RNA–Protein interactions for RNA: ENST00000533778.6

CHEK1-215, Transcript of checkpoint kinase 1, humanhuman

TSL 3

Gene CHEK1, Length 561 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHEK1-215ENST00000533778 RTL4Q6ZR62 310 aa18.32■□□□□ 0.52
CHEK1-215ENST00000533778 GOLM1Q8NBJ4 401 aa18.32■□□□□ 0.52
CHEK1-215ENST00000533778 FAM98AQ8NCA5 519 aaKnown RBP18.32■□□□□ 0.52
CHEK1-215ENST00000533778 HSPBAP1Q96EW2 488 aa18.32■□□□□ 0.52
CHEK1-215ENST00000533778 MAGED4Q96JG8 741 aa18.32■□□□□ 0.52
CHEK1-215ENST00000533778 ITPAQ9BY32 194 aa18.32■□□□□ 0.52
CHEK1-215ENST00000533778 CLMPQ9H6B4 373 aa18.32■□□□□ 0.52
CHEK1-215ENST00000533778 NEUROD4Q9HD90 331 aa18.32■□□□□ 0.52
CHEK1-215ENST00000533778 PCDHGB4Q9UN71 923 aa18.32■□□□□ 0.52
CHEK1-215ENST00000533778 KLF13Q9Y2Y9 288 aaPredicted RBP18.32■□□□□ 0.52
CHEK1-215ENST00000533778 ATRXP46100 2492 aa18.31■□□□□ 0.52
CHEK1-215ENST00000533778 FRG2CA6NGY1 282 aa18.31■□□□□ 0.52
CHEK1-215ENST00000533778 TTC36A6NLP5 189 aa18.31■□□□□ 0.52
CHEK1-215ENST00000533778 E9PBE3 544 aa18.31■□□□□ 0.52
CHEK1-215ENST00000533778 RNASET2O00584 256 aaKnown RBP18.31■□□□□ 0.52
CHEK1-215ENST00000533778 SLC22A3O75751 556 aa18.31■□□□□ 0.52
CHEK1-215ENST00000533778 RASAL1O95294 804 aa18.31■□□□□ 0.52
CHEK1-215ENST00000533778 NADKO95544 446 aaPredicted RBP18.31■□□□□ 0.52
CHEK1-215ENST00000533778 VIMP08670 466 aaKnown RBP18.31■□□□□ 0.52
CHEK1-215ENST00000533778 FBXO45P0C2W1 286 aa18.31■□□□□ 0.52
CHEK1-215ENST00000533778 TROVE2P10155 538 aaKnown RBP eCLIP18.31■□□□□ 0.52
CHEK1-215ENST00000533778 NAGAP17050 411 aa18.31■□□□□ 0.52
CHEK1-215ENST00000533778 ST13P50502 369 aaKnown RBP18.31■□□□□ 0.52
CHEK1-215ENST00000533778 STX1BP61266 288 aa18.31■□□□□ 0.52
CHEK1-215ENST00000533778 PRR5P85299 388 aa18.31■□□□□ 0.52
CHEK1-215ENST00000533778 ZNHIT3Q15649 155 aaPredicted RBP18.31■□□□□ 0.52
CHEK1-215ENST00000533778 INPP5JQ15735 1006 aaPredicted RBP18.31■□□□□ 0.52
CHEK1-215ENST00000533778 MAPKAPK3Q16644 382 aa18.31■□□□□ 0.52
CHEK1-215ENST00000533778 COLEC12Q5KU26 742 aa18.31■□□□□ 0.52
CHEK1-215ENST00000533778 SIMC1Q8NDZ2 872 aa18.31■□□□□ 0.52
CHEK1-215ENST00000533778 SPACA9Q96E40 222 aaPredicted RBP18.31■□□□□ 0.52
CHEK1-215ENST00000533778 BTBD9Q96Q07 612 aa18.31■□□□□ 0.52
CHEK1-215ENST00000533778 EPN3Q9H201 632 aa18.31■□□□□ 0.52
CHEK1-215ENST00000533778 ANKRA2Q9H9E1 313 aa18.31■□□□□ 0.52
CHEK1-215ENST00000533778 KLHL1Q9NR64 748 aa18.31■□□□□ 0.52
CHEK1-215ENST00000533778 SDR39U1Q9NRG7 319 aaPredicted RBP18.31■□□□□ 0.52
CHEK1-215ENST00000533778 ZIM2Q9NZV7 527 aa18.31■□□□□ 0.52
CHEK1-215ENST00000533778 GPR55Q9Y2T6 319 aaPredicted RBP18.31■□□□□ 0.52
CHEK1-215ENST00000533778 NPFFR2Q9Y5X5 522 aa18.31■□□□□ 0.52
CHEK1-215ENST00000533778 COPG1Q9Y678 874 aaKnown RBP18.31■□□□□ 0.52
CHEK1-215ENST00000533778 DOCK10Q96BY6 2186 aa18.31■□□□□ 0.52
CHEK1-215ENST00000533778 KLRC4-KLRK1H3BQV0 150 aa18.3■□□□□ 0.52
CHEK1-215ENST00000533778 TO15178 435 aa18.3■□□□□ 0.52
CHEK1-215ENST00000533778 CFLARO15519 480 aa18.3■□□□□ 0.52
CHEK1-215ENST00000533778 EMC8O43402 210 aa18.3■□□□□ 0.52
CHEK1-215ENST00000533778 NME2P1O60361 137 aa18.3■□□□□ 0.52
CHEK1-215ENST00000533778 ERN1O75460 977 aaKnown RBP18.3■□□□□ 0.52
CHEK1-215ENST00000533778 NME2P22392 152 aa18.3■□□□□ 0.52
CHEK1-215ENST00000533778 S100A3P33764 101 aa18.3■□□□□ 0.52
CHEK1-215ENST00000533778 NME5P56597 212 aa18.3■□□□□ 0.52
CHEK1-215ENST00000533778 UFM1P61960 85 aa18.3■□□□□ 0.52
CHEK1-215ENST00000533778 LRRC74AQ0VAA2 488 aa18.3■□□□□ 0.52
CHEK1-215ENST00000533778 ZNF155Q12901 538 aaPredicted RBP18.3■□□□□ 0.52
CHEK1-215ENST00000533778 ZNF791Q3KP31 576 aaPredicted RBP18.3■□□□□ 0.52
CHEK1-215ENST00000533778 TMEM198Q66K66 360 aa18.3■□□□□ 0.52
CHEK1-215ENST00000533778 MIER2Q8N344 545 aa18.3■□□□□ 0.52
CHEK1-215ENST00000533778 CISD2Q8N5K1 135 aaKnown RBP18.3■□□□□ 0.52
CHEK1-215ENST00000533778 PSMA8Q8TAA3 256 aa18.3■□□□□ 0.52
CHEK1-215ENST00000533778 CPT1CQ8TCG5 803 aa18.3■□□□□ 0.52
CHEK1-215ENST00000533778 VSTM2LQ96N03 204 aa18.3■□□□□ 0.52
CHEK1-215ENST00000533778 EBF4Q9BQW3 602 aa18.3■□□□□ 0.52
CHEK1-215ENST00000533778 NXF5Q9H1B4 397 aaKnown RBP18.3■□□□□ 0.52
CHEK1-215ENST00000533778 FOLH1BQ9HBA9 442 aa18.3■□□□□ 0.52
CHEK1-215ENST00000533778 NPHS2Q9NP85 383 aa18.3■□□□□ 0.52
CHEK1-215ENST00000533778 AGPAT4Q9NRZ5 378 aa18.3■□□□□ 0.52
CHEK1-215ENST00000533778 NTMQ9P121 344 aa18.3■□□□□ 0.52
CHEK1-215ENST00000533778 DTX4Q9Y2E6 619 aa18.3■□□□□ 0.52
CHEK1-215ENST00000533778 TNRC6AQ8NDV7 1962 aaKnown RBP18.3■□□□□ 0.52
CHEK1-215ENST00000533778 PRSS51A0A1B0GVH4 220 aa18.29■□□□□ 0.52
CHEK1-215ENST00000533778 TP53I11O14683 189 aa18.29■□□□□ 0.52
CHEK1-215ENST00000533778 ZNF354AO60765 605 aaPredicted RBP18.29■□□□□ 0.52
CHEK1-215ENST00000533778 PSMG1O95456 288 aa18.29■□□□□ 0.52
CHEK1-215ENST00000533778 C6orf47O95873 294 aa18.29■□□□□ 0.52
CHEK1-215ENST00000533778 CRYABP02511 175 aaKnown RBP18.29■□□□□ 0.52
CHEK1-215ENST00000533778 IL6P05231 212 aa18.29■□□□□ 0.52
CHEK1-215ENST00000533778 CDK9P50750 372 aaKnown RBP18.29■□□□□ 0.52
CHEK1-215ENST00000533778 PRKAG1P54619 331 aa18.29■□□□□ 0.52
CHEK1-215ENST00000533778 RPP38P78345 283 aaKnown RBP18.29■□□□□ 0.52
CHEK1-215ENST00000533778 FAM174BQ3ZCQ3 159 aa18.29■□□□□ 0.52
CHEK1-215ENST00000533778 SPDYE7PQ495Y7 208 aa18.29■□□□□ 0.52
CHEK1-215ENST00000533778 VPS26BQ4G0F5 336 aa18.29■□□□□ 0.52
CHEK1-215ENST00000533778 OR4F3Q6IEY1 312 aa18.29■□□□□ 0.52
CHEK1-215ENST00000533778 ZCCHC12Q6PEW1 402 aa18.29■□□□□ 0.52
CHEK1-215ENST00000533778 BHLHB9Q6PI77 547 aa18.29■□□□□ 0.52
CHEK1-215ENST00000533778 FAM180AQ6UWF9 173 aa18.29■□□□□ 0.52
CHEK1-215ENST00000533778 LYPD8Q6UX82 237 aa18.29■□□□□ 0.52
CHEK1-215ENST00000533778 TMEM64Q6YI46 380 aa18.29■□□□□ 0.52
CHEK1-215ENST00000533778 GALNTL5Q7Z4T8 443 aa18.29■□□□□ 0.52
CHEK1-215ENST00000533778 ZNF227Q86WZ6 799 aa18.29■□□□□ 0.52
CHEK1-215ENST00000533778 NUP43Q8NFH3 380 aa18.29■□□□□ 0.52
CHEK1-215ENST00000533778 DNAJB8Q8NHS0 232 aa18.29■□□□□ 0.52
CHEK1-215ENST00000533778 NUDT8Q8WV74 236 aa18.29■□□□□ 0.52
CHEK1-215ENST00000533778 MOAP1Q96BY2 351 aa18.29■□□□□ 0.52
CHEK1-215ENST00000533778 SNRNP40Q96DI7 357 aaKnown RBP18.29■□□□□ 0.52
CHEK1-215ENST00000533778 MS4A4EQ96PG1 132 aa18.29■□□□□ 0.52
CHEK1-215ENST00000533778 FAM120CQ9NX05 1096 aaKnown RBP18.29■□□□□ 0.52
CHEK1-215ENST00000533778 MAP10Q9P2G4 905 aa18.29■□□□□ 0.52
CHEK1-215ENST00000533778 TRIM33Q9UPN9 1127 aa18.29■□□□□ 0.52
CHEK1-215ENST00000533778 SNX8Q9Y5X2 465 aa18.29■□□□□ 0.52
CHEK1-215ENST00000533778 TLN1Q9Y490 2541 aaKnown RBP18.29■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 25.9 ms