RNA–Protein interactions for RNA: ENST00000533752.1

TSKU-204, Transcript of tsukushi, small leucine rich proteoglycan, humanhuman

TSL 4

Gene TSKU, Length 643 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSKU-204ENST00000533752 AMDHD1Q96NU7 426 aa14.59□□□□□ -0.07
TSKU-204ENST00000533752 BTBD9Q96Q07 612 aa14.59□□□□□ -0.07
TSKU-204ENST00000533752 NXF5Q9H1B4 397 aaKnown RBP14.59□□□□□ -0.07
TSKU-204ENST00000533752 TSPAN10Q9H1Z9 355 aaPredicted RBP14.59□□□□□ -0.07
TSKU-204ENST00000533752 DEPPQ9NTK1 212 aa14.59□□□□□ -0.07
TSKU-204ENST00000533752 TAS2R9Q9NYW1 312 aa14.59□□□□□ -0.07
TSKU-204ENST00000533752 BOKQ9UMX3 212 aaPredicted RBP14.59□□□□□ -0.07
TSKU-204ENST00000533752 EXO1Q9UQ84 846 aaKnown RBP14.59□□□□□ -0.07
TSKU-204ENST00000533752 NPFFR2Q9Y5X5 522 aa14.59□□□□□ -0.07
TSKU-204ENST00000533752 DOPEY1Q5JWR5 2465 aa14.59□□□□□ -0.07
TSKU-204ENST00000533752 SPTBN1Q01082 2364 aaKnown RBP14.58□□□□□ -0.08
TSKU-204ENST00000533752 ATP6AP2A0A1C7CYW4 349 aa14.58□□□□□ -0.08
TSKU-204ENST00000533752 PLOD2O00469 737 aa14.58□□□□□ -0.08
TSKU-204ENST00000533752 ATP6AP2O75787 350 aa14.58□□□□□ -0.08
TSKU-204ENST00000533752 PRPS2P11908 318 aa14.58□□□□□ -0.08
TSKU-204ENST00000533752 DRD5P21918 477 aa14.58□□□□□ -0.08
TSKU-204ENST00000533752 ABCD3P28288 659 aa14.58□□□□□ -0.08
TSKU-204ENST00000533752 SOX18P35713 384 aa14.58□□□□□ -0.08
TSKU-204ENST00000533752 EMDP50402 254 aa14.58□□□□□ -0.08
TSKU-204ENST00000533752 KCNJ2P63252 427 aa14.58□□□□□ -0.08
TSKU-204ENST00000533752 SRSF1Q07955 248 aaKnown RBP eCLIP14.58□□□□□ -0.08
TSKU-204ENST00000533752 PLCXD2Q0VAA5 305 aa14.58□□□□□ -0.08
TSKU-204ENST00000533752 BST1Q10588 318 aa14.58□□□□□ -0.08
TSKU-204ENST00000533752 DUSP8Q13202 625 aa14.58□□□□□ -0.08
TSKU-204ENST00000533752 PDE7AQ13946 482 aa14.58□□□□□ -0.08
TSKU-204ENST00000533752 PDCD2Q16342 344 aaPredicted RBP14.58□□□□□ -0.08
TSKU-204ENST00000533752 RNFT1Q5M7Z0 435 aa14.58□□□□□ -0.08
TSKU-204ENST00000533752 C6orf136Q5SQH8 315 aa14.58□□□□□ -0.08
TSKU-204ENST00000533752 CES4AQ5XG92 561 aa14.58□□□□□ -0.08
TSKU-204ENST00000533752 ATG16L1Q676U5 607 aa14.58□□□□□ -0.08
TSKU-204ENST00000533752 HDXQ7Z353 690 aa14.58□□□□□ -0.08
