RNA–Protein interactions for RNA: ENST00000538280.1

DDB1-211, Transcript of damage specific DNA binding protein 1, humanhuman

TSL 3

Gene DDB1, Length 227 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDB1-211ENST00000538280 ZNF528Q3MIS6 628 aa8.7□□□□□ -1.02
DDB1-211ENST00000538280 SLC25A30Q5SVS4 291 aa8.7□□□□□ -1.02
DDB1-211ENST00000538280 TMEM236Q5W0B7 351 aa8.7□□□□□ -1.02
DDB1-211ENST00000538280 NIPAL1Q6NVV3 410 aa8.7□□□□□ -1.02
DDB1-211ENST00000538280 TUBA3EQ6PEY2 450 aa8.7□□□□□ -1.02
DDB1-211ENST00000538280 USP43Q70EL4 1123 aa8.7□□□□□ -1.02
DDB1-211ENST00000538280 ADCK2Q7Z695 626 aa8.7□□□□□ -1.02
DDB1-211ENST00000538280 BTLAQ7Z6A9 289 aa8.7□□□□□ -1.02
DDB1-211ENST00000538280 MRGPREQ86SM8 312 aa8.7□□□□□ -1.02
DDB1-211ENST00000538280 ADCK1Q86TW2 530 aa8.7□□□□□ -1.02
DDB1-211ENST00000538280 KRT73Q86Y46 540 aa8.7□□□□□ -1.02
DDB1-211ENST00000538280 RBM45Q8IUH3 476 aaKnown RBP8.7□□□□□ -1.02
DDB1-211ENST00000538280 NLGN4XQ8N0W4 816 aa8.7□□□□□ -1.02
DDB1-211ENST00000538280 STX19Q8N4C7 294 aa8.7□□□□□ -1.02
DDB1-211ENST00000538280 TMCO5AQ8N6Q1 288 aa8.7□□□□□ -1.02
DDB1-211ENST00000538280 ACOT4Q8N9L9 421 aa8.7□□□□□ -1.02
DDB1-211ENST00000538280 MORN4Q8NDC4 146 aa8.7□□□□□ -1.02
DDB1-211ENST00000538280 SRFBP1Q8NEF9 429 aaKnown RBP8.7□□□□□ -1.02
DDB1-211ENST00000538280 B3GNT7Q8NFL0 401 aa8.7□□□□□ -1.02
DDB1-211ENST00000538280 FLVCR1-AS1Q8TAF5 88 aa8.7□□□□□ -1.02
DDB1-211ENST00000538280 ZHX1-C8orf76Q96EF9 292 aa8.7□□□□□ -1.02
DDB1-211ENST00000538280 CNRIP1Q96F85 164 aaPredicted RBP8.7□□□□□ -1.02
DDB1-211ENST00000538280 SMIM10Q96HG1 83 aa8.7□□□□□ -1.02
DDB1-211ENST00000538280 C10orf90Q96M02 699 aa8.7□□□□□ -1.02
DDB1-211ENST00000538280 PRRC1Q96M27 445 aa8.7□□□□□ -1.02
DDB1-211ENST00000538280 BBS4Q96RK4 519 aa8.7□□□□□ -1.02
DDB1-211ENST00000538280 SPATA5L1Q9BVQ7 753 aa8.7□□□□□ -1.02
DDB1-211ENST00000538280 TRMT61BQ9BVS5 477 aaKnown RBP8.7□□□□□ -1.02
DDB1-211ENST00000538280 TAPBPLQ9BX59 468 aa8.7□□□□□ -1.02
DDB1-211ENST00000538280 PINK1Q9BXM7 581 aa8.7□□□□□ -1.02
DDB1-211ENST00000538280 MKRN2Q9H000 416 aaKnown RBP8.7□□□□□ -1.02
DDB1-211ENST00000538280 RACGAP1Q9H0H5 632 aa8.7□□□□□ -1.02
DDB1-211ENST00000538280 DCSTAMPQ9H295 470 aa8.7□□□□□ -1.02
DDB1-211ENST00000538280 MMP27Q9H306 513 aa8.7□□□□□ -1.02
DDB1-211ENST00000538280 FGF22Q9HCT0 170 aa8.7□□□□□ -1.02
DDB1-211ENST00000538280 PRDM9Q9NQV7 894 aa8.7□□□□□ -1.02
DDB1-211ENST00000538280 PRDM8Q9NQV8 689 aa8.7□□□□□ -1.02
DDB1-211ENST00000538280 MAN2C1Q9NTJ4 1040 aa8.7□□□□□ -1.02
DDB1-211ENST00000538280 CLN6Q9NWW5 311 aa8.7□□□□□ -1.02
DDB1-211ENST00000538280 MS4A12Q9NXJ0 267 aa8.7□□□□□ -1.02
DDB1-211ENST00000538280 NTMQ9P121 344 aa8.7□□□□□ -1.02
DDB1-211ENST00000538280 SEC14L3Q9UDX4 400 aa8.7□□□□□ -1.02
DDB1-211ENST00000538280 FBXO4Q9UKT5 387 aa8.7□□□□□ -1.02
DDB1-211ENST00000538280 MKLN1Q9UL63 735 aa8.7□□□□□ -1.02
DDB1-211ENST00000538280 SNX7Q9UNH6 387 aa8.7□□□□□ -1.02
DDB1-211ENST00000538280 LSM2Q9Y333 95 aaKnown RBP8.7□□□□□ -1.02
DDB1-211ENST00000538280 ATG4BQ9Y4P1 393 aa8.7□□□□□ -1.02
DDB1-211ENST00000538280 WDFY3Q8IZQ1 3526 aa8.7□□□□□ -1.02
DDB1-211ENST00000538280 GIMAP1-GIMAP5A0A087WTJ2 511 aa8.69□□□□□ -1.02
