RNA–Protein interactions for RNA: ENST00000531995.1

PUF60-218, Transcript of poly(U) binding splicing factor 60, humanhuman

TSL 3

Gene PUF60, Length 631 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PUF60-218ENST00000531995 FGFR1OP2Q9NVK5 253 aa17.22■□□□□ 0.35
PUF60-218ENST00000531995 SH3BP4Q9P0V3 963 aa17.22■□□□□ 0.35
PUF60-218ENST00000531995 SUCOQ9UBS9 1254 aaKnown RBP17.22■□□□□ 0.35
PUF60-218ENST00000531995 CELSR1Q9NYQ6 3014 aa17.22■□□□□ 0.35
PUF60-218ENST00000531995 CCL21O00585 134 aa17.21■□□□□ 0.35
PUF60-218ENST00000531995 WISP2O76076 250 aa17.21■□□□□ 0.35
PUF60-218ENST00000531995 CBX7O95931 251 aa17.21■□□□□ 0.35
PUF60-218ENST00000531995 CRYABP02511 175 aaKnown RBP17.21■□□□□ 0.35
PUF60-218ENST00000531995 PCSK2P16519 638 aa17.21■□□□□ 0.35
PUF60-218ENST00000531995 WNT3P56703 355 aa17.21■□□□□ 0.35
PUF60-218ENST00000531995 UFM1P61960 85 aa17.21■□□□□ 0.35
PUF60-218ENST00000531995 PHC1P78364 1004 aa17.21■□□□□ 0.35
PUF60-218ENST00000531995 ZNF766Q5HY98 468 aa17.21■□□□□ 0.35
PUF60-218ENST00000531995 SP5Q6BEB4 398 aaPredicted RBP17.21■□□□□ 0.35
PUF60-218ENST00000531995 ZNF551Q7Z340 670 aaPredicted RBP17.21■□□□□ 0.35
PUF60-218ENST00000531995 CAMKMTQ7Z624 323 aa17.21■□□□□ 0.35
PUF60-218ENST00000531995 GALNT12Q8IXK2 581 aa17.21■□□□□ 0.35
PUF60-218ENST00000531995 C9orf40Q8IXQ3 194 aa17.21■□□□□ 0.35
PUF60-218ENST00000531995 SAMD14Q8IZD0 417 aaPredicted RBP17.21■□□□□ 0.35
PUF60-218ENST00000531995 ZNF675Q8TD23 568 aa17.21■□□□□ 0.35
PUF60-218ENST00000531995 STON2Q8WXE9 905 aa17.21■□□□□ 0.35
PUF60-218ENST00000531995 KAT2AQ92830 837 aa17.21■□□□□ 0.35
PUF60-218ENST00000531995 MARK4Q96L34 752 aa17.21■□□□□ 0.35
PUF60-218ENST00000531995 BBS4Q96RK4 519 aa17.21■□□□□ 0.35
PUF60-218ENST00000531995 CCDC28BQ9BUN5 200 aa17.21■□□□□ 0.35
PUF60-218ENST00000531995 CNPPD1Q9BV87 410 aa17.21■□□□□ 0.35
PUF60-218ENST00000531995 HES7Q9BYE0 225 aa17.21■□□□□ 0.35
PUF60-218ENST00000531995 BRINP2Q9C0B6 783 aa17.21■□□□□ 0.35
PUF60-218ENST00000531995 TSPAN10Q9H1Z9 355 aaPredicted RBP17.21■□□□□ 0.35
PUF60-218ENST00000531995 CDCP1Q9H5V8 836 aa17.21■□□□□ 0.35
PUF60-218ENST00000531995 ANKRA2Q9H9E1 313 aa17.21■□□□□ 0.35
PUF60-218ENST00000531995 NPHS2Q9NP85 383 aa17.21■□□□□ 0.35
PUF60-218ENST00000531995 KLHL1Q9NR64 748 aa17.21■□□□□ 0.35
PUF60-218ENST00000531995 TEKT2Q9UIF3 430 aa17.21■□□□□ 0.35
PUF60-218ENST00000531995 ERVK-11Q9UQG0 969 aa17.21■□□□□ 0.35
PUF60-218ENST00000531995 PCNX1Q96RV3 2341 aa17.21■□□□□ 0.35
PUF60-218ENST00000531995 TACC2O95359 2948 aa17.2■□□□□ 0.34
PUF60-218ENST00000531995 PDZD2O15018 2839 aa17.2■□□□□ 0.34
PUF60-218ENST00000531995 ZNF354AO60765 605 aaPredicted RBP17.2■□□□□ 0.34
PUF60-218ENST00000531995 ZFAND5O76080 213 aa17.2■□□□□ 0.34
PUF60-218ENST00000531995 SNRPB2P08579 225 aaKnown RBP17.2■□□□□ 0.34
PUF60-218ENST00000531995 VIMP08670 466 aaKnown RBP17.2■□□□□ 0.34
PUF60-218ENST00000531995 MPIP34949 423 aa17.2■□□□□ 0.34
PUF60-218ENST00000531995 ZFP36L2P47974 494 aaKnown RBP17.2■□□□□ 0.34
PUF60-218ENST00000531995 NME5P56597 212 aa17.2■□□□□ 0.34
PUF60-218ENST00000531995 MLF1P58340 268 aa17.2■□□□□ 0.34
PUF60-218ENST00000531995 RNF4P78317 190 aa17.2■□□□□ 0.34
PUF60-218ENST00000531995 MRPS35P82673 323 aaKnown RBP17.2■□□□□ 0.34
PUF60-218ENST00000531995 ACER2Q5QJU3 275 aa17.2■□□□□ 0.34
PUF60-218ENST00000531995 R3HCC1LQ7Z5L2 792 aaKnown RBP17.2■□□□□ 0.34
PUF60-218ENST00000531995 RPS19BP1Q86WX3 136 aaKnown RBP17.2■□□□□ 0.34
PUF60-218ENST00000531995 OR7G2Q8NG99 324 aa17.2■□□□□ 0.34
PUF60-218ENST00000531995 OR8K3Q8NH51 312 aa17.2■□□□□ 0.34
PUF60-218ENST00000531995 SIGLEC12Q96PQ1 595 aa17.2■□□□□ 0.34
PUF60-218ENST00000531995 DEFB126Q9BYW3 111 aa17.2■□□□□ 0.34
PUF60-218ENST00000531995 TCF7L2Q9NQB0 619 aa17.2■□□□□ 0.34
PUF60-218ENST00000531995 STMN3Q9NZ72 180 aa17.2■□□□□ 0.34
PUF60-218ENST00000531995 DCTN4Q9UJW0 460 aa17.2■□□□□ 0.34
PUF60-218ENST00000531995 NCOA6Q14686 2063 aaPredicted RBP17.19■□□□□ 0.34
PUF60-218ENST00000531995 CACNA1CQ13936 2221 aa17.19■□□□□ 0.34
PUF60-218ENST00000531995 ADGRG4Q8IZF6 3080 aa17.19■□□□□ 0.34
PUF60-218ENST00000531995 PDPK1O15530 556 aa17.19■□□□□ 0.34
PUF60-218ENST00000531995 SCN2BO60939 215 aa17.19■□□□□ 0.34
PUF60-218ENST00000531995 EFNA1P20827 205 aaPredicted RBP17.19■□□□□ 0.34
PUF60-218ENST00000531995 HPCAL1P37235 193 aa17.19■□□□□ 0.34
PUF60-218ENST00000531995 CA7P43166 264 aa17.19■□□□□ 0.34
PUF60-218ENST00000531995 NCBP2P52298 156 aaKnown RBP eCLIP17.19■□□□□ 0.34
PUF60-218ENST00000531995 EXOSC7Q15024 291 aaKnown RBP17.19■□□□□ 0.34
PUF60-218ENST00000531995 CPTPQ5TA50 214 aa17.19■□□□□ 0.34
PUF60-218ENST00000531995 HSDL2Q6YN16 418 aa17.19■□□□□ 0.34
PUF60-218ENST00000531995 MRGPRGQ86SM5 289 aa17.19■□□□□ 0.34
PUF60-218ENST00000531995 VWA5B2Q8N398 1253 aa17.19■□□□□ 0.34
PUF60-218ENST00000531995 OR7G1Q8NGA0 311 aa17.19■□□□□ 0.34
PUF60-218ENST00000531995 THAP3Q8WTV1 239 aaPredicted RBP17.19■□□□□ 0.34
PUF60-218ENST00000531995 ART5Q96L15 291 aa17.19■□□□□ 0.34
PUF60-218ENST00000531995 ZNF354BQ96LW1 612 aa17.19■□□□□ 0.34
PUF60-218ENST00000531995 DPY30Q9C005 99 aa17.19■□□□□ 0.34
PUF60-218ENST00000531995 OR10A5Q9H207 317 aa17.19■□□□□ 0.34
PUF60-218ENST00000531995 SDR39U1Q9NRG7 319 aaPredicted RBP17.19■□□□□ 0.34
PUF60-218ENST00000531995 ACSS1Q9NUB1 689 aaPredicted RBP17.19■□□□□ 0.34
PUF60-218ENST00000531995 GIMAP4Q9NUV9 329 aa17.19■□□□□ 0.34
PUF60-218ENST00000531995 TINAGQ9UJW2 476 aa17.19■□□□□ 0.34
PUF60-218ENST00000531995 PKDREJQ9NTG1 2253 aa17.18■□□□□ 0.34
PUF60-218ENST00000531995 PLOD2O00469 737 aa17.18■□□□□ 0.34
PUF60-218ENST00000531995 UBDO15205 165 aa17.18■□□□□ 0.34
PUF60-218ENST00000531995 DYRK3O43781 588 aa17.18■□□□□ 0.34
PUF60-218ENST00000531995 PLOD3O60568 738 aa17.18■□□□□ 0.34
PUF60-218ENST00000531995 NME6O75414 186 aaPredicted RBP17.18■□□□□ 0.34
PUF60-218ENST00000531995 RPL3P39023 403 aaKnown RBP17.18■□□□□ 0.34
PUF60-218ENST00000531995 MRPL19P49406 292 aaKnown RBP17.18■□□□□ 0.34
PUF60-218ENST00000531995 EMDP50402 254 aa17.18■□□□□ 0.34
PUF60-218ENST00000531995 CDK9P50750 372 aaKnown RBP17.18■□□□□ 0.34
PUF60-218ENST00000531995 TUBA3CQ13748 450 aa17.18■□□□□ 0.34
PUF60-218ENST00000531995 MLC1Q15049 377 aa17.18■□□□□ 0.34
PUF60-218ENST00000531995 EBPQ15125 230 aaKnown RBP17.18■□□□□ 0.34
PUF60-218ENST00000531995 GSTA3Q16772 222 aa17.18■□□□□ 0.34
PUF60-218ENST00000531995 PDCD4Q53EL6 469 aaKnown RBP17.18■□□□□ 0.34
PUF60-218ENST00000531995 ZNF468Q5VIY5 522 aaPredicted RBP17.18■□□□□ 0.34
PUF60-218ENST00000531995 TUBA3EQ6PEY2 450 aa17.18■□□□□ 0.34
PUF60-218ENST00000531995 ACAD11Q709F0 780 aa17.18■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 22.9 ms