RNA–Protein interactions for RNA: ENST00000538136.1

MSH6-209, Transcript of mutS homolog 6, humanhuman

TSL 2 BASIC

Gene MSH6, Length 4,055 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH6-209ENST00000538136 OR51I1Q9H343 314 aa6.76□□□□□ -1.33
MSH6-209ENST00000538136 SUCOQ9UBS9 1254 aaKnown RBP6.76□□□□□ -1.33
MSH6-209ENST00000538136 USP22Q9UPT9 525 aa6.76□□□□□ -1.33
MSH6-209ENST00000538136 IGKV1-8A0A0C4DH67 115 aa6.76□□□□□ -1.33
MSH6-209ENST00000538136 PRSS51A0A1B0GVH4 220 aa6.76□□□□□ -1.33
MSH6-209ENST00000538136 AP3D1O14617 1153 aa6.76□□□□□ -1.33
MSH6-209ENST00000538136 NPHS1O60500 1241 aa6.76□□□□□ -1.33
MSH6-209ENST00000538136 FAM107AO95990 144 aa6.76□□□□□ -1.33
MSH6-209ENST00000538136 STSP08842 583 aa6.76□□□□□ -1.33
MSH6-209ENST00000538136 CYP4B1P13584 511 aa6.76□□□□□ -1.33
MSH6-209ENST00000538136 EEF1B2P24534 225 aaKnown RBP6.76□□□□□ -1.33
MSH6-209ENST00000538136 GUCA1AP43080 201 aaPredicted RBP6.76□□□□□ -1.33
MSH6-209ENST00000538136 SLC18A1P54219 525 aa6.76□□□□□ -1.33
MSH6-209ENST00000538136 TAS2R41P59536 307 aa6.76□□□□□ -1.33
MSH6-209ENST00000538136 HBA1P69905 142 aa6.76□□□□□ -1.33
MSH6-209ENST00000538136 HSF1Q00613 529 aa6.76□□□□□ -1.33
MSH6-209ENST00000538136 CLEC12AQ5QGZ9 265 aa6.76□□□□□ -1.33
MSH6-209ENST00000538136 PLEKHM3Q6ZWE6 761 aa6.76□□□□□ -1.33
MSH6-209ENST00000538136 CPEB2Q7Z5Q1 589 aaKnown RBP6.76□□□□□ -1.33
MSH6-209ENST00000538136 TLCD1Q96CP7 247 aa6.76□□□□□ -1.33
MSH6-209ENST00000538136 ZNF501Q96CX3 271 aaPredicted RBP6.76□□□□□ -1.33
MSH6-209ENST00000538136 PLEKHA8Q96JA3 519 aa6.76□□□□□ -1.33
MSH6-209ENST00000538136 TUBB1Q9H4B7 451 aa6.76□□□□□ -1.33
MSH6-209ENST00000538136 POPDC3Q9HBV1 291 aa6.76□□□□□ -1.33
MSH6-209ENST00000538136 SLC6A5Q9Y345 797 aa6.76□□□□□ -1.33
MSH6-209ENST00000538136 CFAP46Q8IYW2 2715 aa6.76□□□□□ -1.33
MSH6-209ENST00000538136 LOC400499M0QZD8 3231 aa6.76□□□□□ -1.33
MSH6-209ENST00000538136 DCHS1Q96JQ0 3298 aa6.76□□□□□ -1.33
MSH6-209ENST00000538136 PRR19A6NJB7 356 aa6.76□□□□□ -1.33
MSH6-209ENST00000538136 MCIDASD6RGH6 385 aa6.76□□□□□ -1.33
MSH6-209ENST00000538136 VPS4BO75351 444 aa6.76□□□□□ -1.33
MSH6-209ENST00000538136 AGFG2O95081 481 aa6.76□□□□□ -1.33
MSH6-209ENST00000538136 CH25HO95992 272 aa6.76□□□□□ -1.33
MSH6-209ENST00000538136 PRPS2P11908 318 aa6.76□□□□□ -1.33
MSH6-209ENST00000538136 HOXA6P31267 233 aa6.76□□□□□ -1.33
MSH6-209ENST00000538136 PLA2G5P39877 138 aa6.76□□□□□ -1.33
MSH6-209ENST00000538136 RRADP55042 308 aa6.76□□□□□ -1.33
MSH6-209ENST00000538136 GFOD2Q3B7J2 385 aa6.76□□□□□ -1.33
MSH6-209ENST00000538136 TUBB8Q3ZCM7 444 aa6.76□□□□□ -1.33
MSH6-209ENST00000538136 GXYLT1Q4G148 440 aa6.76□□□□□ -1.33
MSH6-209ENST00000538136 GPR155Q7Z3F1 870 aa6.76□□□□□ -1.33
MSH6-209ENST00000538136 IGFN1Q86VF2 1251 aa6.76□□□□□ -1.33
MSH6-209ENST00000538136 FJX1Q86VR8 437 aa6.76□□□□□ -1.33
MSH6-209ENST00000538136 FAM98AQ8NCA5 519 aaKnown RBP6.76□□□□□ -1.33
MSH6-209ENST00000538136 PYDC1Q8WXC3 89 aa6.76□□□□□ -1.33
MSH6-209ENST00000538136 TTTY10Q9BZA0 68 aa6.76□□□□□ -1.33
MSH6-209ENST00000538136 NXF5Q9H1B4 397 aaKnown RBP6.76□□□□□ -1.33
MSH6-209ENST00000538136 EPB41L1Q9H4G0 881 aa6.76□□□□□ -1.33
MSH6-209ENST00000538136 LTBP2Q14767 1821 aa6.76□□□□□ -1.33
