RNA–Protein interactions for RNA: ENST00000534442.5

ECHDC1-223, Transcript of ethylmalonyl-CoA decarboxylase 1, human

TSL 5

Gene ECHDC1, Length 577 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
ECHDC1-223	ENST00000534442	FIBIN	Q8TAL6	211 aa		4.05	□□□□□ -1.76
ECHDC1-223	ENST00000534442	MRAP	Q8TCY5	172 aa		4.05	□□□□□ -1.76
ECHDC1-223	ENST00000534442	FIG4	Q92562	907 aa		4.05	□□□□□ -1.76
ECHDC1-223	ENST00000534442	MTERF3	Q96E29	417 aa		4.05	□□□□□ -1.76
ECHDC1-223	ENST00000534442	CCDC114	Q96M63	670 aa		4.05	□□□□□ -1.76
ECHDC1-223	ENST00000534442	ACKR4	Q9NPB9	350 aa		4.05	□□□□□ -1.76
ECHDC1-223	ENST00000534442	FBXO8	Q9NRD0	319 aa		4.05	□□□□□ -1.76
ECHDC1-223	ENST00000534442	MED29	Q9NX70	200 aa		4.05	□□□□□ -1.76
ECHDC1-223	ENST00000534442	TMEM9	Q9P0T7	183 aa		4.05	□□□□□ -1.76
ECHDC1-223	ENST00000534442	PLA2G4C	Q9UP65	541 aa		4.05	□□□□□ -1.76
ECHDC1-223	ENST00000534442	DLGAP4	Q9Y2H0	992 aa		4.05	□□□□□ -1.76
ECHDC1-223	ENST00000534442	SPIN1	Q9Y657	262 aa	Predicted RBP	4.05	□□□□□ -1.76
ECHDC1-223	ENST00000534442	DMBT1	Q9UGM3	2413 aa	Predicted RBP	4.05	□□□□□ -1.76
ECHDC1-223	ENST00000534442	HYKK	A2RU49	373 aa		4.04	□□□□□ -1.76
ECHDC1-223	ENST00000534442	CTAGE9	A4FU28	777 aa		4.04	□□□□□ -1.76
ECHDC1-223	ENST00000534442	FAM90A10P	A6NDY2	464 aa		4.04	□□□□□ -1.76
ECHDC1-223	ENST00000534442	SMCO2	A6NFE2	343 aa		4.04	□□□□□ -1.76
ECHDC1-223	ENST00000534442	C15orf62	A8K5M9	175 aa		4.04	□□□□□ -1.76
ECHDC1-223	ENST00000534442	PSMA7	O14818	248 aa		4.04	□□□□□ -1.76
ECHDC1-223	ENST00000534442	POLR1C	O15160	346 aa	Predicted RBP	4.04	□□□□□ -1.76
ECHDC1-223	ENST00000534442	B4GAT1	O43505	415 aa		4.04	□□□□□ -1.76
ECHDC1-223	ENST00000534442	FMO6P	O60774	539 aa		4.04	□□□□□ -1.76
ECHDC1-223	ENST00000534442	ACSL3	O95573	720 aa		4.04	□□□□□ -1.76
ECHDC1-223	ENST00000534442	IGHV2-70	P01814	119 aa		4.04	□□□□□ -1.76
ECHDC1-223	ENST00000534442	CSN3	P07498	182 aa		4.04	□□□□□ -1.76
ECHDC1-223	ENST00000534442	ACAA1	P09110	424 aa	Predicted RBP	4.04	□□□□□ -1.76
ECHDC1-223	ENST00000534442	CTAGE8	P0CG41	777 aa		4.04	□□□□□ -1.76
ECHDC1-223	ENST00000534442	ACP2	P11117	423 aa		4.04	□□□□□ -1.76
ECHDC1-223	ENST00000534442	HNRNPA2B1	P22626	353 aa	Known RBP	4.04	□□□□□ -1.76
ECHDC1-223	ENST00000534442	CBL	P22681	906 aa		4.04	□□□□□ -1.76
ECHDC1-223	ENST00000534442	EEF1B2	P24534	225 aa	Known RBP	4.04	□□□□□ -1.76
ECHDC1-223	ENST00000534442	CYP2F1	P24903	491 aa		4.04	□□□□□ -1.76
ECHDC1-223	ENST00000534442	PSMA3	P25788	255 aa		4.04	□□□□□ -1.76
ECHDC1-223	ENST00000534442	PTPN3	P26045	913 aa		4.04	□□□□□ -1.76
ECHDC1-223	ENST00000534442	CDC25A	P30304	524 aa		4.04	□□□□□ -1.76
ECHDC1-223	ENST00000534442	YWHAB	P31946	246 aa	Known RBP	4.04	□□□□□ -1.76
ECHDC1-223	ENST00000534442	USP8	P40818	1118 aa		4.04	□□□□□ -1.76
ECHDC1-223	ENST00000534442	LHX1	P48742	406 aa		4.04	□□□□□ -1.76
ECHDC1-223	ENST00000534442	MAPK12	P53778	367 aa		4.04	□□□□□ -1.76
ECHDC1-223	ENST00000534442	UBASH3A	P57075	661 aa		4.04	□□□□□ -1.76
ECHDC1-223	ENST00000534442	MAT1A	Q00266	395 aa	Known RBP	4.04	□□□□□ -1.76
ECHDC1-223	ENST00000534442	C17orf67	Q0P5P2	114 aa		4.04	□□□□□ -1.76
ECHDC1-223	ENST00000534442	MEP1B	Q16820	701 aa		4.04	□□□□□ -1.76
ECHDC1-223	ENST00000534442	MFSD12	Q6NUT3	480 aa		4.04	□□□□□ -1.76
ECHDC1-223	ENST00000534442	ARSK	Q6UWY0	536 aa		4.04	□□□□□ -1.76
ECHDC1-223	ENST00000534442	C9orf47	Q6ZRZ4	202 aa		4.04	□□□□□ -1.76
ECHDC1-223	ENST00000534442	MSANTD1	Q6ZTZ1	278 aa		4.04	□□□□□ -1.76
ECHDC1-223	ENST00000534442	OTOA	Q7RTW8	1153 aa		4.04	□□□□□ -1.76
ECHDC1-223	ENST00000534442	KMT5C	Q86Y97	462 aa		4.04	□□□□□ -1.76
ECHDC1-223	ENST00000534442	CTAGE4	Q8IX94	777 aa		4.04	□□□□□ -1.76
ECHDC1-223	ENST00000534442	SUPV3L1	Q8IYB8	786 aa	Known RBP eCLIP	4.04	□□□□□ -1.76
ECHDC1-223	ENST00000534442	CCDC170	Q8IYT3	715 aa		4.04	□□□□□ -1.76
ECHDC1-223	ENST00000534442	FBXL14	Q8N1E6	418 aa		4.04	□□□□□ -1.76
ECHDC1-223	ENST00000534442	THEM5	Q8N1Q8	247 aa		4.04	□□□□□ -1.76
ECHDC1-223	ENST00000534442	L3MBTL4	Q8NA19	623 aa		4.04	□□□□□ -1.76
ECHDC1-223	ENST00000534442	OR4D9	Q8NGE8	314 aa		4.04	□□□□□ -1.76
ECHDC1-223	ENST00000534442	SLC22A8	Q8TCC7	542 aa		4.04	□□□□□ -1.76
ECHDC1-223	ENST00000534442	AGAP11	Q8TF27	550 aa		4.04	□□□□□ -1.76
ECHDC1-223	ENST00000534442	OXNAD1	Q96HP4	312 aa	Predicted RBP	4.04	□□□□□ -1.76
ECHDC1-223	ENST00000534442	SENP8	Q96LD8	212 aa		4.04	□□□□□ -1.76
ECHDC1-223	ENST00000534442	ZNF385A	Q96PM9	386 aa	Known RBP	4.04	□□□□□ -1.76
ECHDC1-223	ENST00000534442	TCHP	Q9BT92	498 aa		4.04	□□□□□ -1.76
ECHDC1-223	ENST00000534442	MLPH	Q9BV36	600 aa	Predicted RBP	4.04	□□□□□ -1.76
ECHDC1-223	ENST00000534442	REG4	Q9BYZ8	158 aa		4.04	□□□□□ -1.76
ECHDC1-223	ENST00000534442	UBTD1	Q9HAC8	227 aa		4.04	□□□□□ -1.76
ECHDC1-223	ENST00000534442	TBC1D7	Q9P0N9	293 aa		4.04	□□□□□ -1.76
ECHDC1-223	ENST00000534442	B3GAT1	Q9P2W7	334 aa		4.04	□□□□□ -1.76
ECHDC1-223	ENST00000534442	TUBGCP4	Q9UGJ1	667 aa		4.04	□□□□□ -1.76
ECHDC1-223	ENST00000534442	TTC41P	Q6P2S7	1318 aa		4.03	□□□□□ -1.76
ECHDC1-223	ENST00000534442		A0A0G2JNG1	304 aa		4.03	□□□□□ -1.76
ECHDC1-223	ENST00000534442	COCH	O43405	550 aa		4.03	□□□□□ -1.76
ECHDC1-223	ENST00000534442	KIAA0754	O94854	1291 aa		4.03	□□□□□ -1.76
ECHDC1-223	ENST00000534442	GOSR1	O95249	250 aa		4.03	□□□□□ -1.76
ECHDC1-223	ENST00000534442	PLEKHA8P1	O95397	391 aa		4.03	□□□□□ -1.76
ECHDC1-223	ENST00000534442	WDPCP	O95876	746 aa		4.03	□□□□□ -1.76
ECHDC1-223	ENST00000534442	TFAP2A	P05549	437 aa		4.03	□□□□□ -1.76
ECHDC1-223	ENST00000534442	LIPF	P07098	398 aa		4.03	□□□□□ -1.76
ECHDC1-223	ENST00000534442	SMIM18	P0DKX4	95 aa		4.03	□□□□□ -1.76
ECHDC1-223	ENST00000534442	FCGR1A	P12314	374 aa		4.03	□□□□□ -1.76
ECHDC1-223	ENST00000534442	PVR	P15151	417 aa		4.03	□□□□□ -1.76
ECHDC1-223	ENST00000534442	GNAZ	P19086	355 aa		4.03	□□□□□ -1.76
ECHDC1-223	ENST00000534442	ALDH4A1	P30038	563 aa		4.03	□□□□□ -1.76
ECHDC1-223	ENST00000534442	CHRNB4	P30926	498 aa		4.03	□□□□□ -1.76
ECHDC1-223	ENST00000534442	DRD3	P35462	400 aa		4.03	□□□□□ -1.76
ECHDC1-223	ENST00000534442	OSTN	P61366	133 aa		4.03	□□□□□ -1.76
ECHDC1-223	ENST00000534442	SEC61A1	P61619	476 aa	Known RBP	4.03	□□□□□ -1.76
ECHDC1-223	ENST00000534442	ZBTB17	Q13105	803 aa		4.03	□□□□□ -1.76
ECHDC1-223	ENST00000534442	SQLE	Q14534	574 aa		4.03	□□□□□ -1.76
ECHDC1-223	ENST00000534442	KIR2DS5	Q14953	304 aa		4.03	□□□□□ -1.76
ECHDC1-223	ENST00000534442	IMMT	Q16891	758 aa	Known RBP	4.03	□□□□□ -1.76
ECHDC1-223	ENST00000534442	TYSND1	Q2T9J0	566 aa		4.03	□□□□□ -1.76
ECHDC1-223	ENST00000534442	ZNF260	Q3ZCT1	412 aa		4.03	□□□□□ -1.76
ECHDC1-223	ENST00000534442	LBH	Q53QV2	105 aa	Predicted RBP	4.03	□□□□□ -1.76
ECHDC1-223	ENST00000534442	SYT14P1	Q58G82	188 aa		4.03	□□□□□ -1.76
ECHDC1-223	ENST00000534442	MDH1B	Q5I0G3	518 aa		4.03	□□□□□ -1.76
ECHDC1-223	ENST00000534442	NKAIN2	Q5VXU1	208 aa		4.03	□□□□□ -1.76
ECHDC1-223	ENST00000534442	FAM171B	Q6P995	826 aa		4.03	□□□□□ -1.76
ECHDC1-223	ENST00000534442	MOXD1	Q6UVY6	613 aa		4.03	□□□□□ -1.76
ECHDC1-223	ENST00000534442	C11orf57	Q6ZUT1	292 aa	Predicted RBP	4.03	□□□□□ -1.76
ECHDC1-223	ENST00000534442	PLEKHM3	Q6ZWE6	761 aa		4.03	□□□□□ -1.76

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