RNA–Protein interactions for RNA: ENST00000530893.6

BRCA2-204, Transcript of BRCA2, DNA repair associated, humanhuman

TSL 1 (best)

Gene BRCA2, Length 2,011 nt, Biotype processed transcript, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA2-204ENST00000530893 CHRM5P08912 532 aaPredicted RBP16.19■□□□□ 0.18
BRCA2-204ENST00000530893 TBC1D3HP0C7X1 549 aa16.19■□□□□ 0.18
BRCA2-204ENST00000530893 HOXB3P14651 431 aaPredicted RBP16.19■□□□□ 0.18
BRCA2-204ENST00000530893 TNNI3P19429 210 aa16.19■□□□□ 0.18
BRCA2-204ENST00000530893 IFNA8P32881 189 aa16.19■□□□□ 0.18
BRCA2-204ENST00000530893 DGKEP52429 567 aa16.19■□□□□ 0.18
BRCA2-204ENST00000530893 SMSP52788 366 aa16.19■□□□□ 0.18
BRCA2-204ENST00000530893 CDK5Q00535 292 aa16.19■□□□□ 0.18
BRCA2-204ENST00000530893 TJAP1Q5JTD0 557 aa16.19■□□□□ 0.18
BRCA2-204ENST00000530893 C18orf63Q68DL7 685 aa16.19■□□□□ 0.18
BRCA2-204ENST00000530893 TBC1D3GQ6DHY5 549 aa16.19■□□□□ 0.18
BRCA2-204ENST00000530893 TBC1D3CQ6IPX1 549 aa16.19■□□□□ 0.18
BRCA2-204ENST00000530893 NRROSQ86YC3 692 aa16.19■□□□□ 0.18
BRCA2-204ENST00000530893 SNX29P2Q8IUI4 249 aa16.19■□□□□ 0.18
BRCA2-204ENST00000530893 LYSMD2Q8IV50 215 aa16.19■□□□□ 0.18
BRCA2-204ENST00000530893 SAMD14Q8IZD0 417 aaPredicted RBP16.19■□□□□ 0.18
BRCA2-204ENST00000530893 TBC1D3Q8IZP1 549 aaPredicted RBP16.19■□□□□ 0.18
BRCA2-204ENST00000530893 SLC34A3Q8N130 599 aa16.19■□□□□ 0.18
BRCA2-204ENST00000530893 NANOGP1Q8N7R0 232 aa16.19■□□□□ 0.18
BRCA2-204ENST00000530893 NUP43Q8NFH3 380 aa16.19■□□□□ 0.18
BRCA2-204ENST00000530893 ELP4Q96EB1 424 aa16.19■□□□□ 0.18
BRCA2-204ENST00000530893 ZNF681Q96N22 645 aa16.19■□□□□ 0.18
BRCA2-204ENST00000530893 OR7D2Q96RA2 312 aa16.19■□□□□ 0.18
BRCA2-204ENST00000530893 MACROD1Q9BQ69 325 aa16.19■□□□□ 0.18
BRCA2-204ENST00000530893 TSSK6Q9BXA6 273 aa16.19■□□□□ 0.18
BRCA2-204ENST00000530893 FGF22Q9HCT0 170 aa16.19■□□□□ 0.18
BRCA2-204ENST00000530893 SCHIP1Q9P0W5 487 aaPredicted RBP16.19■□□□□ 0.18
BRCA2-204ENST00000530893 SEC14L4Q9UDX3 406 aa16.19■□□□□ 0.18
BRCA2-204ENST00000530893 APOBEC3BQ9UH17 382 aaKnown RBP16.19■□□□□ 0.18
BRCA2-204ENST00000530893 KLF15Q9UIH9 416 aa16.19■□□□□ 0.18
BRCA2-204ENST00000530893 SLC13A4Q9UKG4 626 aa16.19■□□□□ 0.18
BRCA2-204ENST00000530893 MDC1Q14676 2089 aaKnown RBP16.18■□□□□ 0.18
BRCA2-204ENST00000530893 TRANK1O15050 2925 aa16.18■□□□□ 0.18
BRCA2-204ENST00000530893 A0A075B6Q4 140 aa16.18■□□□□ 0.18
BRCA2-204ENST00000530893 GSAPA4D1B5 854 aa16.18■□□□□ 0.18
BRCA2-204ENST00000530893 DUXAA6NLW8 204 aa16.18■□□□□ 0.18
BRCA2-204ENST00000530893 SNTNA6NMZ2 147 aa16.18■□□□□ 0.18
BRCA2-204ENST00000530893 ISM1B1AKI9 464 aa16.18■□□□□ 0.18
BRCA2-204ENST00000530893 AGR2O95994 175 aa16.18■□□□□ 0.18
BRCA2-204ENST00000530893 LAMP2P13473 410 aa16.18■□□□□ 0.18
BRCA2-204ENST00000530893 PSMA1P25786 263 aaKnown RBP16.18■□□□□ 0.18
BRCA2-204ENST00000530893 SEC13P55735 322 aa16.18■□□□□ 0.18
BRCA2-204ENST00000530893 EFNB1P98172 346 aa16.18■□□□□ 0.18
BRCA2-204ENST00000530893 RGS1Q08116 209 aa16.18■□□□□ 0.18
BRCA2-204ENST00000530893 KRR1Q13601 381 aaKnown RBP16.18■□□□□ 0.18
BRCA2-204ENST00000530893 ATAD3BQ5T9A4 648 aa16.18■□□□□ 0.18
BRCA2-204ENST00000530893 PARM1Q6UWI2 310 aa16.18■□□□□ 0.18
BRCA2-204ENST00000530893 IQCHQ86VS3 1027 aa16.18■□□□□ 0.18
BRCA2-204ENST00000530893 PAQR7Q86WK9 346 aa16.18■□□□□ 0.18
BRCA2-204ENST00000530893 CYP4Z2PQ8N1L4 340 aa16.18■□□□□ 0.18
BRCA2-204ENST00000530893 LCN9Q8WX39 176 aa16.18■□□□□ 0.18
BRCA2-204ENST00000530893 FGF14Q92915 247 aa16.18■□□□□ 0.18
BRCA2-204ENST00000530893 SLC6A18Q96N87 628 aa16.18■□□□□ 0.18
BRCA2-204ENST00000530893 ARHGDIGQ99819 225 aa16.18■□□□□ 0.18
BRCA2-204ENST00000530893 IGFLR1Q9H665 355 aa16.18■□□□□ 0.18
BRCA2-204ENST00000530893 HHATLQ9HCP6 504 aa16.18■□□□□ 0.18
BRCA2-204ENST00000530893 PRDM9Q9NQV7 894 aa16.18■□□□□ 0.18
BRCA2-204ENST00000530893 TVP23BQ9NYZ1 205 aa16.18■□□□□ 0.18
BRCA2-204ENST00000530893 PCOLCE2Q9UKZ9 415 aa16.18■□□□□ 0.18
BRCA2-204ENST00000530893 DIMT1Q9UNQ2 313 aaKnown RBP16.18■□□□□ 0.18
BRCA2-204ENST00000530893 CSO75390 466 aaKnown RBP16.18■□□□□ 0.18
BRCA2-204ENST00000530893 SNX4O95219 450 aa16.18■□□□□ 0.18
BRCA2-204ENST00000530893 ALPPP05187 535 aa16.18■□□□□ 0.18
BRCA2-204ENST00000530893 NR2F6P10588 404 aa16.18■□□□□ 0.18
BRCA2-204ENST00000530893 EN2P19622 333 aaPredicted RBP16.18■□□□□ 0.18
BRCA2-204ENST00000530893 RAB8AP61006 207 aa16.18■□□□□ 0.18
BRCA2-204ENST00000530893 RPS3AP61247 264 aaKnown RBP16.18■□□□□ 0.18
BRCA2-204ENST00000530893 DUSP2Q05923 314 aa16.18■□□□□ 0.18
BRCA2-204ENST00000530893 MLLT11Q13015 90 aaPredicted RBP16.18■□□□□ 0.18
BRCA2-204ENST00000530893 GINS1Q14691 196 aa16.18■□□□□ 0.18
BRCA2-204ENST00000530893 INAVAQ3KP66 663 aa16.18■□□□□ 0.18
BRCA2-204ENST00000530893 SOWAHCQ53LP3 525 aaPredicted RBP16.18■□□□□ 0.18
BRCA2-204ENST00000530893 TMEM196Q5HYL7 178 aa16.18■□□□□ 0.18
BRCA2-204ENST00000530893 ZNF311Q5JNZ3 666 aa16.18■□□□□ 0.18
BRCA2-204ENST00000530893 SYCE2Q6PIF2 218 aa16.18■□□□□ 0.18
BRCA2-204ENST00000530893 SLC22A16Q86VW1 577 aa16.18■□□□□ 0.18
BRCA2-204ENST00000530893 OR9Q1Q8NGQ5 310 aa16.18■□□□□ 0.18
BRCA2-204ENST00000530893 NT5CQ8TCD5 201 aa16.18■□□□□ 0.18
BRCA2-204ENST00000530893 YIPF4Q9BSR8 244 aa16.18■□□□□ 0.18
BRCA2-204ENST00000530893 ACTRT3Q9BYD9 372 aa16.18■□□□□ 0.18
BRCA2-204ENST00000530893 PRRG3Q9BZD7 231 aa16.18■□□□□ 0.18
BRCA2-204ENST00000530893 SLC38A1Q9H2H9 487 aa16.18■□□□□ 0.18
BRCA2-204ENST00000530893 RNF167Q9H6Y7 350 aa16.18■□□□□ 0.18
BRCA2-204ENST00000530893 NTMQ9P121 344 aa16.18■□□□□ 0.18
BRCA2-204ENST00000530893 CRNNQ9UBG3 495 aaPredicted RBP16.18■□□□□ 0.18
BRCA2-204ENST00000530893 TLX2O43763 284 aaPredicted RBP16.17■□□□□ 0.18
BRCA2-204ENST00000530893 SNRNP200O75643 2136 aaKnown RBP16.17■□□□□ 0.18
BRCA2-204ENST00000530893 STATHP02808 62 aa16.17■□□□□ 0.18
BRCA2-204ENST00000530893 PRKAR1BP31321 381 aa16.17■□□□□ 0.18
BRCA2-204ENST00000530893 MC3RP41968 323 aa16.17■□□□□ 0.18
BRCA2-204ENST00000530893 DNASE1L3Q13609 305 aa16.17■□□□□ 0.18
BRCA2-204ENST00000530893 KLHL22Q53GT1 634 aa16.17■□□□□ 0.18
BRCA2-204ENST00000530893 SYT14P1Q58G82 188 aa16.17■□□□□ 0.18
BRCA2-204ENST00000530893 ATAT1Q5SQI0 421 aa16.17■□□□□ 0.18
BRCA2-204ENST00000530893 ANKRD54Q6NXT1 300 aa16.17■□□□□ 0.18
BRCA2-204ENST00000530893 MTSS1LQ765P7 747 aa16.17■□□□□ 0.18
BRCA2-204ENST00000530893 MRGPREQ86SM8 312 aa16.17■□□□□ 0.18
BRCA2-204ENST00000530893 PARP16Q8N5Y8 322 aa16.17■□□□□ 0.18
BRCA2-204ENST00000530893 GNPDA2Q8TDQ7 276 aa16.17■□□□□ 0.18
BRCA2-204ENST00000530893 C16orf58Q96GQ5 468 aa16.17■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms