RNA–Protein interactions for RNA: ENST00000535958.1

TNFRSF1A-207, Transcript of TNF receptor superfamily member 1A, humanhuman

TSL 4

Gene TNFRSF1A, Length 568 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF1A-207ENST00000535958 ABCB1P08183 1280 aaPredicted RBP11.81□□□□□ -0.52
TNFRSF1A-207ENST00000535958 CT62P0C5K7 136 aa11.81□□□□□ -0.52
TNFRSF1A-207ENST00000535958 CPN1P15169 458 aa11.81□□□□□ -0.52
TNFRSF1A-207ENST00000535958 CHMP24386 653 aa11.81□□□□□ -0.52
TNFRSF1A-207ENST00000535958 KRT20P35900 424 aa11.81□□□□□ -0.52
TNFRSF1A-207ENST00000535958 GMPRP36959 345 aa11.81□□□□□ -0.52
TNFRSF1A-207ENST00000535958 NEK2P51955 445 aa11.81□□□□□ -0.52
TNFRSF1A-207ENST00000535958 CCNG1P51959 295 aa11.81□□□□□ -0.52
TNFRSF1A-207ENST00000535958 GNG11P61952 73 aa11.81□□□□□ -0.52
TNFRSF1A-207ENST00000535958 FOXF2Q12947 444 aa11.81□□□□□ -0.52
TNFRSF1A-207ENST00000535958 DLG1Q12959 904 aa11.81□□□□□ -0.52
TNFRSF1A-207ENST00000535958 IFT88Q13099 833 aa11.81□□□□□ -0.52
TNFRSF1A-207ENST00000535958 SNTA1Q13424 505 aa11.81□□□□□ -0.52
TNFRSF1A-207ENST00000535958 CCNYL2Q5T2Q4 361 aa11.81□□□□□ -0.52
TNFRSF1A-207ENST00000535958 CYS1Q717R9 158 aa11.81□□□□□ -0.52
TNFRSF1A-207ENST00000535958 GOLGA7Q7Z5G4 137 aa11.81□□□□□ -0.52
TNFRSF1A-207ENST00000535958 ZNF615Q8N8J6 731 aa11.81□□□□□ -0.52
TNFRSF1A-207ENST00000535958 KCTD4Q8WVF5 259 aa11.81□□□□□ -0.52
TNFRSF1A-207ENST00000535958 ZNF592Q92610 1267 aa11.81□□□□□ -0.52
TNFRSF1A-207ENST00000535958 WNT2BQ93097 391 aa11.81□□□□□ -0.52
TNFRSF1A-207ENST00000535958 ADIPOR1Q96A54 375 aa11.81□□□□□ -0.52
TNFRSF1A-207ENST00000535958 NXNL1Q96CM4 212 aa11.81□□□□□ -0.52
TNFRSF1A-207ENST00000535958 TMCO6Q96DC7 493 aa11.81□□□□□ -0.52
TNFRSF1A-207ENST00000535958 OMA1Q96E52 524 aa11.81□□□□□ -0.52
TNFRSF1A-207ENST00000535958 SFXN2Q96NB2 322 aa11.81□□□□□ -0.52
TNFRSF1A-207ENST00000535958 FAM111AQ96PZ2 611 aa11.81□□□□□ -0.52
TNFRSF1A-207ENST00000535958 ITPAQ9BY32 194 aa11.81□□□□□ -0.52
TNFRSF1A-207ENST00000535958 NXF5Q9H1B4 397 aaKnown RBP11.81□□□□□ -0.52
TNFRSF1A-207ENST00000535958 GALNT9Q9HCQ5 603 aa11.81□□□□□ -0.52
TNFRSF1A-207ENST00000535958 PFDN4Q9NQP4 134 aa11.81□□□□□ -0.52
TNFRSF1A-207ENST00000535958 PSD3Q9NYI0 1048 aa11.81□□□□□ -0.52
TNFRSF1A-207ENST00000535958 ZNF226Q9NYT6 803 aa11.81□□□□□ -0.52