TSKU-204ENST00000533752 ZGRF1Q86YA3 2104 aa14.58□□□□□ -0.08
TSKU-204ENST00000533752 LIX1Q8N485 282 aa14.58□□□□□ -0.08
TSKU-204ENST00000533752 GOLGA6L1Q8N7Z2 621 aa14.58□□□□□ -0.08
TSKU-204ENST00000533752 MGARPQ8TDB4 240 aa14.58□□□□□ -0.08
TSKU-204ENST00000533752 GFM2Q969S9 779 aaKnown RBP14.58□□□□□ -0.08
TSKU-204ENST00000533752 GLIPR2Q9H4G4 154 aa14.58□□□□□ -0.08
TSKU-204ENST00000533752 IL1RL2Q9HB29 575 aa14.58□□□□□ -0.08
TSKU-204ENST00000533752 DDX18Q9NVP1 670 aaKnown RBP14.58□□□□□ -0.08
TSKU-204ENST00000533752 MAPRE3Q9UPY8 281 aa14.58□□□□□ -0.08
TSKU-204ENST00000533752 EIF3LQ9Y262 564 aaKnown RBP14.58□□□□□ -0.08
TSKU-204ENST00000533752 DTX4Q9Y2E6 619 aa14.58□□□□□ -0.08
TSKU-204ENST00000533752 CHCHD2Q9Y6H1 151 aaPredicted RBP14.58□□□□□ -0.08
TSKU-204ENST00000533752 USP9YO00507 2555 aaPredicted RBP14.58□□□□□ -0.08
TSKU-204ENST00000533752 HECTD1Q9ULT8 2610 aa14.58□□□□□ -0.08
TSKU-204ENST00000533752 DOPEY2Q9Y3R5 2298 aa14.57□□□□□ -0.08
TSKU-204ENST00000533752 A0A0G2JMM0 328 aa14.57□□□□□ -0.08
TSKU-204ENST00000533752 A0A1W2PPB8 328 aa14.57□□□□□ -0.08
TSKU-204ENST00000533752 A0A1W2PRS3 328 aa14.57□□□□□ -0.08
TSKU-204ENST00000533752 ANKRD33BA6NCL7 494 aa14.57□□□□□ -0.08
TSKU-204ENST00000533752 KIR3DP1A8MWS1 328 aa14.57□□□□□ -0.08
TSKU-204ENST00000533752 SCAMP2O15127 329 aaKnown RBP14.57□□□□□ -0.08
TSKU-204ENST00000533752 TO15178 435 aa14.57□□□□□ -0.08
TSKU-204ENST00000533752 AKAP10O43572 662 aa14.57□□□□□ -0.08
TSKU-204ENST00000533752 SLC19A2O60779 497 aa14.57□□□□□ -0.08
TSKU-204ENST00000533752 SEMA7AO75326 666 aa14.57□□□□□ -0.08
TSKU-204ENST00000533752 ERN1O75460 977 aaKnown RBP14.57□□□□□ -0.08
TSKU-204ENST00000533752 PPM1BO75688 479 aa14.57□□□□□ -0.08
TSKU-204ENST00000533752 GLSO94925 669 aaPredicted RBP14.57□□□□□ -0.08
TSKU-204ENST00000533752 LRATO95237 230 aa14.57□□□□□ -0.08
TSKU-204ENST00000533752 RFC3P40938 356 aa14.57□□□□□ -0.08
TSKU-204ENST00000533752 MC3RP41968 323 aa14.57□□□□□ -0.08
TSKU-204ENST00000533752 WDR4P57081 412 aaKnown RBP14.57□□□□□ -0.08
TSKU-204ENST00000533752 PPIAP62937 165 aaKnown RBP14.57□□□□□ -0.08
TSKU-204ENST00000533752 ZNF155Q12901 538 aaPredicted RBP14.57□□□□□ -0.08
TSKU-204ENST00000533752 HYAL4Q2M3T9 481 aa14.57□□□□□ -0.08
TSKU-204ENST00000533752 PAOXQ6QHF9 649 aa14.57□□□□□ -0.08
TSKU-204ENST00000533752 TMEM107Q6UX40 140 aa14.57□□□□□ -0.08
TSKU-204ENST00000533752 LRRC34Q8IZ02 419 aa14.57□□□□□ -0.08
TSKU-204ENST00000533752 SLC34A3Q8N130 599 aa14.57□□□□□ -0.08
TSKU-204ENST00000533752 FAM109AQ8N4B1 249 aa14.57□□□□□ -0.08
TSKU-204ENST00000533752 NATD1Q8N6N6 113 aa14.57□□□□□ -0.08
TSKU-204ENST00000533752 OR7G2Q8NG99 324 aa14.57□□□□□ -0.08
TSKU-204ENST00000533752 CLHC1Q8NHS4 586 aa14.57□□□□□ -0.08
TSKU-204ENST00000533752 DIO2Q92813 273 aa14.57□□□□□ -0.08
TSKU-204ENST00000533752 C3orf30Q96M34 536 aa14.57□□□□□ -0.08
TSKU-204ENST00000533752 VSTM2LQ96N03 204 aa14.57□□□□□ -0.08
TSKU-204ENST00000533752 SORT1Q99523 831 aa14.57□□□□□ -0.08
TSKU-204ENST00000533752 TTTY12Q9BZ98 90 aa14.57□□□□□ -0.08
TSKU-204ENST00000533752 VIPAS39Q9H9C1 493 aa14.57□□□□□ -0.08
TSKU-204ENST00000533752 ACSS1Q9NUB1 689 aaPredicted RBP14.57□□□□□ -0.08
TSKU-204ENST00000533752 ATAD3AQ9NVI7 634 aa14.57□□□□□ -0.08
TSKU-204ENST00000533752 THAP1Q9NVV9 213 aa14.57□□□□□ -0.08
TSKU-204ENST00000533752 ASIC5Q9NY37 505 aa14.57□□□□□ -0.08
TSKU-204ENST00000533752 NOP53Q9NZM5 478 aaKnown RBP14.57□□□□□ -0.08
TSKU-204ENST00000533752 SH3BP4Q9P0V3 963 aa14.57□□□□□ -0.08
TSKU-204ENST00000533752 B4GALT7Q9UBV7 327 aa14.57□□□□□ -0.08
TSKU-204ENST00000533752 ERRFI1Q9UJM3 462 aaPredicted RBP14.57□□□□□ -0.08
TSKU-204ENST00000533752 C19orf53Q9UNZ5 99 aaPredicted RBP14.57□□□□□ -0.08
TSKU-204ENST00000533752 GPR55Q9Y2T6 319 aaPredicted RBP14.57□□□□□ -0.08
TSKU-204ENST00000533752 SEC23IPQ9Y6Y8 1000 aaKnown RBP14.57□□□□□ -0.08
TSKU-204ENST00000533752 CROCCQ5TZA2 2017 aa14.57□□□□□ -0.08
TSKU-204ENST00000533752 PINLYPA6NC86 204 aa14.56□□□□□ -0.08
TSKU-204ENST00000533752 G3V3Y1 287 aa14.56□□□□□ -0.08
TSKU-204ENST00000533752 HS6ST1O60243 411 aa14.56□□□□□ -0.08
TSKU-204ENST00000533752 ABCB7O75027 752 aa14.56□□□□□ -0.08
TSKU-204ENST00000533752 H2AFXP16104 143 aaPredicted RBP14.56□□□□□ -0.08
TSKU-204ENST00000533752 PRPS1L1P21108 318 aa14.56□□□□□ -0.08
TSKU-204ENST00000533752 KRT20P35900 424 aa14.56□□□□□ -0.08
TSKU-204ENST00000533752 FRKP42685 505 aaPredicted RBP14.56□□□□□ -0.08
Retrieved 100 of 20,778 RNA–protein pairs in 43.5 ms