RNA–Protein interactions for RNA: ENST00000538828.1

CLTCL1-205, Transcript of clathrin heavy chain like 1, human

TSL 5

Gene CLTCL1, Length 448 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CLTCL1-205	ENST00000538828	BTK	Q06187	659 aa		11.32	□□□□□ -0.6
CLTCL1-205	ENST00000538828	XKR7	Q5GH72	579 aa		11.32	□□□□□ -0.6
CLTCL1-205	ENST00000538828	CLEC6A	Q6EIG7	209 aa		11.32	□□□□□ -0.6
CLTCL1-205	ENST00000538828	FAM111B	Q6SJ93	734 aa		11.32	□□□□□ -0.6
CLTCL1-205	ENST00000538828	SCIMP	Q6UWF3	145 aa		11.32	□□□□□ -0.6
CLTCL1-205	ENST00000538828	FJX1	Q86VR8	437 aa		11.32	□□□□□ -0.6
CLTCL1-205	ENST00000538828	CCDC116	Q8IYX3	515 aa		11.32	□□□□□ -0.6
CLTCL1-205	ENST00000538828	LRRC34	Q8IZ02	419 aa		11.32	□□□□□ -0.6
CLTCL1-205	ENST00000538828	MMP21	Q8N119	569 aa		11.32	□□□□□ -0.6
CLTCL1-205	ENST00000538828	FAM57A	Q8TBR7	257 aa		11.32	□□□□□ -0.6
CLTCL1-205	ENST00000538828	SPPL2A	Q8TCT8	520 aa		11.32	□□□□□ -0.6
CLTCL1-205	ENST00000538828	TWIST2	Q8WVJ9	160 aa		11.32	□□□□□ -0.6
CLTCL1-205	ENST00000538828	BBS4	Q96RK4	519 aa		11.32	□□□□□ -0.6
CLTCL1-205	ENST00000538828	ANGPTL4	Q9BY76	406 aa		11.32	□□□□□ -0.6
CLTCL1-205	ENST00000538828	NXF5	Q9H1B4	397 aa	Known RBP	11.32	□□□□□ -0.6
CLTCL1-205	ENST00000538828	TUBB1	Q9H4B7	451 aa		11.32	□□□□□ -0.6
CLTCL1-205	ENST00000538828	PROK2	Q9HC23	129 aa		11.32	□□□□□ -0.6
CLTCL1-205	ENST00000538828	HAO1	Q9UJM8	370 aa		11.32	□□□□□ -0.6
CLTCL1-205	ENST00000538828	SEC23IP	Q9Y6Y8	1000 aa	Known RBP	11.32	□□□□□ -0.6
CLTCL1-205	ENST00000538828	UTP20	O75691	2785 aa	Known RBP	11.32	□□□□□ -0.6
CLTCL1-205	ENST00000538828	CENPE	Q02224	2701 aa		11.31	□□□□□ -0.6
CLTCL1-205	ENST00000538828	OR6C70	A6NIJ9	312 aa		11.31	□□□□□ -0.6
CLTCL1-205	ENST00000538828	TMEM114	B3SHH9	223 aa		11.31	□□□□□ -0.6
CLTCL1-205	ENST00000538828	AQP7	O14520	342 aa		11.31	□□□□□ -0.6
CLTCL1-205	ENST00000538828	BCKDK	O14874	412 aa		11.31	□□□□□ -0.6
CLTCL1-205	ENST00000538828	TRIM3	O75382	744 aa	Predicted RBP	11.31	□□□□□ -0.6
CLTCL1-205	ENST00000538828	WISP2	O76076	250 aa		11.31	□□□□□ -0.6
CLTCL1-205	ENST00000538828	PSMG1	O95456	288 aa		11.31	□□□□□ -0.6
CLTCL1-205	ENST00000538828	SERPINE1	P05121	402 aa		11.31	□□□□□ -0.6
CLTCL1-205	ENST00000538828	CHRNG	P07510	517 aa		11.31	□□□□□ -0.6
CLTCL1-205	ENST00000538828	ABCB1	P08183	1280 aa	Predicted RBP	11.31	□□□□□ -0.6
CLTCL1-205	ENST00000538828	ELAVL4	P26378	380 aa	Known RBP	11.31	□□□□□ -0.6