TNFRSF1A-207ENST00000535958 FETUBQ9UGM5 382 aa11.81□□□□□ -0.52
TNFRSF1A-207ENST00000535958 DKKL1Q9UK85 242 aa11.81□□□□□ -0.52
TNFRSF1A-207ENST00000535958 RNF11Q9Y3C5 154 aa11.81□□□□□ -0.52
TNFRSF1A-207ENST00000535958 EXPH5Q8NEV8 1989 aa11.8□□□□□ -0.52
TNFRSF1A-207ENST00000535958 KIAA1549Q9HCM3 1950 aa11.8□□□□□ -0.52
TNFRSF1A-207ENST00000535958 TP73O15350 636 aa11.8□□□□□ -0.52
TNFRSF1A-207ENST00000535958 ICOSLGO75144 302 aa11.8□□□□□ -0.52
TNFRSF1A-207ENST00000535958 ERAL1O75616 437 aaKnown RBP11.8□□□□□ -0.52
TNFRSF1A-207ENST00000535958 SMNDC1O75940 238 aaKnown RBP eCLIP11.8□□□□□ -0.52
TNFRSF1A-207ENST00000535958 KLK1P06870 262 aa11.8□□□□□ -0.52
TNFRSF1A-207ENST00000535958 FPR1P21462 350 aa11.8□□□□□ -0.52
TNFRSF1A-207ENST00000535958 CNTFP26441 200 aa11.8□□□□□ -0.52
TNFRSF1A-207ENST00000535958 MAPK12P53778 367 aa11.8□□□□□ -0.52
TNFRSF1A-207ENST00000535958 PPP2R2BQ00005 443 aa11.8□□□□□ -0.52
TNFRSF1A-207ENST00000535958 ACAP2Q15057 778 aa11.8□□□□□ -0.52
TNFRSF1A-207ENST00000535958 UAP1Q16222 522 aaPredicted RBP11.8□□□□□ -0.52
TNFRSF1A-207ENST00000535958 TMEM81Q6P7N7 255 aa11.8□□□□□ -0.52
TNFRSF1A-207ENST00000535958 TRIM42Q8IWZ5 723 aa11.8□□□□□ -0.52
TNFRSF1A-207ENST00000535958 LRRN4CLQ8ND94 238 aa11.8□□□□□ -0.52
TNFRSF1A-207ENST00000535958 WDR20Q8TBZ3 569 aa11.8□□□□□ -0.52
TNFRSF1A-207ENST00000535958 LCORQ96JN0 433 aaPredicted RBP11.8□□□□□ -0.52
TNFRSF1A-207ENST00000535958 CCL19Q99731 98 aa11.8□□□□□ -0.52
TNFRSF1A-207ENST00000535958 ERP44Q9BS26 406 aa11.8□□□□□ -0.52
TNFRSF1A-207ENST00000535958 UBTD1Q9HAC8 227 aa11.8□□□□□ -0.52
TNFRSF1A-207ENST00000535958 TAS2R10Q9NYW0 307 aa11.8□□□□□ -0.52
TNFRSF1A-207ENST00000535958 EHD3Q9NZN3 535 aa11.8□□□□□ -0.52
TNFRSF1A-207ENST00000535958 RNF14Q9UBS8 474 aa11.8□□□□□ -0.52
TNFRSF1A-207ENST00000535958 PRODH2Q9UF12 536 aa11.8□□□□□ -0.52
TNFRSF1A-207ENST00000535958 PSME2Q9UL46 239 aa11.8□□□□□ -0.52
TNFRSF1A-207ENST00000535958 A0A1W2PS29 197 aa11.79□□□□□ -0.52
TNFRSF1A-207ENST00000535958 C1orf226A1L170 272 aa11.79□□□□□ -0.52
TNFRSF1A-207ENST00000535958 C2orf72A6NCS6 295 aa11.79□□□□□ -0.52
TNFRSF1A-207ENST00000535958 FAM187AA6NFU0 413 aa11.79□□□□□ -0.52
TNFRSF1A-207ENST00000535958 SLCO1A2P46721 670 aa11.79□□□□□ -0.52
TNFRSF1A-207ENST00000535958 MRPS25P82663 173 aaKnown RBP11.79□□□□□ -0.52
