RNA–Protein interactions for RNA: ENST00000532935.5

CPSF1-210, Transcript of cleavage and polyadenylation specific factor 1, humanhuman

TSL 5

Gene CPSF1, Length 506 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF1-210ENST00000532935 ACOT7O00154 380 aa14.14□□□□□ -0.15
CPSF1-210ENST00000532935 BIRC5O15392 142 aa14.14□□□□□ -0.15
CPSF1-210ENST00000532935 ZNHIT1O43257 154 aa14.14□□□□□ -0.15
CPSF1-210ENST00000532935 RRP9O43818 475 aaKnown RBP14.14□□□□□ -0.15
CPSF1-210ENST00000532935 CDC40O60508 579 aaKnown RBP eCLIP14.14□□□□□ -0.15
CPSF1-210ENST00000532935 ZWINTO95229 277 aa14.14□□□□□ -0.15
CPSF1-210ENST00000532935 DHRS4L1P0CG22 281 aa14.14□□□□□ -0.15
CPSF1-210ENST00000532935 SDC1P18827 310 aa14.14□□□□□ -0.15
CPSF1-210ENST00000532935 ABCD3P28288 659 aa14.14□□□□□ -0.15
CPSF1-210ENST00000532935 TMED10P49755 219 aaKnown RBP14.14□□□□□ -0.15
CPSF1-210ENST00000532935 CASP6P55212 293 aa14.14□□□□□ -0.15
CPSF1-210ENST00000532935 FBXW4P57775 412 aa14.14□□□□□ -0.15
CPSF1-210ENST00000532935 FOXO1Q12778 655 aa14.14□□□□□ -0.15
CPSF1-210ENST00000532935 MPP2Q14168 576 aa14.14□□□□□ -0.15
CPSF1-210ENST00000532935 RPS6KA2Q15349 733 aa14.14□□□□□ -0.15
CPSF1-210ENST00000532935 CHI3L2Q15782 390 aa14.14□□□□□ -0.15
CPSF1-210ENST00000532935 NNATQ16517 81 aa14.14□□□□□ -0.15
CPSF1-210ENST00000532935 C3AR1Q16581 482 aa14.14□□□□□ -0.15
CPSF1-210ENST00000532935 GALNTL6Q49A17 601 aa14.14□□□□□ -0.15
CPSF1-210ENST00000532935 RFTN2Q52LD8 501 aaPredicted RBP14.14□□□□□ -0.15
CPSF1-210ENST00000532935 PRAMEF20Q5VT98 475 aa14.14□□□□□ -0.15
CPSF1-210ENST00000532935 CES4AQ5XG92 561 aa14.14□□□□□ -0.15
CPSF1-210ENST00000532935 FGD2Q7Z6J4 655 aa14.14□□□□□ -0.15
CPSF1-210ENST00000532935 SLC22A16Q86VW1 577 aa14.14□□□□□ -0.15
CPSF1-210ENST00000532935 PRR22Q8IZ63 422 aa14.14□□□□□ -0.15
CPSF1-210ENST00000532935 LCORQ96JN0 433 aaPredicted RBP14.14□□□□□ -0.15
CPSF1-210ENST00000532935 CCT7Q99832 543 aa14.14□□□□□ -0.15
CPSF1-210ENST00000532935 ANKRA2Q9H9E1 313 aa14.14□□□□□ -0.15
CPSF1-210ENST00000532935 PROK2Q9HC23 129 aa14.14□□□□□ -0.15
CPSF1-210ENST00000532935 TUBA8Q9NY65 449 aaPredicted RBP14.14□□□□□ -0.15
CPSF1-210ENST00000532935 SH3BGRL2Q9UJC5 107 aa14.14□□□□□ -0.15
CPSF1-210ENST00000532935 CNOT11Q9UKZ1 510 aaKnown RBP14.14□□□□□ -0.15
CPSF1-210ENST00000532935 SEC23IPQ9Y6Y8 1000 aaKnown RBP14.14□□□□□ -0.15
CPSF1-210ENST00000532935 NCOA6Q14686 2063 aaPredicted RBP14.14□□□□□ -0.15
CPSF1-210ENST00000532935 CCL21O00585 134 aa14.13□□□□□ -0.15
CPSF1-210ENST00000532935 TP53I11O14683 189 aa14.13□□□□□ -0.15
CPSF1-210ENST00000532935 ACOX3O15254 700 aa14.13□□□□□ -0.15
CPSF1-210ENST00000532935 PLOD3O60568 738 aa14.13□□□□□ -0.15
CPSF1-210ENST00000532935 LYPLA1O75608 230 aaPredicted RBP14.13□□□□□ -0.15
CPSF1-210ENST00000532935 LRATO95237 230 aa14.13□□□□□ -0.15
CPSF1-210ENST00000532935 HSPA4LO95757 839 aa14.13□□□□□ -0.15
CPSF1-210ENST00000532935 SERPINE1P05121 402 aa14.13□□□□□ -0.15
CPSF1-210ENST00000532935 JUNP05412 331 aaKnown RBP14.13□□□□□ -0.15
CPSF1-210ENST00000532935 GP1BBP13224 206 aa14.13□□□□□ -0.15
CPSF1-210ENST00000532935 ABOP16442 354 aa14.13□□□□□ -0.15
CPSF1-210ENST00000532935 NTSP30990 170 aa14.13□□□□□ -0.15
CPSF1-210ENST00000532935 PPICP45877 212 aa14.13□□□□□ -0.15
CPSF1-210ENST00000532935 NCBP2P52298 156 aaKnown RBP eCLIP14.13□□□□□ -0.15
CPSF1-210ENST00000532935 DCAF7P61962 342 aa14.13□□□□□ -0.15
CPSF1-210ENST00000532935 KCNJ2P63252 427 aa14.13□□□□□ -0.15
CPSF1-210ENST00000532935 HYAL4Q2M3T9 481 aa14.13□□□□□ -0.15
CPSF1-210ENST00000532935 XKR7Q5GH72 579 aa14.13□□□□□ -0.15
CPSF1-210ENST00000532935 TMEM251Q8N6I4 163 aa14.13□□□□□ -0.15
CPSF1-210ENST00000532935 OR7G2Q8NG99 324 aa14.13□□□□□ -0.15
CPSF1-210ENST00000532935 GFM2Q969S9 779 aaKnown RBP14.13□□□□□ -0.15
CPSF1-210ENST00000532935 HSPBAP1Q96EW2 488 aa14.13□□□□□ -0.15
CPSF1-210ENST00000532935 PPP3R2Q96LZ3 170 aa14.13□□□□□ -0.15
CPSF1-210ENST00000532935 TSSK3Q96PN8 268 aa14.13□□□□□ -0.15
CPSF1-210ENST00000532935 SH3GL2Q99962 352 aa14.13□□□□□ -0.15
CPSF1-210ENST00000532935 STMN4Q9H169 189 aaPredicted RBP14.13□□□□□ -0.15
CPSF1-210ENST00000532935 DEFB127Q9H1M4 99 aa14.13□□□□□ -0.15
CPSF1-210ENST00000532935 ZDHHC11Q9H8X9 412 aa14.13□□□□□ -0.15
CPSF1-210ENST00000532935 PLSCR2Q9NRY7 297 aa14.13□□□□□ -0.15
CPSF1-210ENST00000532935 GIMAP2Q9UG22 337 aa14.13□□□□□ -0.15
CPSF1-210ENST00000532935 TINAGQ9UJW2 476 aa14.13□□□□□ -0.15
CPSF1-210ENST00000532935 CRYBG3Q68DQ2 2970 aa14.13□□□□□ -0.15
CPSF1-210ENST00000532935 A0A1B0GTH9 108 aa14.12□□□□□ -0.15
CPSF1-210ENST00000532935 A1L4Q6 167 aa14.12□□□□□ -0.15
CPSF1-210ENST00000532935 FRG2CA6NGY1 282 aa14.12□□□□□ -0.15
CPSF1-210ENST00000532935 TMEM114B3SHH9 223 aa14.12□□□□□ -0.15
CPSF1-210ENST00000532935 AKAP10O43572 662 aa14.12□□□□□ -0.15
CPSF1-210ENST00000532935 ITM2AO43736 263 aa14.12□□□□□ -0.15
CPSF1-210ENST00000532935 ZG16O60844 167 aa14.12□□□□□ -0.15
CPSF1-210ENST00000532935 SKAP2O75563 359 aaPredicted RBP14.12□□□□□ -0.15
CPSF1-210ENST00000532935 PPM1BO75688 479 aa14.12□□□□□ -0.15
CPSF1-210ENST00000532935 PDE9AO76083 593 aa14.12□□□□□ -0.15
CPSF1-210ENST00000532935 SLITRK5O94991 958 aa14.12□□□□□ -0.15
CPSF1-210ENST00000532935 BCKDHAP12694 445 aa14.12□□□□□ -0.15
CPSF1-210ENST00000532935 NAGAP17050 411 aa14.12□□□□□ -0.15
CPSF1-210ENST00000532935 DRD5P21918 477 aa14.12□□□□□ -0.15
CPSF1-210ENST00000532935 PTGS2P35354 604 aa14.12□□□□□ -0.15
CPSF1-210ENST00000532935 MAGEA5P43359 124 aa14.12□□□□□ -0.15
CPSF1-210ENST00000532935 ABCE1P61221 599 aaKnown RBP14.12□□□□□ -0.15
CPSF1-210ENST00000532935 TBCELQ5QJ74 424 aa14.12□□□□□ -0.15
CPSF1-210ENST00000532935 FAM109AQ8N4B1 249 aa14.12□□□□□ -0.15
CPSF1-210ENST00000532935 CLHC1Q8NHS4 586 aa14.12□□□□□ -0.15
CPSF1-210ENST00000532935 SPPL2AQ8TCT8 520 aa14.12□□□□□ -0.15
CPSF1-210ENST00000532935 DIO2Q92813 273 aa14.12□□□□□ -0.15
CPSF1-210ENST00000532935 OMA1Q96E52 524 aa14.12□□□□□ -0.15
CPSF1-210ENST00000532935 C3orf30Q96M34 536 aa14.12□□□□□ -0.15
CPSF1-210ENST00000532935 AMDHD1Q96NU7 426 aa14.12□□□□□ -0.15
CPSF1-210ENST00000532935 BTBD9Q96Q07 612 aa14.12□□□□□ -0.15
CPSF1-210ENST00000532935 SECISBP2Q96T21 854 aaKnown RBP14.12□□□□□ -0.15
CPSF1-210ENST00000532935 DOHHQ9BU89 302 aa14.12□□□□□ -0.15
CPSF1-210ENST00000532935 GLIPR2Q9H4G4 154 aa14.12□□□□□ -0.15
CPSF1-210ENST00000532935 REEP4Q9H6H4 257 aa14.12□□□□□ -0.15
CPSF1-210ENST00000532935 ZNF395Q9H8N7 513 aaPredicted RBP14.12□□□□□ -0.15
CPSF1-210ENST00000532935 ZFP64Q9NPA5 681 aa14.12□□□□□ -0.15
CPSF1-210ENST00000532935 SUCOQ9UBS9 1254 aaKnown RBP14.12□□□□□ -0.15
CPSF1-210ENST00000532935 PLEKHB1Q9UF11 243 aaPredicted RBP14.12□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 62.1 ms