CLTCL1-205	ENST00000538828	NTS	P30990	170 aa		11.31	□□□□□ -0.6
CLTCL1-205	ENST00000538828	FRK	P42685	505 aa	Predicted RBP	11.31	□□□□□ -0.6
CLTCL1-205	ENST00000538828	SERPINB4	P48594	390 aa		11.31	□□□□□ -0.6
CLTCL1-205	ENST00000538828	SMS	P52788	366 aa		11.31	□□□□□ -0.6
CLTCL1-205	ENST00000538828	MRPS22	P82650	360 aa	Known RBP	11.31	□□□□□ -0.6
CLTCL1-205	ENST00000538828	DUSP2	Q05923	314 aa		11.31	□□□□□ -0.6
CLTCL1-205	ENST00000538828	PDE7A	Q13946	482 aa		11.31	□□□□□ -0.6
CLTCL1-205	ENST00000538828	SLC10A1	Q14973	349 aa		11.31	□□□□□ -0.6
CLTCL1-205	ENST00000538828	C3AR1	Q16581	482 aa		11.31	□□□□□ -0.6
CLTCL1-205	ENST00000538828	TRMT12	Q53H54	448 aa	Known RBP	11.31	□□□□□ -0.6
CLTCL1-205	ENST00000538828	C1QL3	Q5VWW1	255 aa		11.31	□□□□□ -0.6
CLTCL1-205	ENST00000538828	TMEM198	Q66K66	360 aa		11.31	□□□□□ -0.6
CLTCL1-205	ENST00000538828	TMEM211	Q6ICI0	200 aa		11.31	□□□□□ -0.6
CLTCL1-205	ENST00000538828	SLC30A6	Q6NXT4	461 aa		11.31	□□□□□ -0.6
CLTCL1-205	ENST00000538828	TRIL	Q7L0X0	811 aa		11.31	□□□□□ -0.6
CLTCL1-205	ENST00000538828	R3HCC1L	Q7Z5L2	792 aa	Known RBP	11.31	□□□□□ -0.6
CLTCL1-205	ENST00000538828	TICAM1	Q8IUC6	712 aa		11.31	□□□□□ -0.6
CLTCL1-205	ENST00000538828	NUDCD3	Q8IVD9	361 aa		11.31	□□□□□ -0.6
CLTCL1-205	ENST00000538828	TMEM251	Q8N6I4	163 aa		11.31	□□□□□ -0.6
CLTCL1-205	ENST00000538828	OR10G3	Q8NGC4	313 aa		11.31	□□□□□ -0.6
CLTCL1-205	ENST00000538828	OR52R1	Q8NGF1	315 aa		11.31	□□□□□ -0.6
CLTCL1-205	ENST00000538828	OR52N2	Q8NGI0	321 aa		11.31	□□□□□ -0.6
CLTCL1-205	ENST00000538828	EXOSC8	Q96B26	276 aa	Known RBP	11.31	□□□□□ -0.6
CLTCL1-205	ENST00000538828	SLC35A4	Q96G79	324 aa		11.31	□□□□□ -0.6
CLTCL1-205	ENST00000538828	CCDC120	Q96HB5	630 aa		11.31	□□□□□ -0.6
CLTCL1-205	ENST00000538828	TMEM41A	Q96HV5	264 aa		11.31	□□□□□ -0.6
CLTCL1-205	ENST00000538828	VSTM2L	Q96N03	204 aa		11.31	□□□□□ -0.6
CLTCL1-205	ENST00000538828	DMRTA2	Q96SC8	542 aa		11.31	□□□□□ -0.6
CLTCL1-205	ENST00000538828	MECR	Q9BV79	373 aa		11.31	□□□□□ -0.6
CLTCL1-205	ENST00000538828	TP63	Q9H3D4	680 aa	Predicted RBP	11.31	□□□□□ -0.6
CLTCL1-205	ENST00000538828	ACSS1	Q9NUB1	689 aa	Predicted RBP	11.31	□□□□□ -0.6
CLTCL1-205	ENST00000538828	TUBA8	Q9NY65	449 aa	Predicted RBP	11.31	□□□□□ -0.6
CLTCL1-205	ENST00000538828	NTM	Q9P121	344 aa		11.31	□□□□□ -0.6
CLTCL1-205	ENST00000538828	B4GALT7	Q9UBV7	327 aa		11.31	□□□□□ -0.6
