RNA–Protein interactions for RNA: ENST00000531110.5

CD44-231, Transcript of CD44 molecule (Indian blood group), humanhuman

TSL 3

Gene CD44, Length 749 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-231ENST00000531110 LNX1Q8TBB1 728 aaPredicted RBP5.29□□□□□ -1.56
CD44-231ENST00000531110 SFT2D1Q8WV19 159 aa5.29□□□□□ -1.56
CD44-231ENST00000531110 DCAKDQ8WVC6 231 aa5.29□□□□□ -1.56
CD44-231ENST00000531110 MAFIPQ8WZ33 124 aa5.29□□□□□ -1.56
CD44-231ENST00000531110 NSMAFQ92636 917 aa5.29□□□□□ -1.56
CD44-231ENST00000531110 CORO2AQ92828 525 aa5.29□□□□□ -1.56
CD44-231ENST00000531110 RBPMSQ93062 196 aaKnown RBP5.29□□□□□ -1.56
CD44-231ENST00000531110 P2RX5Q93086 422 aa5.29□□□□□ -1.56
CD44-231ENST00000531110 TOP1MTQ969P6 601 aa5.29□□□□□ -1.56
CD44-231ENST00000531110 TMEM203Q969S6 136 aa5.29□□□□□ -1.56
CD44-231ENST00000531110 TMCO6Q96DC7 493 aa5.29□□□□□ -1.56
CD44-231ENST00000531110 MASTLQ96GX5 879 aa5.29□□□□□ -1.56
CD44-231ENST00000531110 NODALQ96S42 347 aa5.29□□□□□ -1.56
CD44-231ENST00000531110 CYP2S1Q96SQ9 504 aa5.29□□□□□ -1.56
CD44-231ENST00000531110 KCNK16Q96T55 309 aa5.29□□□□□ -1.56
CD44-231ENST00000531110 MAPKAP1Q9BPZ7 522 aa5.29□□□□□ -1.56
CD44-231ENST00000531110 ACBD6Q9BR61 282 aa5.29□□□□□ -1.56
CD44-231ENST00000531110 ABHD14AQ9BUJ0 271 aa5.29□□□□□ -1.56
CD44-231ENST00000531110 CCDC32Q9BV29 185 aa5.29□□□□□ -1.56
CD44-231ENST00000531110 GANQ9H2C0 597 aa5.29□□□□□ -1.56
CD44-231ENST00000531110 ABHD16BQ9H3Z7 469 aa5.29□□□□□ -1.56
CD44-231ENST00000531110 RIMS4Q9H426 269 aaPredicted RBP5.29□□□□□ -1.56
CD44-231ENST00000531110 ANKRD19PQ9H560 264 aa5.29□□□□□ -1.56
CD44-231ENST00000531110 EXO5Q9H790 373 aa5.29□□□□□ -1.56
CD44-231ENST00000531110 LRRC4Q9HBW1 653 aa5.29□□□□□ -1.56
CD44-231ENST00000531110 ZFP14Q9HCL3 533 aa5.29□□□□□ -1.56
CD44-231ENST00000531110 TXNRD2Q9NNW7 524 aa5.29□□□□□ -1.56
CD44-231ENST00000531110 G6PC2Q9NQR9 355 aa5.29□□□□□ -1.56
CD44-231ENST00000531110 XPNPEP1Q9NQW7 623 aa5.29□□□□□ -1.56
CD44-231ENST00000531110 OLAHQ9NV23 265 aa5.29□□□□□ -1.56
CD44-231ENST00000531110 SDHAF2Q9NX18 166 aa5.29□□□□□ -1.56
CD44-231ENST00000531110 RBAKQ9NYW8 714 aaPredicted RBP5.29□□□□□ -1.56
CD44-231ENST00000531110 COPZ2Q9P299 210 aa5.29□□□□□ -1.56
CD44-231ENST00000531110 CLEC2DQ9UHP7 191 aa5.29□□□□□ -1.56
CD44-231ENST00000531110 SCP2D1Q9UJQ7 156 aa5.29□□□□□ -1.56
CD44-231ENST00000531110 ZNF229Q9UJW7 825 aa5.29□□□□□ -1.56
CD44-231ENST00000531110 INTS6Q9UL03 887 aaKnown RBP5.29□□□□□ -1.56
CD44-231ENST00000531110 PRPF19Q9UMS4 504 aaKnown RBP5.29□□□□□ -1.56
CD44-231ENST00000531110 AURKCQ9UQB9 309 aa5.29□□□□□ -1.56
CD44-231ENST00000531110 TRAPPC4Q9Y296 219 aa5.29□□□□□ -1.56
CD44-231ENST00000531110 KLHL20Q9Y2M5 609 aa5.29□□□□□ -1.56
CD44-231ENST00000531110 GPR52Q9Y2T5 361 aa5.29□□□□□ -1.56
CD44-231ENST00000531110 KDM6BO15054 1643 aa5.29□□□□□ -1.56
CD44-231ENST00000531110 MADDQ8WXG6 1647 aa5.29□□□□□ -1.56
CD44-231ENST00000531110 ATRNO75882 1429 aa5.29□□□□□ -1.56
CD44-231ENST00000531110 BICRAQ9NZM4 1560 aa5.29□□□□□ -1.56
CD44-231ENST00000531110 MYH3P11055 1940 aa5.29□□□□□ -1.56
CD44-231ENST00000531110 TMEM2Q9UHN6 1383 aa5.29□□□□□ -1.56
CD44-231ENST00000531110 SPHKAPQ2M3C7 1700 aa5.28□□□□□ -1.56
CD44-231ENST00000531110 ZFYVE16Q7Z3T8 1539 aa5.28□□□□□ -1.56
CD44-231ENST00000531110 ABCB11O95342 1321 aa5.28□□□□□ -1.56
CD44-231ENST00000531110 KIF13AQ9H1H9 1805 aa5.28□□□□□ -1.56
CD44-231ENST00000531110 A0A087X0M5 115 aa5.28□□□□□ -1.56
CD44-231ENST00000531110 A0A1B0GX30 115 aa5.28□□□□□ -1.56
CD44-231ENST00000531110 CCDC182A6NF36 153 aa5.28□□□□□ -1.56
CD44-231ENST00000531110 MYMKA6NI61 221 aa5.28□□□□□ -1.56
CD44-231ENST00000531110 RRN3P2A6NIE6 340 aa5.28□□□□□ -1.56
CD44-231ENST00000531110 A8MXK9 166 aa5.28□□□□□ -1.56
CD44-231ENST00000531110 KCNJ18B7U540 433 aa5.28□□□□□ -1.56
CD44-231ENST00000531110 E7ESA3 106 aa5.28□□□□□ -1.56
CD44-231ENST00000531110 G3V2T6 193 aa5.28□□□□□ -1.56
CD44-231ENST00000531110 EYA2O00167 538 aa5.28□□□□□ -1.56
CD44-231ENST00000531110 TLR4O00206 839 aa5.28□□□□□ -1.56
CD44-231ENST00000531110 UBE2CO00762 179 aa5.28□□□□□ -1.56
CD44-231ENST00000531110 RGS5O15539 181 aa5.28□□□□□ -1.56
CD44-231ENST00000531110 PSMD3O43242 534 aa5.28□□□□□ -1.56
CD44-231ENST00000531110 TLX3O43711 291 aaPredicted RBP5.28□□□□□ -1.56
CD44-231ENST00000531110 PLIN3O60664 434 aa5.28□□□□□ -1.56
CD44-231ENST00000531110 PNPP00491 289 aa5.28□□□□□ -1.56
CD44-231ENST00000531110 PGK1P00558 417 aa5.28□□□□□ -1.56
CD44-231ENST00000531110 CSTAP01040 98 aa5.28□□□□□ -1.56
CD44-231ENST00000531110 UMPSP11172 480 aa5.28□□□□□ -1.56
CD44-231ENST00000531110 CD1EP15812 388 aa5.28□□□□□ -1.56
CD44-231ENST00000531110 ST6GAL1P15907 406 aa5.28□□□□□ -1.56
CD44-231ENST00000531110 LBPP18428 481 aa5.28□□□□□ -1.56
CD44-231ENST00000531110 TNNI3P19429 210 aa5.28□□□□□ -1.56
CD44-231ENST00000531110 AOC1P19801 751 aa5.28□□□□□ -1.56
CD44-231ENST00000531110 OGNP20774 298 aaKnown RBP5.28□□□□□ -1.56
CD44-231ENST00000531110 IL11P20809 199 aa5.28□□□□□ -1.56
CD44-231ENST00000531110 NT5EP21589 574 aa5.28□□□□□ -1.56
CD44-231ENST00000531110 MYF6P23409 242 aa5.28□□□□□ -1.56
CD44-231ENST00000531110 IGFBP5P24593 272 aa5.28□□□□□ -1.56
CD44-231ENST00000531110 CHRNA3P32297 505 aa5.28□□□□□ -1.56
CD44-231ENST00000531110 PTGER1P34995 402 aa5.28□□□□□ -1.56
CD44-231ENST00000531110 SPRP35270 261 aaPredicted RBP5.28□□□□□ -1.56
CD44-231ENST00000531110 ARR3P36575 388 aa5.28□□□□□ -1.56
CD44-231ENST00000531110 NSFP46459 744 aaKnown RBP5.28□□□□□ -1.56
CD44-231ENST00000531110 RBP2P50120 134 aa5.28□□□□□ -1.56
CD44-231ENST00000531110 PRKAA2P54646 552 aa5.28□□□□□ -1.56
CD44-231ENST00000531110 ARSFP54793 590 aa5.28□□□□□ -1.56
CD44-231ENST00000531110 CDH8P55286 799 aa5.28□□□□□ -1.56
CD44-231ENST00000531110 NUTF2P61970 127 aaKnown RBP5.28□□□□□ -1.56
CD44-231ENST00000531110 SORDQ00796 357 aa5.28□□□□□ -1.56
CD44-231ENST00000531110 PRKCDQ05655 676 aa5.28□□□□□ -1.56
CD44-231ENST00000531110 PEX6Q13608 980 aa5.28□□□□□ -1.56
CD44-231ENST00000531110 PNLIPRP3Q17RR3 467 aa5.28□□□□□ -1.56
CD44-231ENST00000531110 MTHFSDQ2M296 383 aaKnown RBP5.28□□□□□ -1.56
CD44-231ENST00000531110 PCGF3Q3KNV8 242 aa5.28□□□□□ -1.56
CD44-231ENST00000531110 TMEM35AQ53FP2 167 aa5.28□□□□□ -1.56
CD44-231ENST00000531110 RNASE10Q5GAN6 216 aaKnown RBP5.28□□□□□ -1.56
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms