RNA–Protein interactions for RNA: ENST00000533946.5

SSBP3-215, Transcript of single stranded DNA binding protein 3, humanhuman

TSL 3

Gene SSBP3, Length 431 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP3-215ENST00000533946 MCM8Q9UJA3 840 aa8.82□□□□□ -1
SSBP3-215ENST00000533946 ZNF469Q96JG9 3925 aaPredicted RBP8.82□□□□□ -1
SSBP3-215ENST00000533946 A0A1B0GVC2 190 aa8.81□□□□□ -1
SSBP3-215ENST00000533946 GNG14A0A1W2PPG7 69 aa8.81□□□□□ -1
SSBP3-215ENST00000533946 C1orf226A1L170 272 aa8.81□□□□□ -1
SSBP3-215ENST00000533946 COPEO14579 308 aa8.81□□□□□ -1
SSBP3-215ENST00000533946 PRRG2O14669 202 aa8.81□□□□□ -1
SSBP3-215ENST00000533946 GLRA3O75311 464 aa8.81□□□□□ -1
SSBP3-215ENST00000533946 CLDN14O95500 239 aa8.81□□□□□ -1
SSBP3-215ENST00000533946 KRT6AP02538 564 aa8.81□□□□□ -1
SSBP3-215ENST00000533946 KRT6BP04259 564 aa8.81□□□□□ -1
SSBP3-215ENST00000533946 ATP1B1P05026 303 aa8.81□□□□□ -1
SSBP3-215ENST00000533946 JUNP05412 331 aaKnown RBP8.81□□□□□ -1
SSBP3-215ENST00000533946 GSTA1P08263 222 aa8.81□□□□□ -1
SSBP3-215ENST00000533946 ANXA4P09525 319 aaPredicted RBP8.81□□□□□ -1
SSBP3-215ENST00000533946 LINC00032P0C843 101 aa8.81□□□□□ -1
SSBP3-215ENST00000533946 CSNK2A2P19784 350 aaPredicted RBP8.81□□□□□ -1
SSBP3-215ENST00000533946 GALNSP34059 522 aa8.81□□□□□ -1
SSBP3-215ENST00000533946 DEKP35659 375 aaKnown RBP8.81□□□□□ -1
SSBP3-215ENST00000533946 KRT6CP48668 564 aa8.81□□□□□ -1
SSBP3-215ENST00000533946 AGFG1P52594 562 aaKnown RBP8.81□□□□□ -1
SSBP3-215ENST00000533946 DLX5P56178 289 aa8.81□□□□□ -1
SSBP3-215ENST00000533946 CSTF3Q12996 717 aaKnown RBP8.81□□□□□ -1
SSBP3-215ENST00000533946 SLC10A1Q14973 349 aa8.81□□□□□ -1
SSBP3-215ENST00000533946 HYAL4Q2M3T9 481 aa8.81□□□□□ -1
SSBP3-215ENST00000533946 UGT3A2Q3SY77 523 aa8.81□□□□□ -1
SSBP3-215ENST00000533946 SPDYAQ5MJ70 313 aa8.81□□□□□ -1
SSBP3-215ENST00000533946 WIPI1Q5MNZ9 446 aaPredicted RBP8.81□□□□□ -1
SSBP3-215ENST00000533946 LGSNQ5TDP6 509 aa8.81□□□□□ -1
SSBP3-215ENST00000533946 RPTNQ6XPR3 784 aa8.81□□□□□ -1
SSBP3-215ENST00000533946 PAGE2Q7Z2X7 111 aa8.81□□□□□ -1
SSBP3-215ENST00000533946 ZNF551Q7Z340 670 aaPredicted RBP8.81□□□□□ -1
SSBP3-215ENST00000533946 YRDCQ86U90 279 aaKnown RBP8.81□□□□□ -1
SSBP3-215ENST00000533946 TRABD2AQ86V40 505 aa8.81□□□□□ -1
SSBP3-215ENST00000533946 TICAM1Q8IUC6 712 aa8.81□□□□□ -1
SSBP3-215ENST00000533946 GPALPP1Q8IXQ4 340 aa8.81□□□□□ -1
SSBP3-215ENST00000533946 FAM109AQ8N4B1 249 aa8.81□□□□□ -1
SSBP3-215ENST00000533946 WDSUB1Q8N9V3 476 aa8.81□□□□□ -1
SSBP3-215ENST00000533946 RDH11Q8TC12 318 aa8.81□□□□□ -1
SSBP3-215ENST00000533946 SLC22A8Q8TCC7 542 aa8.81□□□□□ -1
SSBP3-215ENST00000533946 NRGNQ92686 78 aa8.81□□□□□ -1
SSBP3-215ENST00000533946 TMBIM1Q969X1 311 aa8.81□□□□□ -1
SSBP3-215ENST00000533946 OMA1Q96E52 524 aa8.81□□□□□ -1
SSBP3-215ENST00000533946 OTUB1Q96FW1 271 aaPredicted RBP8.81□□□□□ -1
SSBP3-215ENST00000533946 PKNOX2Q96KN3 472 aa8.81□□□□□ -1
SSBP3-215ENST00000533946 SGCZQ96LD1 299 aa8.81□□□□□ -1
SSBP3-215ENST00000533946 FAM111AQ96PZ2 611 aa8.81□□□□□ -1
SSBP3-215ENST00000533946 DOHHQ9BU89 302 aa8.81□□□□□ -1
SSBP3-215ENST00000533946 ANGPTL4Q9BY76 406 aa8.81□□□□□ -1
SSBP3-215ENST00000533946 UBQLN3Q9H347 655 aa8.81□□□□□ -1
SSBP3-215ENST00000533946 GLIPR2Q9H4G4 154 aa8.81□□□□□ -1
SSBP3-215ENST00000533946 WDR41Q9HAD4 459 aa8.81□□□□□ -1
SSBP3-215ENST00000533946 ZFP64Q9NPA5 681 aa8.81□□□□□ -1
SSBP3-215ENST00000533946 AHSPQ9NZD4 102 aa8.81□□□□□ -1
SSBP3-215ENST00000533946 SUCOQ9UBS9 1254 aaKnown RBP8.81□□□□□ -1
SSBP3-215ENST00000533946 TRGV5A0A0B4J1U4 118 aa8.8□□□□□ -1
SSBP3-215ENST00000533946 GXYLT2A0PJZ3 443 aa8.8□□□□□ -1
SSBP3-215ENST00000533946 OR6C76A6NM76 312 aa8.8□□□□□ -1
SSBP3-215ENST00000533946 MYO1GB0I1T2 1018 aa8.8□□□□□ -1
SSBP3-215ENST00000533946 AKAP10O43572 662 aa8.8□□□□□ -1
SSBP3-215ENST00000533946 ITM2AO43736 263 aa8.8□□□□□ -1
SSBP3-215ENST00000533946 ICOSLGO75144 302 aa8.8□□□□□ -1
SSBP3-215ENST00000533946 LYPLA1O75608 230 aaPredicted RBP8.8□□□□□ -1
SSBP3-215ENST00000533946 PPM1BO75688 479 aa8.8□□□□□ -1
SSBP3-215ENST00000533946 IGKV1D-16P01601 117 aa8.8□□□□□ -1
SSBP3-215ENST00000533946 C1QCP02747 245 aa8.8□□□□□ -1
SSBP3-215ENST00000533946 MC3RP41968 323 aa8.8□□□□□ -1
SSBP3-215ENST00000533946 STARP49675 285 aa8.8□□□□□ -1
SSBP3-215ENST00000533946 RNF144AP50876 292 aaPredicted RBP8.8□□□□□ -1
SSBP3-215ENST00000533946 PKNOX1P55347 436 aa8.8□□□□□ -1
SSBP3-215ENST00000533946 DNAJB13P59910 316 aa8.8□□□□□ -1
SSBP3-215ENST00000533946 ACSM2AQ08AH3 577 aa8.8□□□□□ -1
SSBP3-215ENST00000533946 RPS6KA2Q15349 733 aa8.8□□□□□ -1
SSBP3-215ENST00000533946 RFTN2Q52LD8 501 aaPredicted RBP8.8□□□□□ -1
SSBP3-215ENST00000533946 ACSM2BQ68CK6 577 aa8.8□□□□□ -1
SSBP3-215ENST00000533946 NOXRED1Q6NXP6 359 aa8.8□□□□□ -1
SSBP3-215ENST00000533946 ARHGAP11AQ6P4F7 1023 aa8.8□□□□□ -1
SSBP3-215ENST00000533946 GALNT18Q6P9A2 607 aa8.8□□□□□ -1
SSBP3-215ENST00000533946 POMZP3Q6PJE2 187 aa8.8□□□□□ -1
SSBP3-215ENST00000533946 XKRXQ6PP77 449 aa8.8□□□□□ -1
SSBP3-215ENST00000533946 TMEM107Q6UX40 140 aa8.8□□□□□ -1
SSBP3-215ENST00000533946 GK5Q6ZS86 529 aa8.8□□□□□ -1
SSBP3-215ENST00000533946 TRIM46Q7Z4K8 759 aa8.8□□□□□ -1
SSBP3-215ENST00000533946 ZAR1Q86SH2 424 aa8.8□□□□□ -1
SSBP3-215ENST00000533946 EXOC3L1Q86VI1 746 aa8.8□□□□□ -1
SSBP3-215ENST00000533946 SLC22A16Q86VW1 577 aa8.8□□□□□ -1
SSBP3-215ENST00000533946 SLC22A9Q8IVM8 553 aa8.8□□□□□ -1
SSBP3-215ENST00000533946 CCDC63Q8NA47 563 aa8.8□□□□□ -1
SSBP3-215ENST00000533946 ACBD4Q8NC06 268 aa8.8□□□□□ -1
SSBP3-215ENST00000533946 EFHD2Q96C19 240 aaPredicted RBP8.8□□□□□ -1
SSBP3-215ENST00000533946 VSTM2LQ96N03 204 aa8.8□□□□□ -1
SSBP3-215ENST00000533946 NPAS1Q99742 590 aa8.8□□□□□ -1
SSBP3-215ENST00000533946 TTYH2Q9BSA4 534 aa8.8□□□□□ -1
SSBP3-215ENST00000533946 C20orf27Q9GZN8 174 aa8.8□□□□□ -1
SSBP3-215ENST00000533946 FOLH1BQ9HBA9 442 aa8.8□□□□□ -1
SSBP3-215ENST00000533946 SERHLQ9NQF3 203 aa8.8□□□□□ -1
SSBP3-215ENST00000533946 PFDN4Q9NQP4 134 aa8.8□□□□□ -1
SSBP3-215ENST00000533946 SLC35C2Q9NQQ7 365 aa8.8□□□□□ -1
SSBP3-215ENST00000533946 FBXO34Q9NWN3 711 aa8.8□□□□□ -1
SSBP3-215ENST00000533946 FBXL2Q9UKC9 423 aa8.8□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 23.2 ms