CLTCL1-205	ENST00000538828	BCAP29	Q9UHQ4	241 aa		11.31	□□□□□ -0.6
CLTCL1-205	ENST00000538828	C19orf53	Q9UNZ5	99 aa	Predicted RBP	11.31	□□□□□ -0.6
CLTCL1-205	ENST00000538828	MAPRE3	Q9UPY8	281 aa		11.31	□□□□□ -0.6
CLTCL1-205	ENST00000538828	EXO1	Q9UQ84	846 aa	Known RBP	11.31	□□□□□ -0.6
CLTCL1-205	ENST00000538828	MEMO1	Q9Y316	297 aa		11.31	□□□□□ -0.6
CLTCL1-205	ENST00000538828	POLR3H	Q9Y535	204 aa	Predicted RBP	11.31	□□□□□ -0.6
CLTCL1-205	ENST00000538828	NOTCH2	Q04721	2471 aa		11.31	□□□□□ -0.6
CLTCL1-205	ENST00000538828	PHF3	Q92576	2039 aa	Known RBP	11.3	□□□□□ -0.6
CLTCL1-205	ENST00000538828		A0A1B0GTH9	108 aa		11.3	□□□□□ -0.6
CLTCL1-205	ENST00000538828	PINLYP	A6NC86	204 aa		11.3	□□□□□ -0.6
CLTCL1-205	ENST00000538828	ZG16	O60844	167 aa		11.3	□□□□□ -0.6
CLTCL1-205	ENST00000538828	LYPLA1	O75608	230 aa	Predicted RBP	11.3	□□□□□ -0.6
CLTCL1-205	ENST00000538828	SOX30	O94993	753 aa		11.3	□□□□□ -0.6
CLTCL1-205	ENST00000538828	ESRRA	P11474	423 aa	Predicted RBP	11.3	□□□□□ -0.6
CLTCL1-205	ENST00000538828	PRPS2	P11908	318 aa		11.3	□□□□□ -0.6
CLTCL1-205	ENST00000538828	CREB1	P16220	341 aa		11.3	□□□□□ -0.6
CLTCL1-205	ENST00000538828	PTGER1	P34995	402 aa		11.3	□□□□□ -0.6
CLTCL1-205	ENST00000538828	CASP3	P42574	277 aa		11.3	□□□□□ -0.6
CLTCL1-205	ENST00000538828	PNLIPRP2	P54317	469 aa		11.3	□□□□□ -0.6
CLTCL1-205	ENST00000538828	C21orf58	P58505	322 aa		11.3	□□□□□ -0.6
CLTCL1-205	ENST00000538828	KCNJ2	P63252	427 aa		11.3	□□□□□ -0.6
CLTCL1-205	ENST00000538828	DUSP8	Q13202	625 aa		11.3	□□□□□ -0.6
CLTCL1-205	ENST00000538828	MAD2L1	Q13257	205 aa	Predicted RBP	11.3	□□□□□ -0.6
CLTCL1-205	ENST00000538828	EFR3A	Q14156	821 aa		11.3	□□□□□ -0.6
CLTCL1-205	ENST00000538828	MLC1	Q15049	377 aa		11.3	□□□□□ -0.6
CLTCL1-205	ENST00000538828	CYP27C1	Q4G0S4	372 aa		11.3	□□□□□ -0.6
CLTCL1-205	ENST00000538828	RFTN2	Q52LD8	501 aa	Predicted RBP	11.3	□□□□□ -0.6
CLTCL1-205	ENST00000538828	SH2D4B	Q5SQS7	431 aa		11.3	□□□□□ -0.6
CLTCL1-205	ENST00000538828	CEP85L	Q5SZL2	805 aa		11.3	□□□□□ -0.6
CLTCL1-205	ENST00000538828	FGD2	Q7Z6J4	655 aa		11.3	□□□□□ -0.6
CLTCL1-205	ENST00000538828	PACS2	Q86VP3	889 aa		11.3	□□□□□ -0.6
CLTCL1-205	ENST00000538828	DOLPP1	Q86YN1	238 aa		11.3	□□□□□ -0.6
CLTCL1-205	ENST00000538828	OR2L13	Q8N349	312 aa		11.3	□□□□□ -0.6
CLTCL1-205	ENST00000538828	FAM13C	Q8NE31	585 aa		11.3	□□□□□ -0.6

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