RNA–Protein interactions for RNA: ENST00000529553.1

AMBRA1-207, Transcript of autophagy and beclin 1 regulator 1, humanhuman

TSL 3

Gene AMBRA1, Length 586 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AMBRA1-207ENST00000529553 LINC01387J3KSC0 135 aa10.45□□□□□ -0.74
AMBRA1-207ENST00000529553 RTCAO00442 366 aaKnown RBP10.45□□□□□ -0.74
AMBRA1-207ENST00000529553 ZIC3O60481 467 aa10.45□□□□□ -0.74
AMBRA1-207ENST00000529553 PYGBP11216 843 aa10.45□□□□□ -0.74
AMBRA1-207ENST00000529553 CFPP27918 469 aa10.45□□□□□ -0.74
AMBRA1-207ENST00000529553 SERPINB1P30740 379 aa10.45□□□□□ -0.74
AMBRA1-207ENST00000529553 SSTR4P31391 388 aa10.45□□□□□ -0.74
AMBRA1-207ENST00000529553 DEKP35659 375 aaKnown RBP10.45□□□□□ -0.74
AMBRA1-207ENST00000529553 MAGEA3P43357 314 aa10.45□□□□□ -0.74
AMBRA1-207ENST00000529553 KIF5AQ12840 1032 aa10.45□□□□□ -0.74
AMBRA1-207ENST00000529553 DOC2AQ14183 400 aa10.45□□□□□ -0.74
AMBRA1-207ENST00000529553 TBCCQ15814 346 aa10.45□□□□□ -0.74
AMBRA1-207ENST00000529553 ZNF672Q499Z4 452 aaPredicted RBP10.45□□□□□ -0.74
AMBRA1-207ENST00000529553 DEPDC1Q5TB30 811 aa10.45□□□□□ -0.74
AMBRA1-207ENST00000529553 ADNP2Q6IQ32 1131 aa10.45□□□□□ -0.74
AMBRA1-207ENST00000529553 FAM45BPQ6NSW5 357 aa10.45□□□□□ -0.74
AMBRA1-207ENST00000529553 BEND4Q6ZU67 534 aa10.45□□□□□ -0.74
AMBRA1-207ENST00000529553 MEX3DQ86XN8 651 aaKnown RBP10.45□□□□□ -0.74
AMBRA1-207ENST00000529553 TCAIMQ8N3R3 496 aa10.45□□□□□ -0.74
AMBRA1-207ENST00000529553 ZCCHC7Q8N3Z6 543 aaKnown RBP10.45□□□□□ -0.74
AMBRA1-207ENST00000529553 SGMS2Q8NHU3 365 aa10.45□□□□□ -0.74
AMBRA1-207ENST00000529553 RDH11Q8TC12 318 aa10.45□□□□□ -0.74
AMBRA1-207ENST00000529553 FAM45AQ8TCE6 357 aa10.45□□□□□ -0.74
AMBRA1-207ENST00000529553 FIG4Q92562 907 aa10.45□□□□□ -0.74
AMBRA1-207ENST00000529553 UBE2E3Q969T4 207 aa10.45□□□□□ -0.74
AMBRA1-207ENST00000529553 CMTM7Q96FZ5 175 aa10.45□□□□□ -0.74
AMBRA1-207ENST00000529553 NODALQ96S42 347 aa10.45□□□□□ -0.74
AMBRA1-207ENST00000529553 CNOT10Q9H9A5 744 aaKnown RBP10.45□□□□□ -0.74
AMBRA1-207ENST00000529553 GALNT9Q9HCQ5 603 aa10.45□□□□□ -0.74
AMBRA1-207ENST00000529553 NGBQ9NPG2 151 aa10.45□□□□□ -0.74
AMBRA1-207ENST00000529553 DNAJC11Q9NVH1 559 aa10.45□□□□□ -0.74
AMBRA1-207ENST00000529553 KLRF1Q9NZS2 232 aa10.45□□□□□ -0.74
AMBRA1-207ENST00000529553 CFL2Q9Y281 166 aa10.45□□□□□ -0.74
AMBRA1-207ENST00000529553 HEATR5AQ86XA9 2040 aa10.45□□□□□ -0.74
AMBRA1-207ENST00000529553 ACOX3O15254 700 aa10.44□□□□□ -0.74
AMBRA1-207ENST00000529553 PRAMEF4O60810 478 aa10.44□□□□□ -0.74
AMBRA1-207ENST00000529553 SLC25A16P16260 332 aa10.44□□□□□ -0.74
AMBRA1-207ENST00000529553 KCNJ1P48048 391 aa10.44□□□□□ -0.74
AMBRA1-207ENST00000529553 SRSF2Q01130 221 aaKnown RBP10.44□□□□□ -0.74
AMBRA1-207ENST00000529553 HMGCS1Q01581 520 aa10.44□□□□□ -0.74
AMBRA1-207ENST00000529553 E2F2Q14209 437 aa10.44□□□□□ -0.74
AMBRA1-207ENST00000529553 EXOC3L2Q2M3D2 409 aa10.44□□□□□ -0.74
AMBRA1-207ENST00000529553 PGGHGQ32M88 737 aa10.44□□□□□ -0.74
AMBRA1-207ENST00000529553 CDKL4Q5MAI5 379 aa10.44□□□□□ -0.74
AMBRA1-207ENST00000529553 NCMAPQ5T1S8 102 aa10.44□□□□□ -0.74
AMBRA1-207ENST00000529553 PRAMEF9Q5VWM5 478 aa10.44□□□□□ -0.74
AMBRA1-207ENST00000529553 KHDRBS2Q5VWX1 349 aaKnown RBP10.44□□□□□ -0.74
AMBRA1-207ENST00000529553 ANKRD22Q5VYY1 191 aa10.44□□□□□ -0.74
AMBRA1-207ENST00000529553 C18orf63Q68DL7 685 aa10.44□□□□□ -0.74
AMBRA1-207ENST00000529553 C12orf54Q6X4T0 127 aa10.44□□□□□ -0.74
AMBRA1-207ENST00000529553 ADAMTSL2Q86TH1 951 aa10.44□□□□□ -0.74
AMBRA1-207ENST00000529553 WFDC8Q8IUA0 241 aa10.44□□□□□ -0.74
AMBRA1-207ENST00000529553 GALNT12Q8IXK2 581 aa10.44□□□□□ -0.74
AMBRA1-207ENST00000529553 PRR22Q8IZ63 422 aa10.44□□□□□ -0.74
AMBRA1-207ENST00000529553 RFLNBQ8N5W9 214 aa10.44□□□□□ -0.74
AMBRA1-207ENST00000529553 OR6K3Q8NGY3 331 aa10.44□□□□□ -0.74
AMBRA1-207ENST00000529553 RAB3IL1Q8TBN0 382 aa10.44□□□□□ -0.74
AMBRA1-207ENST00000529553 RGMAQ96B86 450 aa10.44□□□□□ -0.74
AMBRA1-207ENST00000529553 TMCO6Q96DC7 493 aa10.44□□□□□ -0.74
AMBRA1-207ENST00000529553 ZMYND19Q96E35 227 aaPredicted RBP10.44□□□□□ -0.74
AMBRA1-207ENST00000529553 TACO1Q9BSH4 297 aaKnown RBP10.44□□□□□ -0.74
AMBRA1-207ENST00000529553 TRAF4Q9BUZ4 470 aaPredicted RBP10.44□□□□□ -0.74
AMBRA1-207ENST00000529553 HDHD5Q9BXW7 423 aa10.44□□□□□ -0.74
AMBRA1-207ENST00000529553 ACTR6Q9GZN1 396 aa10.44□□□□□ -0.74
AMBRA1-207ENST00000529553 ADAM19Q9H013 955 aa10.44□□□□□ -0.74
AMBRA1-207ENST00000529553 NXF5Q9H1B4 397 aaKnown RBP10.44□□□□□ -0.74
