RNA–Protein interactions for RNA: ENST00000533209.5

SSBP3-214, Transcript of single stranded DNA binding protein 3, humanhuman

TSL 4

Gene SSBP3, Length 552 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP3-214ENST00000533209 RYDENQ9NUL5 291 aaKnown RBP11.07□□□□□ -0.64
SSBP3-214ENST00000533209 DDX18Q9NVP1 670 aaKnown RBP11.07□□□□□ -0.64
SSBP3-214ENST00000533209 HPF1Q9NWY4 346 aa11.07□□□□□ -0.64
SSBP3-214ENST00000533209 NTMQ9P121 344 aa11.07□□□□□ -0.64
SSBP3-214ENST00000533209 PRODH2Q9UF12 536 aa11.07□□□□□ -0.64
SSBP3-214ENST00000533209 NTNG1Q9Y2I2 539 aa11.07□□□□□ -0.64
SSBP3-214ENST00000533209 CROCCQ5TZA2 2017 aa11.06□□□□□ -0.64
SSBP3-214ENST00000533209 UBDO15205 165 aa11.06□□□□□ -0.64
SSBP3-214ENST00000533209 NME2P1O60361 137 aa11.06□□□□□ -0.64
SSBP3-214ENST00000533209 COQ9O75208 318 aa11.06□□□□□ -0.64
SSBP3-214ENST00000533209 C6orf47O95873 294 aa11.06□□□□□ -0.64
SSBP3-214ENST00000533209 FBXO45P0C2W1 286 aa11.06□□□□□ -0.64
SSBP3-214ENST00000533209 IDO1P14902 403 aa11.06□□□□□ -0.64
SSBP3-214ENST00000533209 CD46P15529 392 aa11.06□□□□□ -0.64
SSBP3-214ENST00000533209 DRD5P21918 477 aa11.06□□□□□ -0.64
SSBP3-214ENST00000533209 NME2P22392 152 aa11.06□□□□□ -0.64
SSBP3-214ENST00000533209 GPC1P35052 558 aa11.06□□□□□ -0.64
SSBP3-214ENST00000533209 MDH1P40925 334 aaKnown RBP11.06□□□□□ -0.64
SSBP3-214ENST00000533209 CLNS1AP54105 237 aaKnown RBP11.06□□□□□ -0.64
SSBP3-214ENST00000533209 NME5P56597 212 aa11.06□□□□□ -0.64
SSBP3-214ENST00000533209 WNT3P56703 355 aa11.06□□□□□ -0.64
SSBP3-214ENST00000533209 DCAF7P61962 342 aa11.06□□□□□ -0.64
SSBP3-214ENST00000533209 PHC1P78364 1004 aa11.06□□□□□ -0.64
SSBP3-214ENST00000533209 TLE1Q04724 770 aa11.06□□□□□ -0.64
SSBP3-214ENST00000533209 SRSF11Q05519 484 aaKnown RBP11.06□□□□□ -0.64
SSBP3-214ENST00000533209 NNATQ16517 81 aa11.06□□□□□ -0.64
SSBP3-214ENST00000533209 PDCD4Q53EL6 469 aaKnown RBP11.06□□□□□ -0.64
SSBP3-214ENST00000533209 OR4F3Q6IEY1 312 aa11.06□□□□□ -0.64
SSBP3-214ENST00000533209 ACAD11Q709F0 780 aa11.06□□□□□ -0.64
SSBP3-214ENST00000533209 GALNTL5Q7Z4T8 443 aa11.06□□□□□ -0.64
SSBP3-214ENST00000533209 TAGAPQ8N103 731 aa11.06□□□□□ -0.64
SSBP3-214ENST00000533209 OR8J2Q8NGG1 315 aa11.06□□□□□ -0.64
SSBP3-214ENST00000533209 RFWD2Q8NHY2 731 aa11.06□□□□□ -0.64
SSBP3-214ENST00000533209 PSMA8Q8TAA3 256 aa11.06□□□□□ -0.64
SSBP3-214ENST00000533209 OR5P2Q8WZ92 322 aa11.06□□□□□ -0.64
SSBP3-214ENST00000533209 SNRNP40Q96DI7 357 aaKnown RBP11.06□□□□□ -0.64
SSBP3-214ENST00000533209 SPACA9Q96E40 222 aaPredicted RBP11.06□□□□□ -0.64
SSBP3-214ENST00000533209 THOC1Q96FV9 657 aaKnown RBP11.06□□□□□ -0.64
SSBP3-214ENST00000533209 LCORQ96JN0 433 aaPredicted RBP11.06□□□□□ -0.64
SSBP3-214ENST00000533209 C5orf34Q96MH7 638 aa11.06□□□□□ -0.64
SSBP3-214ENST00000533209 BTBD9Q96Q07 612 aa11.06□□□□□ -0.64
SSBP3-214ENST00000533209 TAAR6Q96RI8 345 aa11.06□□□□□ -0.64
SSBP3-214ENST00000533209 CCDC28BQ9BUN5 200 aa11.06□□□□□ -0.64
SSBP3-214ENST00000533209 TRIM4Q9C037 500 aa11.06□□□□□ -0.64
SSBP3-214ENST00000533209 CCDC134Q9H6E4 229 aa11.06□□□□□ -0.64
SSBP3-214ENST00000533209 TCF7L2Q9NQB0 619 aa11.06□□□□□ -0.64
SSBP3-214ENST00000533209 SIRT3Q9NTG7 399 aaPredicted RBP11.06□□□□□ -0.64
SSBP3-214ENST00000533209 TAS2R9Q9NYW1 312 aa11.06□□□□□ -0.64
SSBP3-214ENST00000533209 MAP10Q9P2G4 905 aa11.06□□□□□ -0.64
SSBP3-214ENST00000533209 ERVK-11Q9UQG0 969 aa11.06□□□□□ -0.64
SSBP3-214ENST00000533209 GPR55Q9Y2T6 319 aaPredicted RBP11.06□□□□□ -0.64
SSBP3-214ENST00000533209 NPFFR2Q9Y5X5 522 aa11.06□□□□□ -0.64
SSBP3-214ENST00000533209 FRG2CA6NGY1 282 aa11.05□□□□□ -0.64
SSBP3-214ENST00000533209 C9JVG2 144 aa11.05□□□□□ -0.64
SSBP3-214ENST00000533209 E9PBE3 544 aa11.05□□□□□ -0.64
SSBP3-214ENST00000533209 TO15178 435 aa11.05□□□□□ -0.64
SSBP3-214ENST00000533209 POLR3GO15318 223 aaPredicted RBP11.05□□□□□ -0.64
SSBP3-214ENST00000533209 SCN2BO60939 215 aa11.05□□□□□ -0.64
SSBP3-214ENST00000533209 ERN1O75460 977 aaKnown RBP11.05□□□□□ -0.64
SSBP3-214ENST00000533209 CT45A8P0DMV1 189 aa11.05□□□□□ -0.64
SSBP3-214ENST00000533209 CT45A9P0DMV2 189 aa11.05□□□□□ -0.64
SSBP3-214ENST00000533209 ABCD3P28288 659 aa11.05□□□□□ -0.64
SSBP3-214ENST00000533209 KIR3DL1P43629 444 aa11.05□□□□□ -0.64
SSBP3-214ENST00000533209 ZFP36L2P47974 494 aaKnown RBP11.05□□□□□ -0.64
SSBP3-214ENST00000533209 NRG3P56975 720 aa11.05□□□□□ -0.64
SSBP3-214ENST00000533209 CORO7P57737 925 aa11.05□□□□□ -0.64
SSBP3-214ENST00000533209 ZNF155Q12901 538 aaPredicted RBP11.05□□□□□ -0.64
SSBP3-214ENST00000533209 RPS6KA2Q15349 733 aa11.05□□□□□ -0.64
SSBP3-214ENST00000533209 INAQ16352 499 aa11.05□□□□□ -0.64
SSBP3-214ENST00000533209 MAPKAPK3Q16644 382 aa11.05□□□□□ -0.64
SSBP3-214ENST00000533209 GSTA3Q16772 222 aa11.05□□□□□ -0.64
SSBP3-214ENST00000533209 DPY19L1Q2PZI1 675 aa11.05□□□□□ -0.64
SSBP3-214ENST00000533209 FAM174BQ3ZCQ3 159 aa11.05□□□□□ -0.64
SSBP3-214ENST00000533209 CT45A2Q5DJT8 189 aa11.05□□□□□ -0.64
SSBP3-214ENST00000533209 SPANXN4Q5MJ08 99 aa11.05□□□□□ -0.64
SSBP3-214ENST00000533209 NPSR1Q6W5P4 371 aa11.05□□□□□ -0.64
SSBP3-214ENST00000533209 RTL4Q6ZR62 310 aa11.05□□□□□ -0.64
SSBP3-214ENST00000533209 ZNF605Q86T29 641 aa11.05□□□□□ -0.64
SSBP3-214ENST00000533209 GOLM1Q8NBJ4 401 aa11.05□□□□□ -0.64
SSBP3-214ENST00000533209 TMEM178AQ8NBL3 297 aa11.05□□□□□ -0.64
SSBP3-214ENST00000533209 PSD4Q8NDX1 1056 aa11.05□□□□□ -0.64
SSBP3-214ENST00000533209 CPT1CQ8TCG5 803 aa11.05□□□□□ -0.64
SSBP3-214ENST00000533209 STON2Q8WXE9 905 aa11.05□□□□□ -0.64
SSBP3-214ENST00000533209 TMEM125Q96AQ2 219 aa11.05□□□□□ -0.64
SSBP3-214ENST00000533209 HSPBAP1Q96EW2 488 aa11.05□□□□□ -0.64
SSBP3-214ENST00000533209 SGCZQ96LD1 299 aa11.05□□□□□ -0.64
SSBP3-214ENST00000533209 BARD1Q99728 777 aaKnown RBP11.05□□□□□ -0.64
SSBP3-214ENST00000533209 CXorf36Q9H7Y0 433 aa11.05□□□□□ -0.64
SSBP3-214ENST00000533209 SH2D2AQ9NP31 389 aa11.05□□□□□ -0.64
SSBP3-214ENST00000533209 NPHS2Q9NP85 383 aa11.05□□□□□ -0.64
SSBP3-214ENST00000533209 TIMMDC1Q9NPL8 285 aa11.05□□□□□ -0.64
SSBP3-214ENST00000533209 SDR39U1Q9NRG7 319 aaPredicted RBP11.05□□□□□ -0.64
SSBP3-214ENST00000533209 DEPPQ9NTK1 212 aa11.05□□□□□ -0.64
SSBP3-214ENST00000533209 ASF1BQ9NVP2 202 aa11.05□□□□□ -0.64
SSBP3-214ENST00000533209 DCTN4Q9UJW0 460 aa11.05□□□□□ -0.64
SSBP3-214ENST00000533209 KLF13Q9Y2Y9 288 aaPredicted RBP11.05□□□□□ -0.64
SSBP3-214ENST00000533209 COPG1Q9Y678 874 aaKnown RBP11.05□□□□□ -0.64
SSBP3-214ENST00000533209 GIMAP1-GIMAP5A0A087WTJ2 511 aa11.04□□□□□ -0.64
SSBP3-214ENST00000533209 RNASET2O00584 256 aaKnown RBP11.04□□□□□ -0.64
SSBP3-214ENST00000533209 ACOX3O15254 700 aa11.04□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms