RNA–Protein interactions for RNA: ENST00000538596.6

CPNE8-203, Transcript of copine 8, humanhuman

TSL 1 (best) BASIC

Gene CPNE8, Length 2,875 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE8-203ENST00000538596 DAB2P98082 770 aa11.27□□□□□ -0.61
CPNE8-203ENST00000538596 RPA4Q13156 261 aa11.27□□□□□ -0.61
CPNE8-203ENST00000538596 LARS2Q15031 903 aaKnown RBP11.27□□□□□ -0.61
CPNE8-203ENST00000538596 BCL2A1Q16548 175 aa11.27□□□□□ -0.61
CPNE8-203ENST00000538596 OCLNQ16625 522 aa11.27□□□□□ -0.61
CPNE8-203ENST00000538596 GPAT3Q53EU6 434 aa11.27□□□□□ -0.61
CPNE8-203ENST00000538596 FAM78AQ5JUQ0 283 aa11.27□□□□□ -0.61
CPNE8-203ENST00000538596 PIP5KL1Q5T9C9 394 aa11.27□□□□□ -0.61
CPNE8-203ENST00000538596 AGAP6Q5VW22 663 aa11.27□□□□□ -0.61
CPNE8-203ENST00000538596 DGLUCYQ7Z3D6 616 aa11.27□□□□□ -0.61
CPNE8-203ENST00000538596 GATAD2AQ86YP4 633 aa11.27□□□□□ -0.61
CPNE8-203ENST00000538596 CNRIP1Q96F85 164 aaPredicted RBP11.27□□□□□ -0.61
CPNE8-203ENST00000538596 AGAP4Q96P64 663 aa11.27□□□□□ -0.61
CPNE8-203ENST00000538596 QRFPRQ96P65 431 aa11.27□□□□□ -0.61
CPNE8-203ENST00000538596 BBS4Q96RK4 519 aa11.27□□□□□ -0.61
CPNE8-203ENST00000538596 NEK6Q9HC98 313 aa11.27□□□□□ -0.61
CPNE8-203ENST00000538596 ACSS1Q9NUB1 689 aaPredicted RBP11.27□□□□□ -0.61
CPNE8-203ENST00000538596 TESQ9UGI8 421 aaKnown RBP11.27□□□□□ -0.61
CPNE8-203ENST00000538596 SERGEFQ9UGK8 458 aa11.27□□□□□ -0.61
CPNE8-203ENST00000538596 SSR3Q9UNL2 185 aa11.27□□□□□ -0.61
CPNE8-203ENST00000538596 NTNG1Q9Y2I2 539 aa11.27□□□□□ -0.61
CPNE8-203ENST00000538596 MDC1Q14676 2089 aaKnown RBP11.27□□□□□ -0.61
CPNE8-203ENST00000538596 MN1Q10571 1320 aaPredicted RBP11.27□□□□□ -0.61
CPNE8-203ENST00000538596 A0A1W2PQ09 198 aa11.26□□□□□ -0.61
CPNE8-203ENST00000538596 A0A1W2PR48 441 aa11.26□□□□□ -0.61
CPNE8-203ENST00000538596 ERI3O43414 337 aaKnown RBP11.26□□□□□ -0.61
CPNE8-203ENST00000538596 CH25HO95992 272 aa11.26□□□□□ -0.61
CPNE8-203ENST00000538596 PPP2R1BP30154 601 aa11.26□□□□□ -0.61
CPNE8-203ENST00000538596 SDC2P34741 201 aa11.26□□□□□ -0.61
CPNE8-203ENST00000538596 MAN2A2P49641 1150 aa11.26□□□□□ -0.61
CPNE8-203ENST00000538596 LBX1P52954 281 aa11.26□□□□□ -0.61
CPNE8-203ENST00000538596 TAS2R38P59533 333 aa11.26□□□□□ -0.61