AMBRA1-207ENST00000529553 ALG2Q9H553 416 aa10.44□□□□□ -0.74
AMBRA1-207ENST00000529553 EMC9Q9Y3B6 208 aa10.44□□□□□ -0.74
AMBRA1-207ENST00000529553 PRAMEF25A6NGN4 478 aa10.43□□□□□ -0.74
AMBRA1-207ENST00000529553 UBFD1O14562 309 aaKnown RBP10.43□□□□□ -0.74
AMBRA1-207ENST00000529553 SSX4O60224 188 aa10.43□□□□□ -0.74
AMBRA1-207ENST00000529553 NDUFS7O75251 213 aa10.43□□□□□ -0.74
AMBRA1-207ENST00000529553 TTC4O95801 387 aa10.43□□□□□ -0.74
AMBRA1-207ENST00000529553 TGFB1P01137 390 aa10.43□□□□□ -0.74
AMBRA1-207ENST00000529553 CD8AP01732 235 aa10.43□□□□□ -0.74
AMBRA1-207ENST00000529553 CD3EP07766 207 aa10.43□□□□□ -0.74
AMBRA1-207ENST00000529553 FCGR2AP12318 317 aa10.43□□□□□ -0.74
AMBRA1-207ENST00000529553 ZNF37AP17032 561 aaPredicted RBP10.43□□□□□ -0.74
AMBRA1-207ENST00000529553 PGAM1P18669 254 aa10.43□□□□□ -0.74
AMBRA1-207ENST00000529553 CD22P20273 847 aa10.43□□□□□ -0.74
AMBRA1-207ENST00000529553 PSMB1P20618 241 aaKnown RBP10.43□□□□□ -0.74
AMBRA1-207ENST00000529553 HNF1AP20823 631 aa10.43□□□□□ -0.74
AMBRA1-207ENST00000529553 GPX3P22352 226 aa10.43□□□□□ -0.74
AMBRA1-207ENST00000529553 CLDN15P56746 228 aa10.43□□□□□ -0.74
AMBRA1-207ENST00000529553 B3GALT5-AS1P59052 145 aa10.43□□□□□ -0.74
AMBRA1-207ENST00000529553 CYP1B1Q16678 543 aa10.43□□□□□ -0.74
AMBRA1-207ENST00000529553 C18orf21Q32NC0 220 aaPredicted RBP10.43□□□□□ -0.74
AMBRA1-207ENST00000529553 MRM1Q6IN84 353 aaKnown RBP10.43□□□□□ -0.74
AMBRA1-207ENST00000529553 CLEC2AQ6UVW9 174 aa10.43□□□□□ -0.74
AMBRA1-207ENST00000529553 FRA10AC1Q70Z53 315 aa10.43□□□□□ -0.74
AMBRA1-207ENST00000529553 DTX2Q86UW9 622 aa10.43□□□□□ -0.74
AMBRA1-207ENST00000529553 EXOC3L1Q86VI1 746 aa10.43□□□□□ -0.74
AMBRA1-207ENST00000529553 LAS2Q8IYD9 372 aa10.43□□□□□ -0.74
AMBRA1-207ENST00000529553 AGGF1Q8N302 714 aaeCLIP10.43□□□□□ -0.74
AMBRA1-207ENST00000529553 RNF10Q8N5U6 811 aaKnown RBP10.43□□□□□ -0.74
AMBRA1-207ENST00000529553 STEAP2Q8NFT2 490 aa10.43□□□□□ -0.74
AMBRA1-207ENST00000529553 PROX1Q92786 737 aa10.43□□□□□ -0.74
AMBRA1-207ENST00000529553 ADAD1Q96M93 576 aaKnown RBP10.43□□□□□ -0.74
AMBRA1-207ENST00000529553 CENPKQ9BS16 269 aa10.43□□□□□ -0.74
AMBRA1-207ENST00000529553 NTMT1Q9BV86 223 aa10.43□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 24.6 ms