MSH6-209ENST00000538136 GXYLT2A0PJZ3 443 aa6.76□□□□□ -1.33
MSH6-209ENST00000538136 KLF11O14901 512 aa6.76□□□□□ -1.33
MSH6-209ENST00000538136 OR10H3O60404 316 aa6.76□□□□□ -1.33
MSH6-209ENST00000538136 KRT75O95678 551 aa6.76□□□□□ -1.33
MSH6-209ENST00000538136 CD46P15529 392 aa6.76□□□□□ -1.33
MSH6-209ENST00000538136 HRH2P25021 359 aa6.76□□□□□ -1.33
MSH6-209ENST00000538136 SLC9A3P48764 834 aa6.76□□□□□ -1.33
MSH6-209ENST00000538136 GNA13Q14344 377 aa6.76□□□□□ -1.33
MSH6-209ENST00000538136 SYPL1Q16563 259 aa6.76□□□□□ -1.33
MSH6-209ENST00000538136 ANXA8L1Q5VT79 327 aa6.76□□□□□ -1.33
MSH6-209ENST00000538136 TIFABQ6ZNK6 161 aa6.76□□□□□ -1.33
MSH6-209ENST00000538136 MARCH3Q86UD3 253 aa6.76□□□□□ -1.33
MSH6-209ENST00000538136 EIF1ADQ8N9N8 165 aaKnown RBP6.76□□□□□ -1.33
MSH6-209ENST00000538136 FDCSPQ8NFU4 85 aa6.76□□□□□ -1.33
MSH6-209ENST00000538136 OR10A5Q9H207 317 aa6.76□□□□□ -1.33
MSH6-209ENST00000538136 ADGRE2Q9UHX3 823 aa6.76□□□□□ -1.33
MSH6-209ENST00000538136 PTPRSQ13332 1948 aa6.75□□□□□ -1.33
MSH6-209ENST00000538136 FANCMQ8IYD8 2048 aa6.75□□□□□ -1.33
MSH6-209ENST00000538136 PCDH15Q96QU1 1955 aa6.75□□□□□ -1.33
MSH6-209ENST00000538136 A0A1W2PPV9 198 aa6.75□□□□□ -1.33
MSH6-209ENST00000538136 OR2A25A4D2G3 310 aa6.75□□□□□ -1.33
MSH6-209ENST00000538136 TP53I11O14683 189 aa6.75□□□□□ -1.33
MSH6-209ENST00000538136 IGLV3-19P01714 112 aa6.75□□□□□ -1.33
MSH6-209ENST00000538136 SBK3P0C264 359 aa6.75□□□□□ -1.33
MSH6-209ENST00000538136 GIMD1P0DJR0 217 aa6.75□□□□□ -1.33
MSH6-209ENST00000538136 CD1EP15812 388 aa6.75□□□□□ -1.33
MSH6-209ENST00000538136 SLC26A3P40879 764 aa6.75□□□□□ -1.33
MSH6-209ENST00000538136 CHRNB3Q05901 458 aa6.75□□□□□ -1.33
MSH6-209ENST00000538136 DBPQ10586 325 aaPredicted RBP6.75□□□□□ -1.33
MSH6-209ENST00000538136 EIF3IQ13347 325 aaKnown RBP6.75□□□□□ -1.33
MSH6-209ENST00000538136 ZNF311Q5JNZ3 666 aa6.75□□□□□ -1.33
MSH6-209ENST00000538136 TMEM154Q6P9G4 183 aa6.75□□□□□ -1.33
MSH6-209ENST00000538136 PDSS2Q86YH6 399 aa6.75□□□□□ -1.33
MSH6-209ENST00000538136 PEX5LQ8IYB4 626 aa6.75□□□□□ -1.33
MSH6-209ENST00000538136 ZNF687Q8N1G0 1237 aa6.75□□□□□ -1.33
MSH6-209ENST00000538136 C12orf49Q9H741 205 aa6.75□□□□□ -1.33
MSH6-209ENST00000538136 ZNF225Q9UK10 706 aa6.75□□□□□ -1.33
MSH6-209ENST00000538136 HEATR5BQ9P2D3 2071 aa6.75□□□□□ -1.33
MSH6-209ENST00000538136 PLCE1Q9P212 2302 aa6.75□□□□□ -1.33
MSH6-209ENST00000538136 DSCR3O14972 297 aa6.75□□□□□ -1.33
MSH6-209ENST00000538136 HIST1H2ABP04908 130 aa6.75□□□□□ -1.33
MSH6-209ENST00000538136 CSRP1P21291 193 aaKnown RBP6.75□□□□□ -1.33
MSH6-209ENST00000538136 PTPN4P29074 926 aa6.75□□□□□ -1.33
MSH6-209ENST00000538136 CPOXP36551 454 aa6.75□□□□□ -1.33
MSH6-209ENST00000538136 IDH2P48735 452 aaKnown RBP6.75□□□□□ -1.33
MSH6-209ENST00000538136 CLNS1AP54105 237 aaKnown RBP6.75□□□□□ -1.33
MSH6-209ENST00000538136 CASP6P55212 293 aa6.75□□□□□ -1.33
MSH6-209ENST00000538136 POU6F2P78424 691 aaPredicted RBP6.75□□□□□ -1.33
MSH6-209ENST00000538136 C1DQ13901 141 aaKnown RBP6.75□□□□□ -1.33
MSH6-209ENST00000538136 IL11RAQ14626 422 aa6.75□□□□□ -1.33
MSH6-209ENST00000538136 SLC5A12Q1EHB4 618 aa6.75□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 42.8 ms