CPNE8-203ENST00000538596 MLLT11Q13015 90 aaPredicted RBP11.26□□□□□ -0.61
CPNE8-203ENST00000538596 SLAMF1Q13291 335 aa11.26□□□□□ -0.61
CPNE8-203ENST00000538596 ARHGAP19Q14CB8 494 aa11.26□□□□□ -0.61
CPNE8-203ENST00000538596 ADAMTSL4Q6UY14 1074 aa11.26□□□□□ -0.61
CPNE8-203ENST00000538596 FAM92BQ6ZTR7 304 aa11.26□□□□□ -0.61
CPNE8-203ENST00000538596 KRT73Q86Y46 540 aa11.26□□□□□ -0.61
CPNE8-203ENST00000538596 FAM26EQ8N5C1 309 aa11.26□□□□□ -0.61
CPNE8-203ENST00000538596 FLCNQ8NFG4 579 aa11.26□□□□□ -0.61
CPNE8-203ENST00000538596 OR8D4Q8NGM9 314 aa11.26□□□□□ -0.61
CPNE8-203ENST00000538596 OR2A1Q8NGT9 310 aa11.26□□□□□ -0.61
CPNE8-203ENST00000538596 SUN3Q8TAQ9 357 aa11.26□□□□□ -0.61
CPNE8-203ENST00000538596 CCDC32Q9BV29 185 aa11.26□□□□□ -0.61
CPNE8-203ENST00000538596 POLDIP3Q9BY77 421 aaKnown RBP11.26□□□□□ -0.61
CPNE8-203ENST00000538596 MMP28Q9H239 520 aa11.26□□□□□ -0.61
CPNE8-203ENST00000538596 MIXL1Q9H2W2 232 aa11.26□□□□□ -0.61
CPNE8-203ENST00000538596 TP63Q9H3D4 680 aaPredicted RBP11.26□□□□□ -0.61
CPNE8-203ENST00000538596 PRSS16Q9NQE7 514 aa11.26□□□□□ -0.61
CPNE8-203ENST00000538596 IL20RAQ9UHF4 553 aa11.26□□□□□ -0.61
CPNE8-203ENST00000538596 WBP11Q9Y2W2 641 aaKnown RBP11.26□□□□□ -0.61
CPNE8-203ENST00000538596 SCN2AQ99250 2005 aa11.26□□□□□ -0.61
CPNE8-203ENST00000538596 A0A087WUU8 490 aa11.26□□□□□ -0.61
CPNE8-203ENST00000538596 MAN2B1O00754 1011 aa11.26□□□□□ -0.61
CPNE8-203ENST00000538596 RAB36O95755 333 aa11.26□□□□□ -0.61
CPNE8-203ENST00000538596 PAK4O96013 591 aaPredicted RBP11.26□□□□□ -0.61
CPNE8-203ENST00000538596 DRD3P35462 400 aa11.26□□□□□ -0.61
CPNE8-203ENST00000538596 GAS1P54826 345 aa11.26□□□□□ -0.61
CPNE8-203ENST00000538596 C1DQ13901 141 aaKnown RBP11.26□□□□□ -0.61
CPNE8-203ENST00000538596 ARMC4Q5T2S8 1044 aa11.26□□□□□ -0.61
CPNE8-203ENST00000538596 PRICKLE2Q7Z3G6 844 aa11.26□□□□□ -0.61
CPNE8-203ENST00000538596 RASSF5Q8WWW0 418 aa11.26□□□□□ -0.61
CPNE8-203ENST00000538596 SUSD6Q92537 303 aa11.26□□□□□ -0.61
CPNE8-203ENST00000538596 FGF11Q92914 225 aa11.26□□□□□ -0.61
CPNE8-203ENST00000538596 EFHD2Q96C19 240 aaPredicted RBP11.26□□□□□ -0.61
CPNE8-203ENST00000538596 ZNF486Q96H40 463 aaPredicted RBP11.26□□□□□ -0.61
CPNE8-203ENST00000538596 SRRQ9GZT4 340 aa11.26□□□□□ -0.61
CPNE8-203ENST00000538596 SLC9A8Q9Y2E8 581 aa11.26□□□□□ -0.61
CPNE8-203ENST00000538596 A0A1W2PQL4 384 aaPredicted RBP11.26□□□□□ -0.61
CPNE8-203ENST00000538596 CPSF4LA6NMK7 179 aaKnown RBP11.26□□□□□ -0.61
CPNE8-203ENST00000538596 MID1O15344 667 aa11.26□□□□□ -0.61
CPNE8-203ENST00000538596 LGI1O95970 557 aa11.26□□□□□ -0.61
CPNE8-203ENST00000538596 IL7P13232 177 aa11.26□□□□□ -0.61
CPNE8-203ENST00000538596 SOX18P35713 384 aa11.26□□□□□ -0.61
CPNE8-203ENST00000538596 HTR3AP46098 478 aa11.26□□□□□ -0.61
CPNE8-203ENST00000538596 SMIM11AP58511 58 aa11.26□□□□□ -0.61
CPNE8-203ENST00000538596 RAB8AP61006 207 aa11.26□□□□□ -0.61
CPNE8-203ENST00000538596 CDK5Q00535 292 aa11.26□□□□□ -0.61
CPNE8-203ENST00000538596 RUNX1T1Q06455 604 aa11.26□□□□□ -0.61
CPNE8-203ENST00000538596 HYAL2Q12891 473 aa11.26□□□□□ -0.61
CPNE8-203ENST00000538596 VRK2Q86Y07 508 aa11.26□□□□□ -0.61
CPNE8-203ENST00000538596 SLC25A46Q96AG3 418 aa11.26□□□□□ -0.61
CPNE8-203ENST00000538596 C1GALT1C1Q96EU7 318 aa11.26□□□□□ -0.61
CPNE8-203ENST00000538596 DMRTB1Q96MA1 342 aa11.26□□□□□ -0.61
CPNE8-203ENST00000538596 C11orf49Q9H6J7 331 aa11.26□□□□□ -0.61
CPNE8-203ENST00000538596 PLEKHB1Q9UF11 243 aaPredicted RBP11.26□□□□□ -0.61
CPNE8-203ENST00000538596 DIMT1Q9UNQ2 313 aaKnown RBP11.26□□□□□ -0.61
CPNE8-203ENST00000538596 TRAPPC4Q9Y296 219 aa11.26□□□□□ -0.61
CPNE8-203ENST00000538596 CMAHPQ9Y471 501 aa11.26□□□□□ -0.61
CPNE8-203ENST00000538596 MUC22E2RYF6 1773 aaPredicted RBP11.25□□□□□ -0.61
CPNE8-203ENST00000538596 NARSO43776 548 aaKnown RBP11.25□□□□□ -0.61
CPNE8-203ENST00000538596 RPN2P04844 631 aa11.25□□□□□ -0.61
CPNE8-203ENST00000538596 SNRPNP63162 240 aaKnown RBP11.25□□□□□ -0.61
CPNE8-203ENST00000538596 EFNB1P98172 346 aa11.25□□□□□ -0.61
CPNE8-203ENST00000538596 PRDX1Q06830 199 aaKnown RBP11.25□□□□□ -0.61
CPNE8-203ENST00000538596 KHDRBS1Q07666 443 aaKnown RBP eCLIP11.25□□□□□ -0.61
CPNE8-203ENST00000538596 GPR50Q13585 617 aa11.25□□□□□ -0.61
CPNE8-203ENST00000538596 KRR1Q13601 381 aaKnown RBP11.25□□□□□ -0.61
CPNE8-203ENST00000538596 ATAD3CQ5T2N8 411 aa11.25□□□□□ -0.61
CPNE8-203ENST00000538596 C1orf94Q6P1W5 598 aa11.25□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 23.2 ms