TNFRSF1A-207ENST00000535958 IRF9Q00978 393 aa11.79□□□□□ -0.52
TNFRSF1A-207ENST00000535958 CAV1Q03135 178 aa11.79□□□□□ -0.52
TNFRSF1A-207ENST00000535958 CBLBQ13191 982 aa11.79□□□□□ -0.52
TNFRSF1A-207ENST00000535958 C10orf62Q5T681 223 aaPredicted RBP11.79□□□□□ -0.52
TNFRSF1A-207ENST00000535958 FRG2Q64ET8 278 aa11.79□□□□□ -0.52
TNFRSF1A-207ENST00000535958 OR2A2Q6IF42 318 aa11.79□□□□□ -0.52
TNFRSF1A-207ENST00000535958 METTL2BQ6P1Q9 378 aaKnown RBP11.79□□□□□ -0.52
TNFRSF1A-207ENST00000535958 LRRC75A-AS1Q8N1F1 130 aa11.79□□□□□ -0.52
TNFRSF1A-207ENST00000535958 CNEP1R1Q8N9A8 125 aa11.79□□□□□ -0.52
TNFRSF1A-207ENST00000535958 L3MBTL4Q8NA19 623 aa11.79□□□□□ -0.52
TNFRSF1A-207ENST00000535958 FBF1Q8TES7 1133 aa11.79□□□□□ -0.52
TNFRSF1A-207ENST00000535958 SLC44A1Q8WWI5 657 aa11.79□□□□□ -0.52
TNFRSF1A-207ENST00000535958 KLHL29Q96CT2 875 aa11.79□□□□□ -0.52
TNFRSF1A-207ENST00000535958 MRRFQ96E11 262 aaKnown RBP11.79□□□□□ -0.52
TNFRSF1A-207ENST00000535958 Q96MF0 132 aa11.79□□□□□ -0.52
TNFRSF1A-207ENST00000535958 CDK15Q96Q40 435 aa11.79□□□□□ -0.52
TNFRSF1A-207ENST00000535958 FRG2BQ96QU4 278 aa11.79□□□□□ -0.52
TNFRSF1A-207ENST00000535958 NODALQ96S42 347 aa11.79□□□□□ -0.52
TNFRSF1A-207ENST00000535958 MED18Q9BUE0 208 aa11.79□□□□□ -0.52
TNFRSF1A-207ENST00000535958 BDH2Q9BUT1 245 aa11.79□□□□□ -0.52
TNFRSF1A-207ENST00000535958 FAIM2Q9BWQ8 316 aa11.79□□□□□ -0.52
TNFRSF1A-207ENST00000535958 MRPL1Q9BYD6 325 aaKnown RBP11.79□□□□□ -0.52
TNFRSF1A-207ENST00000535958 OR2B2Q9GZK3 357 aa11.79□□□□□ -0.52
TNFRSF1A-207ENST00000535958 ELOVL6Q9H5J4 265 aa11.79□□□□□ -0.52
TNFRSF1A-207ENST00000535958 NOL11Q9H8H0 719 aaKnown RBP11.79□□□□□ -0.52
TNFRSF1A-207ENST00000535958 ADAM29Q9UKF5 820 aa11.79□□□□□ -0.52
TNFRSF1A-207ENST00000535958 EXO1Q9UQ84 846 aaKnown RBP11.79□□□□□ -0.52
TNFRSF1A-207ENST00000535958 DTX4Q9Y2E6 619 aa11.79□□□□□ -0.52
TNFRSF1A-207ENST00000535958 UTP11Q9Y3A2 253 aaKnown RBP11.79□□□□□ -0.52
TNFRSF1A-207ENST00000535958 ZNF780BQ9Y6R6 833 aa11.79□□□□□ -0.52
TNFRSF1A-207ENST00000535958 LRRC14BA6NHZ5 514 aa11.78□□□□□ -0.52
TNFRSF1A-207ENST00000535958 H7C1Q1 480 aa11.78□□□□□ -0.52
TNFRSF1A-207ENST00000535958 PLOD2O00469 737 aa11.78□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 20.2 ms