RNA–Protein interactions for RNA: ENST00000529046.5

CSDE1-212, Transcript of cold shock domain containing E1, humanhuman

TSL 4

Gene CSDE1, Length 571 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSDE1-212ENST00000529046 KALRNO60229 2985 aa4.3□□□□□ -1.72
CSDE1-212ENST00000529046 URB1O60287 2271 aaKnown RBP4.3□□□□□ -1.72
CSDE1-212ENST00000529046 APC2O95996 2303 aa4.29□□□□□ -1.72
CSDE1-212ENST00000529046 KNL1Q8NG31 2342 aa4.29□□□□□ -1.72
CSDE1-212ENST00000529046 PLXNA2O75051 1894 aa4.29□□□□□ -1.72
CSDE1-212ENST00000529046 TMEM131Q92545 1883 aa4.29□□□□□ -1.72
CSDE1-212ENST00000529046 CYSRT1A8MQ03 144 aa4.29□□□□□ -1.72
CSDE1-212ENST00000529046 LMO7DNF2Z398 122 aa4.29□□□□□ -1.72
CSDE1-212ENST00000529046 TMX2-CTNND1H3BSU7 103 aa4.29□□□□□ -1.72
CSDE1-212ENST00000529046 K7ERQ8 282 aa4.29□□□□□ -1.72
CSDE1-212ENST00000529046 KPNA3O00505 521 aaPredicted RBP4.29□□□□□ -1.72
CSDE1-212ENST00000529046 FPGTO14772 594 aa4.29□□□□□ -1.72
CSDE1-212ENST00000529046 SNAP91O60641 907 aa4.29□□□□□ -1.72
CSDE1-212ENST00000529046 LMX1BO60663 402 aa4.29□□□□□ -1.72
CSDE1-212ENST00000529046 GRAP2O75791 330 aa4.29□□□□□ -1.72
CSDE1-212ENST00000529046 BCL10O95999 233 aa4.29□□□□□ -1.72
CSDE1-212ENST00000529046 PAK4O96013 591 aaPredicted RBP4.29□□□□□ -1.72
CSDE1-212ENST00000529046 CRYAAP02489 173 aa4.29□□□□□ -1.72
CSDE1-212ENST00000529046 SP1P08047 785 aa4.29□□□□□ -1.72
CSDE1-212ENST00000529046 ABCB1P08183 1280 aaPredicted RBP4.29□□□□□ -1.72
CSDE1-212ENST00000529046 HOXC4P09017 264 aaPredicted RBP4.29□□□□□ -1.72
CSDE1-212ENST00000529046 LINGO3P0C6S8 592 aa4.29□□□□□ -1.72
CSDE1-212ENST00000529046 UCHL3P15374 230 aa4.29□□□□□ -1.72
CSDE1-212ENST00000529046 MSH3P20585 1137 aa4.29□□□□□ -1.72
CSDE1-212ENST00000529046 CBLP22681 906 aa4.29□□□□□ -1.72
CSDE1-212ENST00000529046 EPHA2P29317 976 aa4.29□□□□□ -1.72
CSDE1-212ENST00000529046 MAT2AP31153 395 aaKnown RBP4.29□□□□□ -1.72
CSDE1-212ENST00000529046 CDH13P55290 713 aa4.29□□□□□ -1.72
CSDE1-212ENST00000529046 YBEYP58557 167 aaPredicted RBP4.29□□□□□ -1.72
CSDE1-212ENST00000529046 SNRPD1P62314 119 aaKnown RBP4.29□□□□□ -1.72
CSDE1-212ENST00000529046 ARF5P84085 180 aa4.29□□□□□ -1.72
CSDE1-212ENST00000529046 SEMG2Q02383 582 aa4.29□□□□□ -1.72
CSDE1-212ENST00000529046 RAD51Q06609 339 aa4.29□□□□□ -1.72
CSDE1-212ENST00000529046 PRKAA1Q13131 559 aa4.29□□□□□ -1.72
CSDE1-212ENST00000529046 SGCGQ13326 291 aa4.29□□□□□ -1.72
CSDE1-212ENST00000529046 EIF3IQ13347 325 aaKnown RBP4.29□□□□□ -1.72
CSDE1-212ENST00000529046 ISXQ2M1V0 245 aa4.29□□□□□ -1.72
CSDE1-212ENST00000529046 C9orf152Q5JTZ5 239 aa4.29□□□□□ -1.72
CSDE1-212ENST00000529046 SLC30A6Q6NXT4 461 aa4.29□□□□□ -1.72
CSDE1-212ENST00000529046 RBPMS2Q6ZRY4 209 aaKnown RBP4.29□□□□□ -1.72
CSDE1-212ENST00000529046 DCUN1D3Q8IWE4 304 aa4.29□□□□□ -1.72
CSDE1-212ENST00000529046 SLC22A18ASQ8N1D0 253 aa4.29□□□□□ -1.72
CSDE1-212ENST00000529046 FBXO39Q8N4B4 442 aa4.29□□□□□ -1.72
CSDE1-212ENST00000529046 TTC30BQ8N4P2 665 aa4.29□□□□□ -1.72
CSDE1-212ENST00000529046 TC2NQ8N9U0 490 aa4.29□□□□□ -1.72
CSDE1-212ENST00000529046 OR6C4Q8NGE1 309 aa4.29□□□□□ -1.72
CSDE1-212ENST00000529046 OR2AP1Q8NGE2 309 aa4.29□□□□□ -1.72
CSDE1-212ENST00000529046 NAT6Q93015 286 aa4.29□□□□□ -1.72
CSDE1-212ENST00000529046 NTAN1Q96AB6 310 aa4.29□□□□□ -1.72
CSDE1-212ENST00000529046 ZNF830Q96NB3 372 aaPredicted RBP4.29□□□□□ -1.72
CSDE1-212ENST00000529046 WNT5BQ9H1J7 359 aa4.29□□□□□ -1.72
CSDE1-212ENST00000529046 TFB2MQ9H5Q4 396 aaKnown RBP4.29□□□□□ -1.72
CSDE1-212ENST00000529046 ASCL3Q9NQ33 180 aa4.29□□□□□ -1.72
CSDE1-212ENST00000529046 OR12D3Q9UGF7 316 aa4.29□□□□□ -1.72
CSDE1-212ENST00000529046 HPCAL4Q9UM19 191 aa4.29□□□□□ -1.72
CSDE1-212ENST00000529046 SMG1Q96Q15 3661 aaKnown RBP4.28□□□□□ -1.72
CSDE1-212ENST00000529046 FASNP49327 2511 aaKnown RBP4.28□□□□□ -1.72
CSDE1-212ENST00000529046 SYNJ2BP-COX16A0A087WUM0 186 aa4.28□□□□□ -1.72
CSDE1-212ENST00000529046 A0A1W2PPM1 405 aa4.28□□□□□ -1.72
CSDE1-212ENST00000529046 TSPAN11A1L157 253 aa4.28□□□□□ -1.72
CSDE1-212ENST00000529046 SIGLEC16A6NMB1 481 aa4.28□□□□□ -1.72
CSDE1-212ENST00000529046 F8VZ95 297 aa4.28□□□□□ -1.72
CSDE1-212ENST00000529046 K7ENP7 123 aa4.28□□□□□ -1.72
CSDE1-212ENST00000529046 RNF103O00237 685 aa4.28□□□□□ -1.72
CSDE1-212ENST00000529046 NTN3O00634 580 aaPredicted RBP4.28□□□□□ -1.72
CSDE1-212ENST00000529046 SLC31A1O15431 190 aa4.28□□□□□ -1.72
CSDE1-212ENST00000529046 AQP9O43315 295 aa4.28□□□□□ -1.72
CSDE1-212ENST00000529046 KDELR3O43731 214 aa4.28□□□□□ -1.72
CSDE1-212ENST00000529046 FGF17O60258 216 aa4.28□□□□□ -1.72
CSDE1-212ENST00000529046 WDPCPO95876 746 aa4.28□□□□□ -1.72
CSDE1-212ENST00000529046 TSHBP01222 138 aa4.28□□□□□ -1.72
CSDE1-212ENST00000529046 OR2T7P0C7T2 308 aa4.28□□□□□ -1.72
CSDE1-212ENST00000529046 IGHV4-38-2P0DP08 117 aa4.28□□□□□ -1.72
CSDE1-212ENST00000529046 CALRP27797 417 aaKnown RBP4.28□□□□□ -1.72
CSDE1-212ENST00000529046 MTIF2P46199 727 aaKnown RBP4.28□□□□□ -1.72
CSDE1-212ENST00000529046 CSNK1DP48730 415 aa4.28□□□□□ -1.72
CSDE1-212ENST00000529046 SULT1E1P49888 294 aa4.28□□□□□ -1.72
CSDE1-212ENST00000529046 CCNHP51946 323 aaPredicted RBP4.28□□□□□ -1.72
CSDE1-212ENST00000529046 CDR2Q01850 454 aa4.28□□□□□ -1.72
CSDE1-212ENST00000529046 ELP6Q0PNE2 266 aa4.28□□□□□ -1.72
CSDE1-212ENST00000529046 SNAPC1Q16533 368 aa4.28□□□□□ -1.72
CSDE1-212ENST00000529046 CLPPQ16740 277 aaPredicted RBP4.28□□□□□ -1.72
CSDE1-212ENST00000529046 TPD52L1Q16890 204 aaPredicted RBP4.28□□□□□ -1.72
CSDE1-212ENST00000529046 CCDC14Q49A88 953 aa4.28□□□□□ -1.72
CSDE1-212ENST00000529046 TMEM52BQ4KMG9 183 aa4.28□□□□□ -1.72
CSDE1-212ENST00000529046 TCP11X2Q5H9J9 407 aa4.28□□□□□ -1.72
CSDE1-212ENST00000529046 TECRLQ5HYJ1 363 aa4.28□□□□□ -1.72
CSDE1-212ENST00000529046 RNASEH2BQ5TBB1 312 aaKnown RBP4.28□□□□□ -1.72
CSDE1-212ENST00000529046 KRTAP5-4Q6L8H1 288 aa4.28□□□□□ -1.72
CSDE1-212ENST00000529046 PPP1R2P3Q6NXS1 205 aa4.28□□□□□ -1.72
CSDE1-212ENST00000529046 KDM7AQ6ZMT4 941 aa4.28□□□□□ -1.72
CSDE1-212ENST00000529046 MACC1Q6ZN28 852 aa4.28□□□□□ -1.72
CSDE1-212ENST00000529046 PHF13Q86YI8 300 aaPredicted RBP4.28□□□□□ -1.72
CSDE1-212ENST00000529046 MARCH9Q86YJ5 346 aa4.28□□□□□ -1.72
CSDE1-212ENST00000529046 CREBRFQ8IUR6 639 aa4.28□□□□□ -1.72
CSDE1-212ENST00000529046 PLD3Q8IV08 490 aa4.28□□□□□ -1.72
CSDE1-212ENST00000529046 UMODL1-AS1Q8N2C9 162 aa4.28□□□□□ -1.72
CSDE1-212ENST00000529046 ZNF843Q8N446 348 aa4.28□□□□□ -1.72
CSDE1-212ENST00000529046 TRIM58Q8NG06 486 aa4.28□□□□□ -1.72
CSDE1-212ENST00000529046 OR2T12Q8NG77 320 aa4.28□□□□□ -1.72
Retrieved 100 of 20,778 RNA–protein pairs in 95.6 ms