538862 HTR3EA5X5Y0 456 aa13.7□□□□□ -0.22
CDCA3-207ENST00000538862 ZNF670-ZNF695F2Z2N8 137 aa13.7□□□□□ -0.22
CDCA3-207ENST00000538862 ASNA1O43681 348 aa13.7□□□□□ -0.22
CDCA3-207ENST00000538862 OR1F1O43749 312 aa13.7□□□□□ -0.22
CDCA3-207ENST00000538862 NR2F1P10589 423 aa13.7□□□□□ -0.22
CDCA3-207ENST00000538862 CKMT1AP12532 417 aa13.7□□□□□ -0.22
CDCA3-207ENST00000538862 RPS19P39019 145 aaKnown RBP13.7□□□□□ -0.22
CDCA3-207ENST00000538862 ANXA11P50995 505 aaKnown RBP13.7□□□□□ -0.22
CDCA3-207ENST00000538862 RORCP51449 518 aa13.7□□□□□ -0.22
CDCA3-207ENST00000538862 CSNK1G2P78368 415 aa13.7□□□□□ -0.22
CDCA3-207ENST00000538862 CDK3Q00526 305 aa13.7□□□□□ -0.22
CDCA3-207ENST00000538862 PIN1Q13526 163 aaPredicted RBP13.7□□□□□ -0.22
CDCA3-207ENST00000538862 GNA13Q14344 377 aa13.7□□□□□ -0.22
CDCA3-207ENST00000538862 LRRC32Q14392 662 aa13.7□□□□□ -0.22
CDCA3-207ENST00000538862 SYPL1Q16563 259 aa13.7□□□□□ -0.22
CDCA3-207ENST00000538862 KIAA1161Q6NSJ0 714 aa13.7□□□□□ -0.22
CDCA3-207ENST00000538862 PODNL1Q6PEZ8 512 aa13.7□□□□□ -0.22
CDCA3-207ENST00000538862 MMAAQ8IVH4 418 aaKnown RBP13.7□□□□□ -0.22
CDCA3-207ENST00000538862 SFTPA1Q8IWL2 248 aa13.7□□□□□ -0.22
CDCA3-207ENST00000538862 RAB42Q8N4Z0 105 aa13.7□□□□□ -0.22
CDCA3-207ENST00000538862 TTLQ8NG68 377 aa13.7□□□□□ -0.22
CDCA3-207ENST00000538862 OR9Q1Q8NGQ5 310 aa13.7□□□□□ -0.22
CDCA3-207ENST00000538862 BBS10Q8TAM1 723 aa13.7□□□□□ -0.22
CDCA3-207ENST00000538862 SETD6Q8TBK2 473 aa13.7□□□□□ -0.22
CDCA3-207ENST00000538862 XAGE5Q8WWM1 108 aa13.7□□□□□ -0.22
CDCA3-207ENST00000538862 AMDHD1Q96NU7 426 aa13.7□□□□□ -0.22
CDCA3-207ENST00000538862 KCNS3Q9BQ31 491 aa13.7□□□□□ -0.22
CDCA3-207ENST00000538862 WFDC6Q9BQY6 131 aa13.7□□□□□ -0.22
CDCA3-207ENST00000538862 FNDC11Q9BVV2 318 aa13.7□□□□□ -0.22
CDCA3-207ENST00000538862 POLR2J2Q9GZM3 115 aaKnown RBP13.7□□□□□ -0.22
CDCA3-207ENST00000538862 GLIPR2Q9H4G4 154 aa13.7□□□□□ -0.22
CDCA3-207ENST00000538862 MVB12BQ9H7P6 319 aa13.7□□□□□ -0.22
CDCA3-207ENST00000538862 DIMT1Q9UNQ2 313 aaKnown RBP13.7□□□□□ -0.22
CDCA3-207ENST00000538862 KLHL20Q9Y2M5 609 aa13.7□□□□□ -0.22
CDCA3-207ENST00000538862 ZBTB32Q9Y2Y4 487 aaPredicted RBP13.7□□□□□ -0.22
CDCA3-207ENST00000538862 HEATR5BQ9P2D3 2071 aa13.69□□□□□ -0.22
CDCA3-207ENST00000538862 HYKKA2RU49 373 aa13.69□□□□□ -0.22
CDCA3-207ENST00000538862 SLC35F4A4IF30 521 aa13.69□□□□□ -0.22
CDCA3-207ENST00000538862 GPR89AB7ZAQ6 455 aa13.69□□□□□ -0.22
CDCA3-207ENST00000538862 DYRK3O43781 588 aa13.69□□□□□ -0.22
CDCA3-207ENST00000538862 GPR89BP0CG08 455 aa13.69□□□□□ -0.22
CDCA3-207ENST00000538862 TNNI3P19429 210 aa13.69□□□□□ -0.22
CDCA3-207ENST00000538862 PSMB5P28074 263 aa13.69□□□□□ -0.22
CDCA3-207ENST00000538862 SOX3P41225 446 aa13.69□□□□□ -0.22
CDCA3-207ENST00000538862 PCYT1AP49585 367 aa13.69□□□□□ -0.22
CDCA3-207ENST00000538862 COPZ1P61923 177 aa13.69□□□□□ -0.22
CDCA3-207ENST00000538862 TMEM35AQ53FP2 167 aa13.69□□□□□ -0.22
CDCA3-207ENST00000538862 ENTPD8Q5MY95 495 aa13.69□□□□□ -0.22
CDCA3-207ENST00000538862 THOC7Q6I9Y2 204 aaKnown RBP13.69□□□□□ -0.22
CDCA3-207ENST00000538862 CREB3L4Q8TEY5 395 aa13.69□□□□□ -0.22
CDCA3-207ENST00000538862 TMCO6Q96DC7 493 aa13.69□□□□□ -0.22
CDCA3-207ENST00000538862 NRTNQ99748 197 aa13.69□□□□□ -0.22
CDCA3-207ENST00000538862 DPH7Q9BTV6 452 aa13.69□□□□□ -0.22
CDCA3-207ENST00000538862 FAIM2Q9BWQ8 316 aa13.69□□□□□ -0.22
CDCA3-207ENST00000538862 SLC35C2Q9NQQ7 365 aa13.69□□□□□ -0.22
CDCA3-207ENST00000538862 ACSL5Q9ULC5 683 aa13.69□□□□□ -0.22
CDCA3-207ENST00000538862 SSR3Q9UNL2 185 aa13.69□□□□□ -0.22
CDCA3-207ENST00000538862 CAB39Q9Y376 341 aaPredicted RBP13.69□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 41.1 ms