RNA–Protein interactions for RNA: ENST00000532550.1

PHRF1-204, Transcript of PHD and ring finger domains 1, humanhuman

TSL 3

Gene PHRF1, Length 748 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHRF1-204ENST00000532550 ERP27Q96DN0 273 aa15.82■□□□□ 0.12
PHRF1-204ENST00000532550 ZNF597Q96LX8 424 aa15.82■□□□□ 0.12
PHRF1-204ENST00000532550 BBS4Q96RK4 519 aa15.82■□□□□ 0.12
PHRF1-204ENST00000532550 ITPAQ9BY32 194 aa15.82■□□□□ 0.12
PHRF1-204ENST00000532550 ANGPTL4Q9BY76 406 aa15.82■□□□□ 0.12
PHRF1-204ENST00000532550 PNPLA3Q9NST1 481 aa15.82■□□□□ 0.12
PHRF1-204ENST00000532550 QPCTLQ9NXS2 382 aa15.82■□□□□ 0.12
PHRF1-204ENST00000532550 EHD3Q9NZN3 535 aa15.82■□□□□ 0.12
PHRF1-204ENST00000532550 WBP11Q9Y2W2 641 aaKnown RBP15.82■□□□□ 0.12
PHRF1-204ENST00000532550 FIGNL2A6NMB9 653 aa15.81■□□□□ 0.12
PHRF1-204ENST00000532550 ACOX3O15254 700 aa15.81■□□□□ 0.12
PHRF1-204ENST00000532550 TRIM3O75382 744 aaPredicted RBP15.81■□□□□ 0.12
PHRF1-204ENST00000532550 SEC22BO75396 215 aa15.81■□□□□ 0.12
PHRF1-204ENST00000532550 PPM1BO75688 479 aa15.81■□□□□ 0.12
PHRF1-204ENST00000532550 ABCB1P08183 1280 aaPredicted RBP15.81■□□□□ 0.12
PHRF1-204ENST00000532550 COX6B1P14854 86 aa15.81■□□□□ 0.12
PHRF1-204ENST00000532550 DDCP20711 480 aa15.81■□□□□ 0.12
PHRF1-204ENST00000532550 DRD5P21918 477 aa15.81■□□□□ 0.12
PHRF1-204ENST00000532550 SOX18P35713 384 aa15.81■□□□□ 0.12
PHRF1-204ENST00000532550 CASP3P42574 277 aa15.81■□□□□ 0.12
PHRF1-204ENST00000532550 PPICP45877 212 aa15.81■□□□□ 0.12
PHRF1-204ENST00000532550 MASP1P48740 699 aa15.81■□□□□ 0.12
PHRF1-204ENST00000532550 PMPCAQ10713 525 aa15.81■□□□□ 0.12
PHRF1-204ENST00000532550 DUSP8Q13202 625 aa15.81■□□□□ 0.12
PHRF1-204ENST00000532550 CDSNQ15517 529 aa15.81■□□□□ 0.12
PHRF1-204ENST00000532550 NNATQ16517 81 aa15.81■□□□□ 0.12
PHRF1-204ENST00000532550 ERCC6LQ2NKX8 1250 aa15.81■□□□□ 0.12
PHRF1-204ENST00000532550 ZNF628Q5EBL2 1059 aa15.81■□□□□ 0.12
PHRF1-204ENST00000532550 WLSQ5T9L3 541 aa15.81■□□□□ 0.12
PHRF1-204ENST00000532550 WDR93Q6P2C0 686 aa15.81■□□□□ 0.12
PHRF1-204ENST00000532550 ACAD11Q709F0 780 aa15.81■□□□□ 0.12
PHRF1-204ENST00000532550 TRABD2AQ86V40 505 aa15.81■□□□□ 0.12
PHRF1-204ENST00000532550 HOMEZQ8IX15 550 aa15.81■□□□□ 0.12
PHRF1-204ENST00000532550 SRRM1Q8IYB3 904 aaKnown RBP15.81■□□□□ 0.12
PHRF1-204ENST00000532550 LIX1Q8N485 282 aa15.81■□□□□ 0.12
PHRF1-204ENST00000532550 BANPQ8N9N5 519 aa15.81■□□□□ 0.12
PHRF1-204ENST00000532550 ASB5Q8WWX0 329 aa15.81■□□□□ 0.12
PHRF1-204ENST00000532550 CREBBPQ92793 2442 aa15.81■□□□□ 0.12
PHRF1-204ENST00000532550 KAT2AQ92830 837 aa15.81■□□□□ 0.12
PHRF1-204ENST00000532550 APOPT1Q96IL0 206 aa15.81■□□□□ 0.12
PHRF1-204ENST00000532550 RILPQ96NA2 401 aa15.81■□□□□ 0.12
PHRF1-204ENST00000532550 TRMOQ9BU70 441 aa15.81■□□□□ 0.12
PHRF1-204ENST00000532550 GATA5Q9BWX5 397 aaPredicted RBP15.81■□□□□ 0.12
PHRF1-204ENST00000532550 ZNF703Q9H7S9 590 aaPredicted RBP15.81■□□□□ 0.12
PHRF1-204ENST00000532550 ACKR4Q9NPB9 350 aa15.81■□□□□ 0.12
PHRF1-204ENST00000532550 MIEF1Q9NQG6 463 aa15.81■□□□□ 0.12
PHRF1-204ENST00000532550 ALKBH4Q9NXW9 302 aa15.81■□□□□ 0.12
PHRF1-204ENST00000532550 SENP1Q9P0U3 644 aa15.81■□□□□ 0.12
PHRF1-204ENST00000532550 TNFRSF10DQ9UBN6 386 aa15.81■□□□□ 0.12
PHRF1-204ENST00000532550 POLR3HQ9Y535 204 aaPredicted RBP15.81■□□□□ 0.12
PHRF1-204ENST00000532550 PHF3Q92576 2039 aaKnown RBP15.8■□□□□ 0.12
PHRF1-204ENST00000532550 LRRC3CA6NJW4 275 aa15.8■□□□□ 0.12
PHRF1-204ENST00000532550 SLC28A1O00337 649 aa15.8■□□□□ 0.12
PHRF1-204ENST00000532550 AZIN1O14977 448 aa15.8■□□□□ 0.12
PHRF1-204ENST00000532550 RGS14O43566 566 aa15.8■□□□□ 0.12
PHRF1-204ENST00000532550 TRAPPC6AO75865 159 aa15.8■□□□□ 0.12
PHRF1-204ENST00000532550 RSL1D1O76021 490 aaKnown RBP15.8■□□□□ 0.12
PHRF1-204ENST00000532550 CHEK2O96017 543 aa15.8■□□□□ 0.12
PHRF1-204ENST00000532550 ACVR2AP27037 513 aa15.8■□□□□ 0.12
PHRF1-204ENST00000532550 GDF1P27539 372 aa15.8■□□□□ 0.12
PHRF1-204ENST00000532550 EMDP50402 254 aa15.8■□□□□ 0.12
PHRF1-204ENST00000532550 PLCXD2Q0VAA5 305 aa15.8■□□□□ 0.12
PHRF1-204ENST00000532550 PCLAFQ15004 111 aa15.8■□□□□ 0.12
PHRF1-204ENST00000532550 CEBPEQ15744 281 aa15.8■□□□□ 0.12
PHRF1-204ENST00000532550 BICRALQ6AI39 1079 aa15.8■□□□□ 0.12
PHRF1-204ENST00000532550 CLEC6AQ6EIG7 209 aa15.8■□□□□ 0.12
PHRF1-204ENST00000532550 NOXRED1Q6NXP6 359 aa15.8■□□□□ 0.12
PHRF1-204ENST00000532550 TICAM1Q8IUC6 712 aa15.8■□□□□ 0.12
PHRF1-204ENST00000532550 FAM9CQ8IZT9 166 aa15.8■□□□□ 0.12
PHRF1-204ENST00000532550 MARVELD2Q8N4S9 558 aa15.8■□□□□ 0.12
PHRF1-204ENST00000532550 OR9A2Q8NGT5 310 aa15.8■□□□□ 0.12
PHRF1-204ENST00000532550 AENQ8WTP8 325 aaKnown RBP15.8■□□□□ 0.12
PHRF1-204ENST00000532550 OMA1Q96E52 524 aa15.8■□□□□ 0.12
PHRF1-204ENST00000532550 METTL2AQ96IZ6 378 aaKnown RBP15.8■□□□□ 0.12
PHRF1-204ENST00000532550 METTL7AQ9H8H3 244 aa15.8■□□□□ 0.12
PHRF1-204ENST00000532550 TNFRSF12AQ9NP84 129 aa15.8■□□□□ 0.12
PHRF1-204ENST00000532550 MKS1Q9NXB0 559 aa15.8■□□□□ 0.12
PHRF1-204ENST00000532550 LGALS13Q9UHV8 139 aa15.8■□□□□ 0.12
PHRF1-204ENST00000532550 GPR55Q9Y2T6 319 aaPredicted RBP15.8■□□□□ 0.12
PHRF1-204ENST00000532550 FIS1Q9Y3D6 152 aa15.8■□□□□ 0.12
PHRF1-204ENST00000532550 NCKAP5O14513 1909 aa15.8■□□□□ 0.12
PHRF1-204ENST00000532550 SPAG7O75391 227 aa15.79■□□□□ 0.12
PHRF1-204ENST00000532550 SNRPB2P08579 225 aaKnown RBP15.79■□□□□ 0.12
PHRF1-204ENST00000532550 FAM71E1Q6IPT2 247 aa15.79■□□□□ 0.12
PHRF1-204ENST00000532550 MCEMP1Q8IX19 187 aa15.79■□□□□ 0.12
PHRF1-204ENST00000532550 OR10Q1Q8NGQ4 319 aa15.79■□□□□ 0.12
PHRF1-204ENST00000532550 NEIL3Q8TAT5 605 aa15.79■□□□□ 0.12
PHRF1-204ENST00000532550 GNRHR2Q96P88 292 aa15.79■□□□□ 0.12
PHRF1-204ENST00000532550 FAM111AQ96PZ2 611 aa15.79■□□□□ 0.12
PHRF1-204ENST00000532550 STMN4Q9H169 189 aaPredicted RBP15.79■□□□□ 0.12
PHRF1-204ENST00000532550 ANKRA2Q9H9E1 313 aa15.79■□□□□ 0.12
PHRF1-204ENST00000532550 MYNNQ9NPC7 610 aa15.79■□□□□ 0.12
PHRF1-204ENST00000532550 TAS2R9Q9NYW1 312 aa15.79■□□□□ 0.12
PHRF1-204ENST00000532550 TAS2R7Q9NYW3 318 aa15.79■□□□□ 0.12
PHRF1-204ENST00000532550 NOL12Q9UGY1 213 aaKnown RBP eCLIP15.79■□□□□ 0.12
PHRF1-204ENST00000532550 RNF6Q9Y252 685 aa15.79■□□□□ 0.12
PHRF1-204ENST00000532550 V9GYY5 206 aaPredicted RBP15.79■□□□□ 0.12
PHRF1-204ENST00000532550 FRG2CA6NGY1 282 aa15.78■□□□□ 0.12
PHRF1-204ENST00000532550 MYO1GB0I1T2 1018 aa15.78■□□□□ 0.12
PHRF1-204ENST00000532550 TO15178 435 aa15.78■□□□□ 0.12
Retrieved 100 of 20,778 RNA–protein pairs in 64.8 ms