DDB1-211ENST00000538280 TMEM247A6NEH6 219 aa8.69□□□□□ -1.02
DDB1-211ENST00000538280 OR52A4PA6NMU1 304 aa8.69□□□□□ -1.02
DDB1-211ENST00000538280 PDZK1P1A8MUH7 402 aa8.69□□□□□ -1.02
DDB1-211ENST00000538280 M0R129 80 aa8.69□□□□□ -1.02
DDB1-211ENST00000538280 DSCR3O14972 297 aa8.69□□□□□ -1.02
DDB1-211ENST00000538280 PGRMC2O15173 223 aa8.69□□□□□ -1.02
DDB1-211ENST00000538280 EMC8O43402 210 aa8.69□□□□□ -1.02
DDB1-211ENST00000538280 PROM1O43490 865 aa8.69□□□□□ -1.02
DDB1-211ENST00000538280 ADAM23O75077 832 aa8.69□□□□□ -1.02
DDB1-211ENST00000538280 PRKRAO75569 313 aaKnown RBP8.69□□□□□ -1.02
DDB1-211ENST00000538280 CHRM5P08912 532 aaPredicted RBP8.69□□□□□ -1.02
DDB1-211ENST00000538280 OCM2P0CE71 109 aa8.69□□□□□ -1.02
DDB1-211ENST00000538280 OCMP0CE72 109 aaPredicted RBP8.69□□□□□ -1.02
DDB1-211ENST00000538280 NR2F1P10589 423 aa8.69□□□□□ -1.02
DDB1-211ENST00000538280 POU2F1P14859 743 aa8.69□□□□□ -1.02
DDB1-211ENST00000538280 CSNK2A2P19784 350 aaPredicted RBP8.69□□□□□ -1.02
DDB1-211ENST00000538280 ENDOUP21128 410 aaKnown RBP8.69□□□□□ -1.02
DDB1-211ENST00000538280 CD40LGP29965 261 aa8.69□□□□□ -1.02
DDB1-211ENST00000538280 PPP2R1BP30154 601 aa8.69□□□□□ -1.02
DDB1-211ENST00000538280 TGFBR1P36897 503 aa8.69□□□□□ -1.02
DDB1-211ENST00000538280 RANBP1P43487 201 aa8.69□□□□□ -1.02
DDB1-211ENST00000538280 RGS6P49758 472 aa8.69□□□□□ -1.02
DDB1-211ENST00000538280 STXBP1P61764 594 aaKnown RBP8.69□□□□□ -1.02
DDB1-211ENST00000538280 EFNB1P98172 346 aa8.69□□□□□ -1.02
DDB1-211ENST00000538280 IFITM3Q01628 133 aa8.69□□□□□ -1.02
DDB1-211ENST00000538280 SPEM2Q0P670 501 aa8.69□□□□□ -1.02
DDB1-211ENST00000538280 SRSF5Q13243 272 aaKnown RBP8.69□□□□□ -1.02
DDB1-211ENST00000538280 DOC2BQ14184 412 aa8.69□□□□□ -1.02
DDB1-211ENST00000538280 LRRC32Q14392 662 aa8.69□□□□□ -1.02
DDB1-211ENST00000538280 NFATC4Q14934 902 aa8.69□□□□□ -1.02
DDB1-211ENST00000538280 GPR19Q15760 415 aa8.69□□□□□ -1.02
DDB1-211ENST00000538280 ZNF404Q494X3 552 aa8.69□□□□□ -1.02
DDB1-211ENST00000538280 ARMCX4Q5H9R4 360 aa8.69□□□□□ -1.02
DDB1-211ENST00000538280 ENTPD8Q5MY95 495 aa8.69□□□□□ -1.02
DDB1-211ENST00000538280 MFSD4BQ5TF39 518 aa8.69□□□□□ -1.02
DDB1-211ENST00000538280 PLAG1Q6DJT9 500 aa8.69□□□□□ -1.02
DDB1-211ENST00000538280 C1orf94Q6P1W5 598 aa8.69□□□□□ -1.02
DDB1-211ENST00000538280 BHLHB9Q6PI77 547 aa8.69□□□□□ -1.02
DDB1-211ENST00000538280 DEF8Q6ZN54 512 aa8.69□□□□□ -1.02
DDB1-211ENST00000538280 PTCHD4Q6ZW05 846 aa8.69□□□□□ -1.02
DDB1-211ENST00000538280 USP30Q70CQ3 517 aa8.69□□□□□ -1.02
DDB1-211ENST00000538280 VN1R4Q7Z5H5 301 aa8.69□□□□□ -1.02
DDB1-211ENST00000538280 ATCAYQ86WG3 371 aa8.69□□□□□ -1.02
DDB1-211ENST00000538280 NRROSQ86YC3 692 aa8.69□□□□□ -1.02
DDB1-211ENST00000538280 FAM20CQ8IXL6 584 aa8.69□□□□□ -1.02
DDB1-211ENST00000538280 KBTBD8Q8NFY9 601 aa8.69□□□□□ -1.02
DDB1-211ENST00000538280 OR5D16Q8NGK9 328 aa8.69□□□□□ -1.02
DDB1-211ENST00000538280 OR8K5Q8NH50 307 aa8.69□□□□□ -1.02
DDB1-211ENST00000538280 OR14C36Q8NHC7 312 aa8.69□□□□□ -1.02
DDB1-211ENST00000538280 VANGL1Q8TAA9 524 aaPredicted RBP8.69□□□□□ -1.02
DDB1-211ENST00000538280 SLC7A13Q8TCU3 470 aa8.69□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 23.6 ms