RNA–Protein interactions for RNA: ENST00000534307.1

SF3B2-215, Transcript of splicing factor 3b subunit 2, humanhuman

TSL 3

Gene SF3B2, Length 625 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B2-215ENST00000534307 PRR22Q8IZ63 422 aa12.89□□□□□ -0.35
SF3B2-215ENST00000534307 C16orf78Q8WTQ4 265 aa12.89□□□□□ -0.35
SF3B2-215ENST00000534307 DIO2Q92813 273 aa12.89□□□□□ -0.35
SF3B2-215ENST00000534307 SDCCAG3Q96C92 435 aa12.89□□□□□ -0.35
SF3B2-215ENST00000534307 TREX2Q9BQ50 279 aaPredicted RBP12.89□□□□□ -0.35
SF3B2-215ENST00000534307 DOHHQ9BU89 302 aa12.89□□□□□ -0.35
SF3B2-215ENST00000534307 EBPLQ9BY08 206 aa12.89□□□□□ -0.35
SF3B2-215ENST00000534307 ANGPTL4Q9BY76 406 aa12.89□□□□□ -0.35
SF3B2-215ENST00000534307 TRIM8Q9BZR9 551 aa12.89□□□□□ -0.35
SF3B2-215ENST00000534307 UBQLN3Q9H347 655 aa12.89□□□□□ -0.35
SF3B2-215ENST00000534307 MKS1Q9NXB0 559 aa12.89□□□□□ -0.35
SF3B2-215ENST00000534307 EHD3Q9NZN3 535 aa12.89□□□□□ -0.35
SF3B2-215ENST00000534307 TNFRSF10DQ9UBN6 386 aa12.89□□□□□ -0.35
SF3B2-215ENST00000534307 CFL2Q9Y281 166 aa12.89□□□□□ -0.35
SF3B2-215ENST00000534307 PLLPQ9Y342 182 aa12.89□□□□□ -0.35
SF3B2-215ENST00000534307 CCL27Q9Y4X3 112 aa12.89□□□□□ -0.35
SF3B2-215ENST00000534307 FAM215AQ9Y5M1 114 aa12.89□□□□□ -0.35
SF3B2-215ENST00000534307 ZNF780BQ9Y6R6 833 aa12.89□□□□□ -0.35
SF3B2-215ENST00000534307 GNG14A0A1W2PPG7 69 aa12.88□□□□□ -0.35
SF3B2-215ENST00000534307 COPEO14579 308 aa12.88□□□□□ -0.35
SF3B2-215ENST00000534307 TP53I11O14683 189 aa12.88□□□□□ -0.35
SF3B2-215ENST00000534307 ACOX3O15254 700 aa12.88□□□□□ -0.35
SF3B2-215ENST00000534307 PPM1BO75688 479 aa12.88□□□□□ -0.35
SF3B2-215ENST00000534307 SNX4O95219 450 aa12.88□□□□□ -0.35
SF3B2-215ENST00000534307 NUDT17P0C025 328 aa12.88□□□□□ -0.35
SF3B2-215ENST00000534307 CPA3P15088 417 aa12.88□□□□□ -0.35
SF3B2-215ENST00000534307 NAGAP17050 411 aa12.88□□□□□ -0.35
SF3B2-215ENST00000534307 ACVR2AP27037 513 aa12.88□□□□□ -0.35
SF3B2-215ENST00000534307 CASP3P42574 277 aa12.88□□□□□ -0.35
SF3B2-215ENST00000534307 MAN2A2P49641 1150 aa12.88□□□□□ -0.35
SF3B2-215ENST00000534307 NRG3P56975 720 aa12.88□□□□□ -0.35
SF3B2-215ENST00000534307 VSNL1P62760 191 aa12.88□□□□□ -0.35
SF3B2-215ENST00000534307 MRPS35P82673 323 aaKnown RBP12.88□□□□□ -0.35
SF3B2-215ENST00000534307 HEPACAMQ14CZ8 416 aa12.88□□□□□ -0.35
SF3B2-215ENST00000534307 NNATQ16517 81 aa12.88□□□□□ -0.35
SF3B2-215ENST00000534307 PRSS53Q2L4Q9 553 aa12.88□□□□□ -0.35
SF3B2-215ENST00000534307 LIPMQ5VYY2 423 aa12.88□□□□□ -0.35
SF3B2-215ENST00000534307 TMEM81Q6P7N7 255 aa12.88□□□□□ -0.35
SF3B2-215ENST00000534307 GDF7Q7Z4P5 450 aa12.88□□□□□ -0.35
SF3B2-215ENST00000534307 CCDC116Q8IYX3 515 aa12.88□□□□□ -0.35
SF3B2-215ENST00000534307 C4orf33Q8N1A6 199 aa12.88□□□□□ -0.35
SF3B2-215ENST00000534307 OR52R1Q8NGF1 315 aa12.88□□□□□ -0.35
SF3B2-215ENST00000534307 OR5M9Q8NGP3 310 aa12.88□□□□□ -0.35
SF3B2-215ENST00000534307 OR2W6PQ8NHA6 318 aa12.88□□□□□ -0.35
SF3B2-215ENST00000534307 HGDQ93099 445 aa12.88□□□□□ -0.35
SF3B2-215ENST00000534307 EXOSC8Q96B26 276 aaKnown RBP12.88□□□□□ -0.35
SF3B2-215ENST00000534307 ERP27Q96DN0 273 aa12.88□□□□□ -0.35
SF3B2-215ENST00000534307 LCORQ96JN0 433 aaPredicted RBP12.88□□□□□ -0.35
SF3B2-215ENST00000534307 ZNF597Q96LX8 424 aa12.88□□□□□ -0.35
SF3B2-215ENST00000534307 RILPQ96NA2 401 aa12.88□□□□□ -0.35
SF3B2-215ENST00000534307 COQ3Q9NZJ6 369 aa12.88□□□□□ -0.35
SF3B2-215ENST00000534307 FREM3P0C091 2139 aa12.88□□□□□ -0.35
SF3B2-215ENST00000534307 VPS13CQ709C8 3753 aa12.87□□□□□ -0.35
SF3B2-215ENST00000534307 TRGV5A0A0B4J1U4 118 aa12.87□□□□□ -0.35
SF3B2-215ENST00000534307 FIGNL2A6NMB9 653 aa12.87□□□□□ -0.35
SF3B2-215ENST00000534307 NPIPB8E9PQR5 432 aa12.87□□□□□ -0.35
SF3B2-215ENST00000534307 TO15178 435 aa12.87□□□□□ -0.35
SF3B2-215ENST00000534307 RSL1D1O76021 490 aaKnown RBP12.87□□□□□ -0.35
SF3B2-215ENST00000534307 ANXA4P09525 319 aaPredicted RBP12.87□□□□□ -0.35
SF3B2-215ENST00000534307 COX6B1P14854 86 aa12.87□□□□□ -0.35
SF3B2-215ENST00000534307 IGFBP2P18065 325 aa12.87□□□□□ -0.35
SF3B2-215ENST00000534307 DDCP20711 480 aa12.87□□□□□ -0.35
SF3B2-215ENST00000534307 DRD5P21918 477 aa12.87□□□□□ -0.35
SF3B2-215ENST00000534307 CHRNB4P30926 498 aa12.87□□□□□ -0.35
SF3B2-215ENST00000534307 PPICP45877 212 aa12.87□□□□□ -0.35
SF3B2-215ENST00000534307 NUP107P57740 925 aa12.87□□□□□ -0.35
SF3B2-215ENST00000534307 TFF3Q07654 80 aa12.87□□□□□ -0.35
SF3B2-215ENST00000534307 ZNF763Q0D2J5 394 aa12.87□□□□□ -0.35
SF3B2-215ENST00000534307 PMPCAQ10713 525 aa12.87□□□□□ -0.35
SF3B2-215ENST00000534307 PCLAFQ15004 111 aa12.87□□□□□ -0.35
SF3B2-215ENST00000534307 TESK1Q15569 626 aa12.87□□□□□ -0.35
SF3B2-215ENST00000534307 CFAP157Q5JU67 520 aa12.87□□□□□ -0.35
SF3B2-215ENST00000534307 DESI1Q6ICB0 168 aa12.87□□□□□ -0.35
SF3B2-215ENST00000534307 SAMD14Q8IZD0 417 aaPredicted RBP12.87□□□□□ -0.35
SF3B2-215ENST00000534307 ZNF295-AS1Q8N0V1 137 aa12.87□□□□□ -0.35
SF3B2-215ENST00000534307 OR9A2Q8NGT5 310 aa12.87□□□□□ -0.35
SF3B2-215ENST00000534307 LILRB4Q8NHJ6 448 aa12.87□□□□□ -0.35
SF3B2-215ENST00000534307 NEIL3Q8TAT5 605 aa12.87□□□□□ -0.35
SF3B2-215ENST00000534307 FAM76AQ8TAV0 307 aa12.87□□□□□ -0.35
SF3B2-215ENST00000534307 CA5BP1Q8WTZ4 195 aa12.87□□□□□ -0.35
SF3B2-215ENST00000534307 RND1Q92730 232 aa12.87□□□□□ -0.35
SF3B2-215ENST00000534307 SARAFQ96BY9 339 aa12.87□□□□□ -0.35
SF3B2-215ENST00000534307 OMA1Q96E52 524 aa12.87□□□□□ -0.35
SF3B2-215ENST00000534307 HSPBAP1Q96EW2 488 aa12.87□□□□□ -0.35
SF3B2-215ENST00000534307 TMEM41AQ96HV5 264 aa12.87□□□□□ -0.35
SF3B2-215ENST00000534307 BTBD9Q96Q07 612 aa12.87□□□□□ -0.35
SF3B2-215ENST00000534307 TTYH2Q9BSA4 534 aa12.87□□□□□ -0.35
SF3B2-215ENST00000534307 SHCBP1LQ9BZQ2 653 aa12.87□□□□□ -0.35
SF3B2-215ENST00000534307 ENKD1Q9H0I2 346 aa12.87□□□□□ -0.35
SF3B2-215ENST00000534307 SLC6A15Q9H2J7 730 aa12.87□□□□□ -0.35
SF3B2-215ENST00000534307 ANKRA2Q9H9E1 313 aa12.87□□□□□ -0.35
SF3B2-215ENST00000534307 SLC35C2Q9NQQ7 365 aa12.87□□□□□ -0.35
SF3B2-215ENST00000534307 TAS2R7Q9NYW3 318 aa12.87□□□□□ -0.35
SF3B2-215ENST00000534307 B4GALT7Q9UBV7 327 aa12.87□□□□□ -0.35
SF3B2-215ENST00000534307 PRODH2Q9UF12 536 aa12.87□□□□□ -0.35
SF3B2-215ENST00000534307 BCAP29Q9UHQ4 241 aa12.87□□□□□ -0.35
SF3B2-215ENST00000534307 ITGB1BP2Q9UKP3 347 aa12.87□□□□□ -0.35
SF3B2-215ENST00000534307 EXO1Q9UQ84 846 aaKnown RBP12.87□□□□□ -0.35
SF3B2-215ENST00000534307 RNF6Q9Y252 685 aa12.87□□□□□ -0.35
SF3B2-215ENST00000534307 GPR55Q9Y2T6 319 aaPredicted RBP12.87□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms