RNA–Protein interactions for RNA: ENST00000533820.5

CAPN1-226, Transcript of calpain 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CAPN1, Length 3,083 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1-226ENST00000533820 ERAL1O75616 437 aaKnown RBP18.26■□□□□ 0.51
CAPN1-226ENST00000533820 NCR1O76036 304 aa18.26■□□□□ 0.51
CAPN1-226ENST00000533820 SRPRAP08240 638 aaKnown RBP18.26■□□□□ 0.51
CAPN1-226ENST00000533820 SNRPGP62308 76 aaKnown RBP18.26■□□□□ 0.51
CAPN1-226ENST00000533820 ELOAQ14241 798 aaKnown RBP18.26■□□□□ 0.51
CAPN1-226ENST00000533820 TCEAL5Q5H9L2 206 aa18.26■□□□□ 0.51
CAPN1-226ENST00000533820 PLEKHM3Q6ZWE6 761 aa18.26■□□□□ 0.51
CAPN1-226ENST00000533820 SMPDL3AQ92484 453 aa18.26■□□□□ 0.51
CAPN1-226ENST00000533820 OTULINQ96BN8 352 aa18.26■□□□□ 0.51
CAPN1-226ENST00000533820 ZDHHC5Q9C0B5 715 aa18.26■□□□□ 0.51
CAPN1-226ENST00000533820 OR51I1Q9H343 314 aa18.26■□□□□ 0.51
CAPN1-226ENST00000533820 NDUFB11Q9NX14 153 aa18.26■□□□□ 0.51
CAPN1-226ENST00000533820 CCDC182A6NF36 153 aa18.25■□□□□ 0.51
CAPN1-226ENST00000533820 WDR5P61964 334 aaKnown RBP18.25■□□□□ 0.51
CAPN1-226ENST00000533820 SCN1BQ07699 218 aa18.25■□□□□ 0.51
CAPN1-226ENST00000533820 NCF4Q15080 339 aa18.25■□□□□ 0.51
CAPN1-226ENST00000533820 SAXO2Q658L1 398 aa18.25■□□□□ 0.51
CAPN1-226ENST00000533820 LRRC56Q8IYG6 542 aaPredicted RBP18.25■□□□□ 0.51
CAPN1-226ENST00000533820 TM9SF4Q92544 642 aa18.25■□□□□ 0.51
CAPN1-226ENST00000533820 KLK6Q92876 244 aa18.25■□□□□ 0.51
CAPN1-226ENST00000533820 MARC2Q969Z3 335 aa18.25■□□□□ 0.51
CAPN1-226ENST00000533820 FAAHO00519 579 aa18.25■□□□□ 0.51
CAPN1-226ENST00000533820 FGF18O76093 207 aa18.25■□□□□ 0.51
CAPN1-226ENST00000533820 CXCL10P02778 98 aa18.25■□□□□ 0.51
CAPN1-226ENST00000533820 CSF3P09919 207 aa18.25■□□□□ 0.51
CAPN1-226ENST00000533820 UBE3AQ05086 875 aa18.25■□□□□ 0.51
CAPN1-226ENST00000533820 KHDRBS2Q5VWX1 349 aaKnown RBP18.25■□□□□ 0.51
CAPN1-226ENST00000533820 C12orf73Q69YU5 71 aa18.25■□□□□ 0.51
CAPN1-226ENST00000533820 C17orf64Q86WR6 236 aa18.25■□□□□ 0.51
CAPN1-226ENST00000533820 OR6T1Q8NGN1 323 aa18.25■□□□□ 0.51
CAPN1-226ENST00000533820 DTD2Q96FN9 168 aa18.25■□□□□ 0.51
