RNA–Protein interactions for RNA: ENST00000531405.5

SSSCA1-206, Transcript of Sjogren syndrome/scleroderma autoantigen 1, humanhuman

TSL 2 BASIC

Gene SSSCA1, Length 879 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSSCA1-206ENST00000531405 MGAT2Q10469 447 aa16.78■□□□□ 0.28
SSSCA1-206ENST00000531405 RCAN2Q14206 197 aa16.78■□□□□ 0.28
SSSCA1-206ENST00000531405 PRICKLE4Q2TBC4 344 aa16.78■□□□□ 0.28
SSSCA1-206ENST00000531405 SGO1Q5FBB7 561 aa16.78■□□□□ 0.28
SSSCA1-206ENST00000531405 UBAP2Q5T6F2 1119 aaKnown RBP16.78■□□□□ 0.28
SSSCA1-206ENST00000531405 FRG2Q64ET8 278 aa16.78■□□□□ 0.28
SSSCA1-206ENST00000531405 TTC19Q6DKK2 380 aaPredicted RBP16.78■□□□□ 0.28
SSSCA1-206ENST00000531405 FAM180BQ6P0A1 224 aa16.78■□□□□ 0.28
SSSCA1-206ENST00000531405 CCDC91Q7Z6B0 441 aa16.78■□□□□ 0.28
SSSCA1-206ENST00000531405 ADCY4Q8NFM4 1077 aa16.78■□□□□ 0.28
SSSCA1-206ENST00000531405 RDH11Q8TC12 318 aa16.78■□□□□ 0.28
SSSCA1-206ENST00000531405 SLC44A1Q8WWI5 657 aa16.78■□□□□ 0.28
SSSCA1-206ENST00000531405 OMA1Q96E52 524 aa16.78■□□□□ 0.28
SSSCA1-206ENST00000531405 FRG2BQ96QU4 278 aa16.78■□□□□ 0.28
SSSCA1-206ENST00000531405 SMR3AQ99954 134 aa16.78■□□□□ 0.28
SSSCA1-206ENST00000531405 YIPF4Q9BSR8 244 aa16.78■□□□□ 0.28
SSSCA1-206ENST00000531405 OSBPL11Q9BXB4 747 aa16.78■□□□□ 0.28
SSSCA1-206ENST00000531405 VPS11Q9H270 941 aa16.78■□□□□ 0.28
SSSCA1-206ENST00000531405 SERHLQ9NQF3 203 aa16.78■□□□□ 0.28
SSSCA1-206ENST00000531405 MAT2BQ9NZL9 334 aa16.78■□□□□ 0.28
SSSCA1-206ENST00000531405 CCDC189A1A4V9 331 aa16.77■□□□□ 0.28
SSSCA1-206ENST00000531405 SNPHO15079 494 aa16.77■□□□□ 0.28
SSSCA1-206ENST00000531405 ICOSLGO75144 302 aa16.77■□□□□ 0.28
SSSCA1-206ENST00000531405 ERAL1O75616 437 aaKnown RBP16.77■□□□□ 0.28
SSSCA1-206ENST00000531405 CYP4B1P13584 511 aa16.77■□□□□ 0.28
SSSCA1-206ENST00000531405 DRD2P14416 443 aa16.77■□□□□ 0.28
SSSCA1-206ENST00000531405 FOSL1P15407 271 aa16.77■□□□□ 0.28
SSSCA1-206ENST00000531405 TYK2P29597 1187 aa16.77■□□□□ 0.28
SSSCA1-206ENST00000531405 SERPINB8P50452 374 aa16.77■□□□□ 0.28
SSSCA1-206ENST00000531405 MAPK12P53778 367 aa16.77■□□□□ 0.28
SSSCA1-206ENST00000531405 TRAF3Q13114 568 aa16.77■□□□□ 0.28
SSSCA1-206ENST00000531405 Q71RC1 249 aaPredicted RBP16.77■□□□□ 0.28
SSSCA1-206ENST00000531405 RPS27LQ71UM5 84 aaKnown RBP16.77■□□□□ 0.28
SSSCA1-206ENST00000531405 LUZP2Q86TE4 346 aa16.77■□□□□ 0.28
SSSCA1-206ENST00000531405 ZPLD1Q8TCW7 415 aa16.77■□□□□ 0.28
SSSCA1-206ENST00000531405 RBM24Q9BX46 236 aaKnown RBP16.77■□□□□ 0.28
SSSCA1-206ENST00000531405 RAB17Q9H0T7 212 aa16.77■□□□□ 0.28
SSSCA1-206ENST00000531405 ZBTB26Q9HCK0 441 aa16.77■□□□□ 0.28
SSSCA1-206ENST00000531405 FARSBQ9NSD9 589 aaKnown RBP16.77■□□□□ 0.28
SSSCA1-206ENST00000531405 GALNT8Q9NY28 637 aa16.77■□□□□ 0.28
SSSCA1-206ENST00000531405 KLRF1Q9NZS2 232 aa16.77■□□□□ 0.28
SSSCA1-206ENST00000531405 ADAM29Q9UKF5 820 aa16.77■□□□□ 0.28
SSSCA1-206ENST00000531405 PCTPQ9UKL6 214 aa16.77■□□□□ 0.28
SSSCA1-206ENST00000531405 CES1P1Q9UKY3 287 aa16.77■□□□□ 0.28
SSSCA1-206ENST00000531405 PLLPQ9Y342 182 aa16.77■□□□□ 0.28
SSSCA1-206ENST00000531405 PCDHA9Q9Y5H5 950 aa16.77■□□□□ 0.28
SSSCA1-206ENST00000531405 A0A1B0GTL3 188 aa16.76■□□□□ 0.27
SSSCA1-206ENST00000531405 A0A1W2PPR1 153 aa16.76■□□□□ 0.27
SSSCA1-206ENST00000531405 ESYT3A0FGR9 886 aa16.76■□□□□ 0.27
SSSCA1-206ENST00000531405 H0Y3Z8 333 aa16.76■□□□□ 0.27
SSSCA1-206ENST00000531405 UGT2B11O75310 529 aa16.76■□□□□ 0.27
SSSCA1-206ENST00000531405 ERN1O75460 977 aaKnown RBP16.76■□□□□ 0.27
SSSCA1-206ENST00000531405 IL18BPO95998 194 aa16.76■□□□□ 0.27
SSSCA1-206ENST00000531405 ACTL6AO96019 429 aa16.76■□□□□ 0.27
SSSCA1-206ENST00000531405 PLCXD2Q0VAA5 305 aa16.76■□□□□ 0.27
SSSCA1-206ENST00000531405 LTB4RQ15722 352 aa16.76■□□□□ 0.27
SSSCA1-206ENST00000531405 SLC30A6Q6NXT4 461 aa16.76■□□□□ 0.27
SSSCA1-206ENST00000531405 SLC48A1Q6P1K1 146 aa16.76■□□□□ 0.27
SSSCA1-206ENST00000531405 METTL2BQ6P1Q9 378 aaKnown RBP16.76■□□□□ 0.27
SSSCA1-206ENST00000531405 PAGE2Q7Z2X7 111 aa16.76■□□□□ 0.27
SSSCA1-206ENST00000531405 NUP54Q7Z3B4 507 aa16.76■□□□□ 0.27
SSSCA1-206ENST00000531405 COMMD6Q7Z4G1 85 aa16.76■□□□□ 0.27
SSSCA1-206ENST00000531405 GCNT2Q8N0V5 402 aa16.76■□□□□ 0.27
SSSCA1-206ENST00000531405 METTL4Q8N3J2 472 aa16.76■□□□□ 0.27
SSSCA1-206ENST00000531405 OR14L1PQ8NHC6 308 aa16.76■□□□□ 0.27
SSSCA1-206ENST00000531405 LCORQ96JN0 433 aaPredicted RBP16.76■□□□□ 0.27
SSSCA1-206ENST00000531405 NTMT1Q9BV86 223 aa16.76■□□□□ 0.27
SSSCA1-206ENST00000531405 AHSPQ9NZD4 102 aa16.76■□□□□ 0.27
SSSCA1-206ENST00000531405 FETUBQ9UGM5 382 aa16.76■□□□□ 0.27
SSSCA1-206ENST00000531405 SLC12A4Q9UP95 1085 aa16.76■□□□□ 0.27
SSSCA1-206ENST00000531405 DNHD1Q96M86 4753 aa16.76■□□□□ 0.27
SSSCA1-206ENST00000531405 GOLGA6L10A6NI86 522 aa16.75■□□□□ 0.27
SSSCA1-206ENST00000531405 CDH16O75309 829 aa16.75■□□□□ 0.27
SSSCA1-206ENST00000531405 CBX7O95931 251 aa16.75■□□□□ 0.27
SSSCA1-206ENST00000531405 HRGP04196 525 aa16.75■□□□□ 0.27
SSSCA1-206ENST00000531405 ATP1B1P05026 303 aa16.75■□□□□ 0.27
SSSCA1-206ENST00000531405 CPN1P15169 458 aa16.75■□□□□ 0.27
SSSCA1-206ENST00000531405 NAGAP17050 411 aa16.75■□□□□ 0.27
SSSCA1-206ENST00000531405 DEKP35659 375 aaKnown RBP16.75■□□□□ 0.27
SSSCA1-206ENST00000531405 STARP49675 285 aa16.75■□□□□ 0.27
SSSCA1-206ENST00000531405 DCAF7P61962 342 aa16.75■□□□□ 0.27
SSSCA1-206ENST00000531405 MAP4K2Q12851 820 aa16.75■□□□□ 0.27
SSSCA1-206ENST00000531405 IFT88Q13099 833 aa16.75■□□□□ 0.27
SSSCA1-206ENST00000531405 TRMT12Q53H54 448 aaKnown RBP16.75■□□□□ 0.27
SSSCA1-206ENST00000531405 TMEM81Q6P7N7 255 aa16.75■□□□□ 0.27
SSSCA1-206ENST00000531405 TRIM42Q8IWZ5 723 aa16.75■□□□□ 0.27
SSSCA1-206ENST00000531405 WDSUB1Q8N9V3 476 aa16.75■□□□□ 0.27
SSSCA1-206ENST00000531405 OR4F6Q8NGB9 312 aa16.75■□□□□ 0.27
SSSCA1-206ENST00000531405 OR52R1Q8NGF1 315 aa16.75■□□□□ 0.27
SSSCA1-206ENST00000531405 INTS12Q96CB8 462 aaKnown RBP16.75■□□□□ 0.27
SSSCA1-206ENST00000531405 KLHL29Q96CT2 875 aa16.75■□□□□ 0.27
SSSCA1-206ENST00000531405 G6PC3Q9BUM1 346 aa16.75■□□□□ 0.27
SSSCA1-206ENST00000531405 ZNF639Q9UID6 485 aa16.75■□□□□ 0.27
SSSCA1-206ENST00000531405 TLN2Q9Y4G6 2542 aa16.74■□□□□ 0.27
SSSCA1-206ENST00000531405 DSCAMO60469 2012 aa16.74■□□□□ 0.27
SSSCA1-206ENST00000531405 C1orf226A1L170 272 aa16.74■□□□□ 0.27
SSSCA1-206ENST00000531405 PRAMEF25A6NGN4 478 aa16.74■□□□□ 0.27
SSSCA1-206ENST00000531405 PDYNP01213 254 aa16.74■□□□□ 0.27
SSSCA1-206ENST00000531405 RHOXF2BP0C7M4 288 aa16.74■□□□□ 0.27
SSSCA1-206ENST00000531405 CSNK2A2P19784 350 aaPredicted RBP16.74■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 44.6 ms