RNA–Protein interactions for RNA: ENST00000533897.1

CTSC-208, Transcript of cathepsin C, human

TSL 2

Gene CTSC, Length 4,344 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CTSC-208	ENST00000533897	SLC22A4	Q9H015	551 aa		4.15	□□□□□ -1.74
CTSC-208	ENST00000533897	NEUROD4	Q9HD90	331 aa		4.15	□□□□□ -1.74
CTSC-208	ENST00000533897	RBFOX1	Q9NWB1	397 aa	Known RBP	4.15	□□□□□ -1.74
CTSC-208	ENST00000533897	CARD8	Q9Y2G2	431 aa		4.15	□□□□□ -1.74
CTSC-208	ENST00000533897	NPTN	Q9Y639	398 aa		4.15	□□□□□ -1.74
CTSC-208	ENST00000533897	KCNE3	Q9Y6H6	103 aa		4.15	□□□□□ -1.74
CTSC-208	ENST00000533897	ANKRD61	A6NGH8	418 aa		4.15	□□□□□ -1.74
CTSC-208	ENST00000533897	SYT5	O00445	386 aa		4.15	□□□□□ -1.74
CTSC-208	ENST00000533897	FOXS1	O43638	330 aa		4.15	□□□□□ -1.74
CTSC-208	ENST00000533897	LANCL1	O43813	399 aa		4.15	□□□□□ -1.74
CTSC-208	ENST00000533897	LCMT2	O60294	686 aa	Known RBP	4.15	□□□□□ -1.74
CTSC-208	ENST00000533897	UBXN7	O94888	489 aa		4.15	□□□□□ -1.74
CTSC-208	ENST00000533897	SOX14	O95416	240 aa		4.15	□□□□□ -1.74
CTSC-208	ENST00000533897	IFNA14	P01570	189 aa		4.15	□□□□□ -1.74
CTSC-208	ENST00000533897	INHA	P05111	366 aa		4.15	□□□□□ -1.74
CTSC-208	ENST00000533897	EPHX1	P07099	455 aa		4.15	□□□□□ -1.74
CTSC-208	ENST00000533897	CEBPB	P17676	345 aa		4.15	□□□□□ -1.74
CTSC-208	ENST00000533897	ITGB8	P26012	769 aa		4.15	□□□□□ -1.74
CTSC-208	ENST00000533897	PIN1	Q13526	163 aa	Predicted RBP	4.15	□□□□□ -1.74
CTSC-208	ENST00000533897	GPR19	Q15760	415 aa		4.15	□□□□□ -1.74
CTSC-208	ENST00000533897	MLF2	Q15773	248 aa	Predicted RBP	4.15	□□□□□ -1.74
CTSC-208	ENST00000533897	NDUFA9	Q16795	377 aa		4.15	□□□□□ -1.74
CTSC-208	ENST00000533897	OR2G6	Q5TZ20	316 aa		4.15	□□□□□ -1.74
CTSC-208	ENST00000533897	TMEM220	Q6QAJ8	160 aa		4.15	□□□□□ -1.74
CTSC-208	ENST00000533897	WASH2P	Q6VEQ5	465 aa		4.15	□□□□□ -1.74
CTSC-208	ENST00000533897	RASSF6	Q6ZTQ3	369 aa		4.15	□□□□□ -1.74
CTSC-208	ENST00000533897	KRT73	Q86Y46	540 aa		4.15	□□□□□ -1.74
CTSC-208	ENST00000533897	RAB43	Q86YS6	212 aa		4.15	□□□□□ -1.74
CTSC-208	ENST00000533897	TCEANC	Q8N8B7	351 aa		4.15	□□□□□ -1.74
CTSC-208	ENST00000533897	FLVCR1-AS1	Q8TAF5	88 aa		4.15	□□□□□ -1.74
CTSC-208	ENST00000533897	SFXN5	Q8TD22	340 aa		4.15	□□□□□ -1.74
CTSC-208	ENST00000533897	UTP15	Q8TED0	518 aa	Known RBP	4.15	□□□□□ -1.74
CTSC-208	ENST00000533897	CAPSL	Q8WWF8	208 aa		4.15	□□□□□ -1.74
CTSC-208	ENST00000533897	BHMT	Q93088	406 aa		4.15	□□□□□ -1.74
CTSC-208	ENST00000533897	ARRDC3	Q96B67	414 aa		4.15	□□□□□ -1.74
CTSC-208	ENST00000533897	RSPRY1	Q96DX4	576 aa		4.15	□□□□□ -1.74
CTSC-208	ENST00000533897	TCEAL4	Q96EI5	215 aa		4.15	□□□□□ -1.74
CTSC-208	ENST00000533897	SCMH1	Q96GD3	660 aa		4.15	□□□□□ -1.74
CTSC-208	ENST00000533897	SLC38A1	Q9H2H9	487 aa		4.15	□□□□□ -1.74
CTSC-208	ENST00000533897	GHITM	Q9H3K2	345 aa		4.15	□□□□□ -1.74
CTSC-208	ENST00000533897	MTG2	Q9H4K7	406 aa		4.15	□□□□□ -1.74
CTSC-208	ENST00000533897	SPHK2	Q9NRA0	654 aa		4.15	□□□□□ -1.74
CTSC-208	ENST00000533897	CUEDC1	Q9NWM3	386 aa	Predicted RBP	4.15	□□□□□ -1.74
CTSC-208	ENST00000533897	HCFC1R1	Q9NWW0	138 aa		4.15	□□□□□ -1.74
CTSC-208	ENST00000533897	ASB6	Q9NWX5	421 aa		4.15	□□□□□ -1.74
CTSC-208	ENST00000533897	POLH	Q9Y253	713 aa		4.15	□□□□□ -1.74
CTSC-208	ENST00000533897	TRAV19	A0A0A6YYK7	116 aa		4.15	□□□□□ -1.75
CTSC-208	ENST00000533897		A0A1W2PRU2	124 aa		4.15	□□□□□ -1.75
CTSC-208	ENST00000533897		A0A1W2PS29	197 aa		4.15	□□□□□ -1.75
CTSC-208	ENST00000533897	PDZK1P1	A8MUH7	402 aa		4.15	□□□□□ -1.75
CTSC-208	ENST00000533897	GTPBP1	O00178	669 aa	Known RBP	4.15	□□□□□ -1.75
CTSC-208	ENST00000533897	CASC3	O15234	703 aa	Known RBP	4.15	□□□□□ -1.75
CTSC-208	ENST00000533897	SHOX	O15266	292 aa		4.15	□□□□□ -1.75
CTSC-208	ENST00000533897	PI15	O43692	258 aa		4.15	□□□□□ -1.75
CTSC-208	ENST00000533897	IDH3B	O43837	385 aa		4.15	□□□□□ -1.75
CTSC-208	ENST00000533897	PEX14	O75381	377 aa		4.15	□□□□□ -1.75
CTSC-208	ENST00000533897	SLC43A1	O75387	559 aa		4.15	□□□□□ -1.75
CTSC-208	ENST00000533897	POU2F2	P09086	479 aa		4.15	□□□□□ -1.75
CTSC-208	ENST00000533897	CHRNB1	P11230	501 aa		4.15	□□□□□ -1.75
CTSC-208	ENST00000533897	TYR	P14679	529 aa		4.15	□□□□□ -1.75
CTSC-208	ENST00000533897	PEBP1	P30086	187 aa	Known RBP	4.15	□□□□□ -1.75
CTSC-208	ENST00000533897	RFX3	P48380	749 aa		4.15	□□□□□ -1.75
CTSC-208	ENST00000533897	ZNF136	P52737	540 aa		4.15	□□□□□ -1.75
CTSC-208	ENST00000533897	P2RX3	P56373	397 aa		4.15	□□□□□ -1.75
CTSC-208	ENST00000533897	UBE3A	Q05086	875 aa		4.15	□□□□□ -1.75
CTSC-208	ENST00000533897	HNRNPA0	Q13151	305 aa	Known RBP	4.15	□□□□□ -1.75
CTSC-208	ENST00000533897	RPA4	Q13156	261 aa		4.15	□□□□□ -1.75
CTSC-208	ENST00000533897	INSL4	Q14641	139 aa		4.15	□□□□□ -1.75
CTSC-208	ENST00000533897	CEP78	Q5JTW2	689 aa		4.15	□□□□□ -1.75
CTSC-208	ENST00000533897	FHL5	Q5TD97	284 aa		4.15	□□□□□ -1.75
CTSC-208	ENST00000533897	PLPP4	Q5VZY2	271 aa		4.15	□□□□□ -1.75
CTSC-208	ENST00000533897	METRNL	Q641Q3	311 aa		4.15	□□□□□ -1.75
CTSC-208	ENST00000533897	C22orf42	Q6IC83	251 aa		4.15	□□□□□ -1.75
CTSC-208	ENST00000533897	SLC30A6	Q6NXT4	461 aa		4.15	□□□□□ -1.75
CTSC-208	ENST00000533897	ADAMTSL4	Q6UY14	1074 aa		4.15	□□□□□ -1.75
CTSC-208	ENST00000533897	GALNT12	Q8IXK2	581 aa		4.15	□□□□□ -1.75
CTSC-208	ENST00000533897	LINC00471	Q8N535	108 aa		4.15	□□□□□ -1.75
CTSC-208	ENST00000533897	TMIE	Q8NEW7	156 aa		4.15	□□□□□ -1.75
CTSC-208	ENST00000533897	OR52N1	Q8NH53	320 aa		4.15	□□□□□ -1.75
CTSC-208	ENST00000533897	SORCS1	Q8WY21	1168 aa		4.15	□□□□□ -1.75
CTSC-208	ENST00000533897	PGLYRP3	Q96LB9	341 aa		4.15	□□□□□ -1.75
CTSC-208	ENST00000533897	ZSWIM3	Q96MP5	696 aa		4.15	□□□□□ -1.75
CTSC-208	ENST00000533897	COQ7	Q99807	217 aa		4.15	□□□□□ -1.75
CTSC-208	ENST00000533897	LINC00597	Q9H2U6	94 aa		4.15	□□□□□ -1.75
CTSC-208	ENST00000533897	EGLN3	Q9H6Z9	239 aa		4.15	□□□□□ -1.75
CTSC-208	ENST00000533897	PRDM7	Q9NQW5	492 aa		4.15	□□□□□ -1.75
CTSC-208	ENST00000533897	ZNF275	Q9NSD4	429 aa	Predicted RBP	4.15	□□□□□ -1.75
CTSC-208	ENST00000533897	SNTG1	Q9NSN8	517 aa		4.15	□□□□□ -1.75
CTSC-208	ENST00000533897	SEMA4G	Q9NTN9	838 aa		4.15	□□□□□ -1.75
CTSC-208	ENST00000533897	GIMAP4	Q9NUV9	329 aa		4.15	□□□□□ -1.75
CTSC-208	ENST00000533897	KCMF1	Q9P0J7	381 aa		4.15	□□□□□ -1.75
CTSC-208	ENST00000533897	TBC1D14	Q9P2M4	693 aa		4.15	□□□□□ -1.75
CTSC-208	ENST00000533897	NUFIP1	Q9UHK0	495 aa	Known RBP	4.15	□□□□□ -1.75
CTSC-208	ENST00000533897	ELF5	Q9UKW6	265 aa	Predicted RBP	4.15	□□□□□ -1.75
CTSC-208	ENST00000533897	ALG5	Q9Y673	324 aa		4.15	□□□□□ -1.75
CTSC-208	ENST00000533897	LRIT2	A6NDA9	550 aa		4.14	□□□□□ -1.75
CTSC-208	ENST00000533897		M0R3H8	397 aa		4.14	□□□□□ -1.75
CTSC-208	ENST00000533897	BHLHE40	O14503	412 aa		4.14	□□□□□ -1.75
CTSC-208	ENST00000533897	CDRT1	O95170	752 aa		4.14	□□□□□ -1.75
CTSC-208	ENST00000533897	FH	P07954	510 aa		4.14	□□□□□ -1.75

Retrieved 100 of 20,778 RNA–protein pairs in 27 ms