CAPN1-226ENST00000533820 HCN2Q9UL51 889 aa18.25■□□□□ 0.51
CAPN1-226ENST00000533820 C8orf89P0DMQ9 161 aa18.24■□□□□ 0.51
CAPN1-226ENST00000533820 ACRP10323 421 aa18.24■□□□□ 0.51
CAPN1-226ENST00000533820 PIPP12273 146 aaPredicted RBP18.24■□□□□ 0.51
CAPN1-226ENST00000533820 APEX1P27695 318 aaKnown RBP18.24■□□□□ 0.51
CAPN1-226ENST00000533820 SOX18P35713 384 aa18.24■□□□□ 0.51
CAPN1-226ENST00000533820 KCNJ5P48544 419 aa18.24■□□□□ 0.51
CAPN1-226ENST00000533820 KHDRBS1Q07666 443 aaKnown RBP eCLIP18.24■□□□□ 0.51
CAPN1-226ENST00000533820 HYAL2Q12891 473 aa18.24■□□□□ 0.51
CAPN1-226ENST00000533820 CCDC85BQ15834 202 aaPredicted RBP18.24■□□□□ 0.51
CAPN1-226ENST00000533820 ESCO2Q56NI9 601 aa18.24■□□□□ 0.51
CAPN1-226ENST00000533820 DGLUCYQ7Z3D6 616 aa18.24■□□□□ 0.51
CAPN1-226ENST00000533820 CDH24Q86UP0 819 aa18.24■□□□□ 0.51
CAPN1-226ENST00000533820 KRT78Q8N1N4 520 aa18.24■□□□□ 0.51
CAPN1-226ENST00000533820 ATP6V1C2Q8NEY4 427 aa18.24■□□□□ 0.51
CAPN1-226ENST00000533820 PROKR2Q8NFJ6 384 aa18.24■□□□□ 0.51
CAPN1-226ENST00000533820 ST8SIA2Q92186 375 aa18.24■□□□□ 0.51
CAPN1-226ENST00000533820 ZNF354BQ96LW1 612 aa18.24■□□□□ 0.51
CAPN1-226ENST00000533820 FZD3Q9NPG1 666 aa18.24■□□□□ 0.51
CAPN1-226ENST00000533820 SIRT3Q9NTG7 399 aaPredicted RBP18.24■□□□□ 0.51
CAPN1-226ENST00000533820 ZCCHC3Q9NUD5 404 aaKnown RBP18.24■□□□□ 0.51
CAPN1-226ENST00000533820 CNIH4Q9P003 139 aa18.24■□□□□ 0.51
CAPN1-226ENST00000533820 A4GNTQ9UNA3 340 aa18.24■□□□□ 0.51
CAPN1-226ENST00000533820 SCAMP1O15126 338 aa18.24■□□□□ 0.51
CAPN1-226ENST00000533820 LATO43561 262 aa18.24■□□□□ 0.51
CAPN1-226ENST00000533820 PI15O43692 258 aa18.24■□□□□ 0.51
CAPN1-226ENST00000533820 OR1F1O43749 312 aa18.24■□□□□ 0.51
CAPN1-226ENST00000533820 LILRB5O75023 590 aa18.24■□□□□ 0.51
CAPN1-226ENST00000533820 EVI2BP34910 448 aa18.24■□□□□ 0.51
CAPN1-226ENST00000533820 GIPRP48546 466 aa18.24■□□□□ 0.51
CAPN1-226ENST00000533820 UNC5DQ6UXZ4 953 aa18.24■□□□□ 0.51
CAPN1-226ENST00000533820 PDZD3Q86UT5 571 aa18.24■□□□□ 0.51
CAPN1-226ENST00000533820 LAPTM4BQ86VI4 370 aa18.24■□□□□ 0.51
CAPN1-226ENST00000533820 OR52P1PQ8NH57 321 aa18.24■□□□□ 0.51
CAPN1-226ENST00000533820 CHAC2Q8WUX2 184 aa18.24■□□□□ 0.51
CAPN1-226ENST00000533820 EQTNQ9NQ60 294 aa18.24■□□□□ 0.51
CAPN1-226ENST00000533820 SLC23A2Q9UGH3 650 aa18.24■□□□□ 0.51
CAPN1-226ENST00000533820 PCDHGB2Q9Y5G2 931 aa18.24■□□□□ 0.51
CAPN1-226ENST00000533820 CLCA3PQ9Y6N3 262 aa18.24■□□□□ 0.51
CAPN1-226ENST00000533820 LEUTXA8MZ59 168 aa18.24■□□□□ 0.51
CAPN1-226ENST00000533820 LINC01387J3KSC0 135 aa18.24■□□□□ 0.51
CAPN1-226ENST00000533820 MYL12AP19105 171 aa18.24■□□□□ 0.51
CAPN1-226ENST00000533820 ALDH6A1Q02252 535 aaKnown RBP18.24■□□□□ 0.51
CAPN1-226ENST00000533820 GPR19Q15760 415 aa18.24■□□□□ 0.51
CAPN1-226ENST00000533820 B3GLCTQ6Y288 498 aa18.24■□□□□ 0.51
CAPN1-226ENST00000533820 OR5P2Q8WZ92 322 aa18.24■□□□□ 0.51
CAPN1-226ENST00000533820 TFGQ92734 400 aaPredicted RBP18.24■□□□□ 0.51
CAPN1-226ENST00000533820 NUS1Q96E22 293 aa18.24■□□□□ 0.51
CAPN1-226ENST00000533820 ZNF582Q96NG8 517 aaPredicted RBP18.24■□□□□ 0.51
CAPN1-226ENST00000533820 ZNF607Q96SK3 696 aa18.24■□□□□ 0.51
CAPN1-226ENST00000533820 TBC1D17Q9HA65 648 aa18.24■□□□□ 0.51
CAPN1-226ENST00000533820 ACOXLQ9NUZ1 547 aa18.24■□□□□ 0.51
CAPN1-226ENST00000533820 PLEKHB1Q9UF11 243 aaPredicted RBP18.24■□□□□ 0.51
CAPN1-226ENST00000533820 NUP50Q9UKX7 468 aa18.24■□□□□ 0.51
CAPN1-226ENST00000533820 TRAPPC4Q9Y296 219 aa18.24■□□□□ 0.51
CAPN1-226ENST00000533820 HEATR5BQ9P2D3 2071 aa18.23■□□□□ 0.51
CAPN1-226ENST00000533820 RAB25P57735 213 aa18.23■□□□□ 0.51
CAPN1-226ENST00000533820 PCDH1Q08174 1060 aa18.23■□□□□ 0.51
CAPN1-226ENST00000533820 MEDAGQ5VYS4 303 aa18.23■□□□□ 0.51
CAPN1-226ENST00000533820 SYCE2Q6PIF2 218 aa18.23■□□□□ 0.51
CAPN1-226ENST00000533820 NOXA1Q86UR1 476 aa18.23■□□□□ 0.51
CAPN1-226ENST00000533820 SFTPA1Q8IWL2 248 aa18.23■□□□□ 0.51
CAPN1-226ENST00000533820 PLA2G15Q8NCC3 412 aa18.23■□□□□ 0.51
CAPN1-226ENST00000533820 NLGN4YQ8NFZ3 816 aaPredicted RBP18.23■□□□□ 0.51
CAPN1-226ENST00000533820 CREB3L4Q8TEY5 395 aa18.23■□□□□ 0.51
CAPN1-226ENST00000533820 SLC25A46Q96AG3 418 aa18.23■□□□□ 0.51
CAPN1-226ENST00000533820 MTERF3Q96E29 417 aa18.23■□□□□ 0.51
CAPN1-226ENST00000533820 SLC35C2Q9NQQ7 365 aa18.23■□□□□ 0.51
CAPN1-226ENST00000533820 CREBZFQ9NS37 354 aa18.23■□□□□ 0.51
Retrieved 100 of 20,778 RNA–protein pairs in 63.3 ms