RNA–Protein interactions for RNA: ENST00000530004.5

TTC39A-216, Transcript of tetratricopeptide repeat domain 39A, humanhuman

TSL 1 (best) BASIC

Gene TTC39A, Length 1,780 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TTC39A-216ENST00000530004 DSG2Q14126 1118 aa13.46□□□□□ -0.25
TTC39A-216ENST00000530004 ATP6AP1Q15904 470 aa13.46□□□□□ -0.25
TTC39A-216ENST00000530004 SFT2D3Q587I9 215 aa13.46□□□□□ -0.25
TTC39A-216ENST00000530004 ZNF628Q5EBL2 1059 aa13.46□□□□□ -0.25
TTC39A-216ENST00000530004 FAM111BQ6SJ93 734 aa13.46□□□□□ -0.25
TTC39A-216ENST00000530004 ZNF517Q6ZMY9 492 aaPredicted RBP13.46□□□□□ -0.25
TTC39A-216ENST00000530004 CCDC80Q76M96 950 aa13.46□□□□□ -0.25
TTC39A-216ENST00000530004 EIF3MQ7L2H7 374 aaKnown RBP13.46□□□□□ -0.25
TTC39A-216ENST00000530004 SLC44A2Q8IWA5 706 aaPredicted RBP13.46□□□□□ -0.25
TTC39A-216ENST00000530004 SLC30A8Q8IWU4 369 aa13.46□□□□□ -0.25
TTC39A-216ENST00000530004 ANKFN1Q8N957 763 aa13.46□□□□□ -0.25
TTC39A-216ENST00000530004 GALNT6Q8NCL4 622 aa13.46□□□□□ -0.25
TTC39A-216ENST00000530004 OR7G2Q8NG99 324 aa13.46□□□□□ -0.25
TTC39A-216ENST00000530004 OR51Q1Q8NH59 317 aa13.46□□□□□ -0.25
TTC39A-216ENST00000530004 SLC38A5Q8WUX1 472 aa13.46□□□□□ -0.25
TTC39A-216ENST00000530004 NXPE2Q96DL1 559 aa13.46□□□□□ -0.25
TTC39A-216ENST00000530004 CENPNQ96H22 339 aaPredicted RBP13.46□□□□□ -0.25
TTC39A-216ENST00000530004 YIPF4Q9BSR8 244 aa13.46□□□□□ -0.25
TTC39A-216ENST00000530004 AKIRIN1Q9H9L7 192 aaPredicted RBP13.46□□□□□ -0.25
TTC39A-216ENST00000530004 EQTNQ9NQ60 294 aa13.46□□□□□ -0.25
TTC39A-216ENST00000530004 SLC22A11Q9NSA0 550 aa13.46□□□□□ -0.25
TTC39A-216ENST00000530004 DDX18Q9NVP1 670 aaKnown RBP13.46□□□□□ -0.25
TTC39A-216ENST00000530004 THUMPD1Q9NXG2 353 aaKnown RBP13.46□□□□□ -0.25
TTC39A-216ENST00000530004 MSRB2Q9Y3D2 182 aa13.46□□□□□ -0.25
TTC39A-216ENST00000530004 LRRC42Q9Y546 428 aa13.46□□□□□ -0.25
TTC39A-216ENST00000530004 AK5Q9Y6K8 562 aa13.46□□□□□ -0.25
TTC39A-216ENST00000530004 BLACEA4D250 179 aa13.45□□□□□ -0.26
TTC39A-216ENST00000530004 C5orf58C9J3I9 102 aa13.45□□□□□ -0.26
TTC39A-216ENST00000530004 UPK1AO00322 258 aa13.45□□□□□ -0.26
TTC39A-216ENST00000530004 PLOD2O00469 737 aa13.45□□□□□ -0.26
TTC39A-216ENST00000530004 BRINP1O60477 761 aa13.45□□□□□ -0.26
TTC39A-216ENST00000530004 ONECUT2O95948 504 aa13.45□□□□□ -0.26
TTC39A-216ENST00000530004 ATXN8OSP0DMR3 200 aa13.45□□□□□ -0.26
TTC39A-216ENST00000530004 AGXTP21549 392 aa13.45□□□□□ -0.26
TTC39A-216ENST00000530004 MAGEA8P43361 318 aa13.45□□□□□ -0.26
TTC39A-216ENST00000530004 ANXA11P50995 505 aaKnown RBP13.45□□□□□ -0.26
TTC39A-216ENST00000530004 SLC13A2Q13183 592 aa13.45□□□□□ -0.26
TTC39A-216ENST00000530004 ERV3-1Q14264 604 aa13.45□□□□□ -0.26
TTC39A-216ENST00000530004 TAF11Q15544 211 aa13.45□□□□□ -0.26
TTC39A-216ENST00000530004 NKAIN1Q4KMZ8 207 aa13.45□□□□□ -0.26
TTC39A-216ENST00000530004 CYBRD1Q53TN4 286 aa13.45□□□□□ -0.26
TTC39A-216ENST00000530004 C6orf15Q6UXA7 325 aaPredicted RBP13.45□□□□□ -0.26
TTC39A-216ENST00000530004 TIPARPQ7Z3E1 657 aaKnown RBP13.45□□□□□ -0.26
TTC39A-216ENST00000530004 ZNF595Q8IYB9 648 aa13.45□□□□□ -0.26
TTC39A-216ENST00000530004 XAGE5Q8WWM1 108 aa13.45□□□□□ -0.26
TTC39A-216ENST00000530004 OTUB1Q96FW1 271 aaPredicted RBP13.45□□□□□ -0.26
TTC39A-216ENST00000530004 C16orf58Q96GQ5 468 aa13.45□□□□□ -0.26
TTC39A-216ENST00000530004 HSH2DQ96JZ2 352 aa13.45□□□□□ -0.26
TTC39A-216ENST00000530004 THSD1Q9NS62 852 aa13.45□□□□□ -0.26
TTC39A-216ENST00000530004 ADPRHL2Q9NX46 363 aa13.45□□□□□ -0.26
TTC39A-216ENST00000530004 PTGFRNQ9P2B2 879 aa13.45□□□□□ -0.26
TTC39A-216ENST00000530004 P2RX2Q9UBL9 471 aa13.45□□□□□ -0.26
TTC39A-216ENST00000530004 GIMAP1-GIMAP5A0A087WTJ2 511 aa13.45□□□□□ -0.26
TTC39A-216ENST00000530004 SAC3D1A6NKF1 404 aa13.45□□□□□ -0.26
TTC39A-216ENST00000530004 CLDN4O14493 209 aa13.45□□□□□ -0.26
TTC39A-216ENST00000530004 SUV39H1O43463 412 aa13.45□□□□□ -0.26
TTC39A-216ENST00000530004 OR10H2O60403 315 aa13.45□□□□□ -0.26
TTC39A-216ENST00000530004 CTNSO60931 367 aa13.45□□□□□ -0.26
TTC39A-216ENST00000530004 OPN1SWP03999 348 aa13.45□□□□□ -0.26
TTC39A-216ENST00000530004 TFPTP0C1Z6 253 aa13.45□□□□□ -0.26
TTC39A-216ENST00000530004 HOXB6P17509 224 aaKnown RBP13.45□□□□□ -0.26
TTC39A-216ENST00000530004 FBLP22087 321 aaKnown RBP13.45□□□□□ -0.26
TTC39A-216ENST00000530004 CD82P27701 267 aa13.45□□□□□ -0.26
TTC39A-216ENST00000530004 AQP4P55087 323 aa13.45□□□□□ -0.26
TTC39A-216ENST00000530004 PCBP3P57721 371 aaKnown RBP13.45□□□□□ -0.26
TTC39A-216ENST00000530004 MYBPC3Q14896 1274 aa13.45□□□□□ -0.26
TTC39A-216ENST00000530004 CRB2Q5IJ48 1285 aa13.45□□□□□ -0.26
TTC39A-216ENST00000530004 ARHGAP40Q5TG30 622 aa13.45□□□□□ -0.26
TTC39A-216ENST00000530004 LCN10Q6JVE6 187 aa13.45□□□□□ -0.26
TTC39A-216ENST00000530004 REEP3Q6NUK4 255 aa13.45□□□□□ -0.26
TTC39A-216ENST00000530004 COX15Q7KZN9 410 aa13.45□□□□□ -0.26
TTC39A-216ENST00000530004 VTCN1Q7Z7D3 282 aa13.45□□□□□ -0.26
TTC39A-216ENST00000530004 DOK4Q8TEW6 326 aa13.45□□□□□ -0.26
TTC39A-216ENST00000530004 TAMM41Q96BW9 452 aa13.45□□□□□ -0.26
TTC39A-216ENST00000530004 GIMAP5Q96F15 307 aa13.45□□□□□ -0.26
TTC39A-216ENST00000530004 TMEM19Q96HH6 336 aa13.45□□□□□ -0.26
TTC39A-216ENST00000530004 TPD52L3Q96J77 140 aa13.45□□□□□ -0.26
TTC39A-216ENST00000530004 MS4A4EQ96PG1 132 aa13.45□□□□□ -0.26
TTC39A-216ENST00000530004 CIB1Q99828 191 aa13.45□□□□□ -0.26
TTC39A-216ENST00000530004 PRTFDC1Q9NRG1 225 aa13.45□□□□□ -0.26
TTC39A-216ENST00000530004 NTMQ9P121 344 aa13.45□□□□□ -0.26
TTC39A-216ENST00000530004 WDFY3Q8IZQ1 3526 aa13.44□□□□□ -0.26
TTC39A-216ENST00000530004 SPTBN4Q9H254 2564 aa13.44□□□□□ -0.26
TTC39A-216ENST00000530004 PRAMEF27A3QJZ7 478 aa13.44□□□□□ -0.26
TTC39A-216ENST00000530004 TMEM247A6NEH6 219 aa13.44□□□□□ -0.26
TTC39A-216ENST00000530004 IQCJ-SCHIP1C9J366 451 aaPredicted RBP13.44□□□□□ -0.26
TTC39A-216ENST00000530004 STMND1H3BQB6 276 aa13.44□□□□□ -0.26
TTC39A-216ENST00000530004 M0QX08 132 aa13.44□□□□□ -0.26
TTC39A-216ENST00000530004 CLOCKO15516 846 aa13.44□□□□□ -0.26
TTC39A-216ENST00000530004 SLC28A2O43868 658 aa13.44□□□□□ -0.26
TTC39A-216ENST00000530004 DEAF1O75398 565 aaPredicted RBP13.44□□□□□ -0.26
TTC39A-216ENST00000530004 NME6O75414 186 aaPredicted RBP13.44□□□□□ -0.26
TTC39A-216ENST00000530004 SLC35E2P0CK97 266 aa13.44□□□□□ -0.26
TTC39A-216ENST00000530004 SOX18P35713 384 aa13.44□□□□□ -0.26
TTC39A-216ENST00000530004 XCR1P46094 333 aa13.44□□□□□ -0.26
TTC39A-216ENST00000530004 STX4Q12846 297 aa13.44□□□□□ -0.26
TTC39A-216ENST00000530004 MAPK11Q15759 364 aa13.44□□□□□ -0.26
TTC39A-216ENST00000530004 PRICKLE4Q2TBC4 344 aa13.44□□□□□ -0.26
TTC39A-216ENST00000530004 RPS26P11Q5JNZ5 115 aaPredicted RBP13.44□□□□□ -0.26
TTC39A-216ENST00000530004 FAM199XQ6PEV8 388 aaPredicted RBP13.44□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms