RNA–Protein interactions for RNA: ENST00000533595.5

SF3B2-214, Transcript of splicing factor 3b subunit 2, humanhuman

TSL 5

Gene SF3B2, Length 1,081 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B2-214ENST00000533595 NUP214P35658 2090 aaPredicted RBP13.49□□□□□ -0.25
SF3B2-214ENST00000533595 TRAV17A0A0B4J275 112 aa13.48□□□□□ -0.25
SF3B2-214ENST00000533595 PRSS51A0A1B0GVH4 220 aa13.48□□□□□ -0.25
SF3B2-214ENST00000533595 A8MVJ9 347 aa13.48□□□□□ -0.25
SF3B2-214ENST00000533595 RNASET2O00584 256 aaKnown RBP13.48□□□□□ -0.25
SF3B2-214ENST00000533595 EMC8O43402 210 aa13.48□□□□□ -0.25
SF3B2-214ENST00000533595 PRB1P04280 392 aa13.48□□□□□ -0.25
SF3B2-214ENST00000533595 PGRP06401 933 aa13.48□□□□□ -0.25
SF3B2-214ENST00000533595 NCF2P19878 526 aaPredicted RBP13.48□□□□□ -0.25
SF3B2-214ENST00000533595 SOX3P41225 446 aa13.48□□□□□ -0.25
SF3B2-214ENST00000533595 PPICP45877 212 aa13.48□□□□□ -0.25
SF3B2-214ENST00000533595 MRPL19P49406 292 aaKnown RBP13.48□□□□□ -0.25
SF3B2-214ENST00000533595 NR0B1P51843 470 aaKnown RBP13.48□□□□□ -0.25
SF3B2-214ENST00000533595 DGKQP52824 942 aa13.48□□□□□ -0.25
SF3B2-214ENST00000533595 WNT3P56703 355 aa13.48□□□□□ -0.25
SF3B2-214ENST00000533595 DCAF7P61962 342 aa13.48□□□□□ -0.25
SF3B2-214ENST00000533595 PHC1P78364 1004 aa13.48□□□□□ -0.25
SF3B2-214ENST00000533595 ZNF169Q14929 603 aaPredicted RBP13.48□□□□□ -0.25
SF3B2-214ENST00000533595 OR1C1Q15619 314 aa13.48□□□□□ -0.25
SF3B2-214ENST00000533595 PAOXQ6QHF9 649 aa13.48□□□□□ -0.25
SF3B2-214ENST00000533595 OPN5Q6U736 354 aa13.48□□□□□ -0.25
SF3B2-214ENST00000533595 SZRD1Q7Z422 152 aa13.48□□□□□ -0.25
SF3B2-214ENST00000533595 TAGAPQ8N103 731 aa13.48□□□□□ -0.25
SF3B2-214ENST00000533595 PSMA8Q8TAA3 256 aa13.48□□□□□ -0.25
SF3B2-214ENST00000533595 SIGLEC12Q96PQ1 595 aa13.48□□□□□ -0.25
SF3B2-214ENST00000533595 ITPAQ9BY32 194 aa13.48□□□□□ -0.25
SF3B2-214ENST00000533595 TRIM45Q9H8W5 580 aaPredicted RBP13.48□□□□□ -0.25
SF3B2-214ENST00000533595 FOLH1BQ9HBA9 442 aa13.48□□□□□ -0.25
SF3B2-214ENST00000533595 NEUROD4Q9HD90 331 aa13.48□□□□□ -0.25
SF3B2-214ENST00000533595 SIRT3Q9NTG7 399 aaPredicted RBP13.48□□□□□ -0.25
SF3B2-214ENST00000533595 HPF1Q9NWY4 346 aa13.48□□□□□ -0.25
SF3B2-214ENST00000533595 FAM120CQ9NX05 1096 aaKnown RBP13.48□□□□□ -0.25
SF3B2-214ENST00000533595 NTMQ9P121 344 aa13.48□□□□□ -0.25
SF3B2-214ENST00000533595 ANAPC2Q9UJX6 822 aa13.48□□□□□ -0.25
SF3B2-214ENST00000533595 PCDHGB4Q9UN71 923 aa13.48□□□□□ -0.25
SF3B2-214ENST00000533595 TRIM33Q9UPN9 1127 aa13.48□□□□□ -0.25
SF3B2-214ENST00000533595 ERVK-11Q9UQG0 969 aa13.48□□□□□ -0.25
SF3B2-214ENST00000533595 SNX8Q9Y5X2 465 aa13.48□□□□□ -0.25
SF3B2-214ENST00000533595 COPG1Q9Y678 874 aaKnown RBP13.48□□□□□ -0.25
SF3B2-214ENST00000533595 ZNF354AO60765 605 aaPredicted RBP13.47□□□□□ -0.25
SF3B2-214ENST00000533595 SCN2BO60939 215 aa13.47□□□□□ -0.25
SF3B2-214ENST00000533595 NME6O75414 186 aaPredicted RBP13.47□□□□□ -0.25
SF3B2-214ENST00000533595 ERN1O75460 977 aaKnown RBP13.47□□□□□ -0.25
SF3B2-214ENST00000533595 OR6B1O95007 311 aa13.47□□□□□ -0.25
SF3B2-214ENST00000533595 PSMG1O95456 288 aa13.47□□□□□ -0.25
SF3B2-214ENST00000533595 NADKO95544 446 aaPredicted RBP13.47□□□□□ -0.25
SF3B2-214ENST00000533595 IL6P05231 212 aa13.47□□□□□ -0.25
SF3B2-214ENST00000533595 ABCB1P08183 1280 aaPredicted RBP13.47□□□□□ -0.25
SF3B2-214ENST00000533595 DRD5P21918 477 aa13.47□□□□□ -0.25
SF3B2-214ENST00000533595 LSP1P33241 339 aa13.47□□□□□ -0.25
SF3B2-214ENST00000533595 ATP4BP51164 291 aa13.47□□□□□ -0.25
SF3B2-214ENST00000533595 POLR2JP52435 117 aaKnown RBP13.47□□□□□ -0.25
SF3B2-214ENST00000533595 ARFIP2P53365 341 aa13.47□□□□□ -0.25
SF3B2-214ENST00000533595 PRKAG1P54619 331 aa13.47□□□□□ -0.25
SF3B2-214ENST00000533595 NRG3P56975 720 aa13.47□□□□□ -0.25
SF3B2-214ENST00000533595 HBA1P69905 142 aa13.47□□□□□ -0.25
SF3B2-214ENST00000533595 PRR5P85299 388 aa13.47□□□□□ -0.25
SF3B2-214ENST00000533595 SF3A3Q12874 501 aaKnown RBP eCLIP13.47□□□□□ -0.252e-7■■■□□ 15.7
SF3B2-214ENST00000533595 ZNF155Q12901 538 aaPredicted RBP13.47□□□□□ -0.25
SF3B2-214ENST00000533595 PLEKHN1Q494U1 663 aaPredicted RBP13.47□□□□□ -0.25
SF3B2-214ENST00000533595 SPDYE7PQ495Y7 208 aa13.47□□□□□ -0.25
SF3B2-214ENST00000533595 METTL21CQ5VZV1 264 aa13.47□□□□□ -0.25
SF3B2-214ENST00000533595 SPINK14Q6IE38 97 aa13.47□□□□□ -0.25
SF3B2-214ENST00000533595 IL20RBQ6UXL0 311 aa13.47□□□□□ -0.25
SF3B2-214ENST00000533595 TMEM64Q6YI46 380 aa13.47□□□□□ -0.25
SF3B2-214ENST00000533595 ANKRD46Q86W74 232 aa13.47□□□□□ -0.25
SF3B2-214ENST00000533595 GPALPP1Q8IXQ4 340 aa13.47□□□□□ -0.25
SF3B2-214ENST00000533595 CLECL1Q8IZS7 167 aa13.47□□□□□ -0.25
SF3B2-214ENST00000533595 CYP4Z2PQ8N1L4 340 aa13.47□□□□□ -0.25
SF3B2-214ENST00000533595 MDS2Q8NDY4 140 aa13.47□□□□□ -0.25
SF3B2-214ENST00000533595 NUP43Q8NFH3 380 aa13.47□□□□□ -0.25
SF3B2-214ENST00000533595 OR9I1Q8NGQ6 314 aa13.47□□□□□ -0.25
SF3B2-214ENST00000533595 TMEM125Q96AQ2 219 aa13.47□□□□□ -0.25
SF3B2-214ENST00000533595 FAM120BQ96EK7 910 aaKnown RBP13.47□□□□□ -0.25
SF3B2-214ENST00000533595 LCORQ96JN0 433 aaPredicted RBP13.47□□□□□ -0.25
SF3B2-214ENST00000533595 VSTM2LQ96N03 204 aa13.47□□□□□ -0.25
SF3B2-214ENST00000533595 MS4A4EQ96PG1 132 aa13.47□□□□□ -0.25
SF3B2-214ENST00000533595 BTBD9Q96Q07 612 aa13.47□□□□□ -0.25
SF3B2-214ENST00000533595 OR52E6Q96RD3 313 aa13.47□□□□□ -0.25
SF3B2-214ENST00000533595 NXF5Q9H1B4 397 aaKnown RBP13.47□□□□□ -0.25
SF3B2-214ENST00000533595 CXorf36Q9H7Y0 433 aa13.47□□□□□ -0.25
SF3B2-214ENST00000533595 KLHL14Q9P2G3 628 aa13.47□□□□□ -0.25
SF3B2-214ENST00000533595 GPR55Q9Y2T6 319 aaPredicted RBP13.47□□□□□ -0.25
SF3B2-214ENST00000533595 FAM234BA2RU67 622 aa13.46□□□□□ -0.25
SF3B2-214ENST00000533595 FRG2CA6NGY1 282 aa13.46□□□□□ -0.25
SF3B2-214ENST00000533595 ACOX3O15254 700 aa13.46□□□□□ -0.25
SF3B2-214ENST00000533595 SLC25A12O75746 678 aa13.46□□□□□ -0.25
SF3B2-214ENST00000533595 NEURL1O76050 574 aa13.46□□□□□ -0.25
SF3B2-214ENST00000533595 CPSF4O95639 269 aaKnown RBP13.46□□□□□ -0.25
SF3B2-214ENST00000533595 CD46P15529 392 aa13.46□□□□□ -0.25
SF3B2-214ENST00000533595 ZFP36L2P47974 494 aaKnown RBP13.46□□□□□ -0.25
SF3B2-214ENST00000533595 CCT3P49368 545 aaKnown RBP13.46□□□□□ -0.25
SF3B2-214ENST00000533595 SEC24CP53992 1094 aa13.46□□□□□ -0.25
SF3B2-214ENST00000533595 CORO7P57737 925 aa13.46□□□□□ -0.25
SF3B2-214ENST00000533595 GNGT1P63211 74 aa13.46□□□□□ -0.25
SF3B2-214ENST00000533595 LRRC74AQ0VAA2 488 aa13.46□□□□□ -0.25
SF3B2-214ENST00000533595 SQLEQ14534 574 aa13.46□□□□□ -0.25
SF3B2-214ENST00000533595 ZNHIT3Q15649 155 aaPredicted RBP13.46□□□□□ -0.25
SF3B2-214ENST00000533595 NNATQ16517 81 aa13.46□□□□□ -0.25
SF3B2-214ENST00000533595 ZNF766Q5HY98 468 aa13.46□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 47.9 ms