RNA–Protein interactions for RNA: ENST00000528516.5

LTBP3-210, Transcript of latent transforming growth factor beta binding protein 3, humanhuman

TSL 1 (best)

Gene LTBP3, Length 3,935 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LTBP3-210ENST00000528516 ADAM30Q9UKF2 790 aa16.97■□□□□ 0.31
LTBP3-210ENST00000528516 OR1A2Q9Y585 309 aa16.97■□□□□ 0.31
LTBP3-210ENST00000528516 OTOFQ9HC10 1997 aa16.97■□□□□ 0.31
LTBP3-210ENST00000528516 TEX46H3BTG2 121 aa16.97■□□□□ 0.31
LTBP3-210ENST00000528516 J3KTA2 159 aa16.97■□□□□ 0.31
LTBP3-210ENST00000528516 SLC30A4O14863 429 aa16.97■□□□□ 0.31
LTBP3-210ENST00000528516 SCG5P05408 212 aa16.97■□□□□ 0.31
LTBP3-210ENST00000528516 H1F0P07305 194 aaKnown RBP16.97■□□□□ 0.31
LTBP3-210ENST00000528516 CELP19835 753 aa16.97■□□□□ 0.31
LTBP3-210ENST00000528516 CAMK1Q14012 370 aa16.97■□□□□ 0.31
LTBP3-210ENST00000528516 CCSMST1Q4G0I0 132 aa16.97■□□□□ 0.31
LTBP3-210ENST00000528516 PUM2Q8TB72 1066 aaKnown RBP eCLIP16.97■□□□□ 0.31
LTBP3-210ENST00000528516 UPRTQ96BW1 309 aa16.97■□□□□ 0.31
LTBP3-210ENST00000528516 SIGLEC11Q96RL6 698 aa16.97■□□□□ 0.31
LTBP3-210ENST00000528516 GABARAPL3Q9BY60 117 aa16.97■□□□□ 0.31
LTBP3-210ENST00000528516 PHPT1Q9NRX4 125 aaPredicted RBP16.97■□□□□ 0.31
LTBP3-210ENST00000528516 LOC105369274A0A096LPK9 316 aa16.97■□□□□ 0.31
LTBP3-210ENST00000528516 TRIM3O75382 744 aaPredicted RBP16.97■□□□□ 0.31
LTBP3-210ENST00000528516 IDSP22304 550 aa16.97■□□□□ 0.31
LTBP3-210ENST00000528516 ZNF763Q0D2J5 394 aa16.97■□□□□ 0.31
LTBP3-210ENST00000528516 PIN1Q13526 163 aaPredicted RBP16.97■□□□□ 0.31
LTBP3-210ENST00000528516 IHHQ14623 411 aa16.97■□□□□ 0.31
LTBP3-210ENST00000528516 LAMTOR1Q6IAA8 161 aa16.97■□□□□ 0.31
LTBP3-210ENST00000528516 ATCAYQ86WG3 371 aa16.97■□□□□ 0.31
LTBP3-210ENST00000528516 OR4N4Q8N0Y3 316 aa16.97■□□□□ 0.31
LTBP3-210ENST00000528516 ZBED6CLQ96FA7 236 aaPredicted RBP16.97■□□□□ 0.31
LTBP3-210ENST00000528516 RETREG1Q9H6L5 497 aa16.97■□□□□ 0.31
LTBP3-210ENST00000528516 ELAC1Q9H777 363 aaKnown RBP16.97■□□□□ 0.31
LTBP3-210ENST00000528516 YARS2Q9Y2Z4 477 aaKnown RBP16.97■□□□□ 0.31
LTBP3-210ENST00000528516 TGM5O43548 720 aa16.96■□□□□ 0.31
LTBP3-210ENST00000528516 PROS1P07225 676 aa16.96■□□□□ 0.31
LTBP3-210ENST00000528516 MGAT3Q09327 533 aa16.96■□□□□ 0.31
LTBP3-210ENST00000528516 P2RY14Q15391 338 aa16.96■□□□□ 0.31
LTBP3-210ENST00000528516 HSD11B1LQ7Z5J1 315 aa16.96■□□□□ 0.31
LTBP3-210ENST00000528516 COMMD2Q86X83 199 aa16.96■□□□□ 0.31
LTBP3-210ENST00000528516 C2orf15Q8WU43 125 aaKnown RBP16.96■□□□□ 0.31
LTBP3-210ENST00000528516 DOHHQ9BU89 302 aa16.96■□□□□ 0.31
LTBP3-210ENST00000528516 SLC29A3Q9BZD2 475 aa16.96■□□□□ 0.31
LTBP3-210ENST00000528516 PROM1O43490 865 aa16.96■□□□□ 0.31
LTBP3-210ENST00000528516 CSO75390 466 aaKnown RBP16.96■□□□□ 0.31
LTBP3-210ENST00000528516 CDC123O75794 336 aaPredicted RBP16.96■□□□□ 0.31
LTBP3-210ENST00000528516 HRGP04196 525 aa16.96■□□□□ 0.31
LTBP3-210ENST00000528516 ANXA3P12429 323 aa16.96■□□□□ 0.31
LTBP3-210ENST00000528516 ICAM2P13598 275 aa16.96■□□□□ 0.31
LTBP3-210ENST00000528516 IL1RNP18510 177 aa16.96■□□□□ 0.31
LTBP3-210ENST00000528516 VIPR1P32241 457 aa16.96■□□□□ 0.31
LTBP3-210ENST00000528516 PGDP52209 483 aa16.96■□□□□ 0.31
LTBP3-210ENST00000528516 SMIM11AP58511 58 aa16.96■□□□□ 0.31
LTBP3-210ENST00000528516 TOR1AIP1Q5JTV8 583 aa16.96■□□□□ 0.31
LTBP3-210ENST00000528516 FAM46CQ5VWP2 391 aa16.96■□□□□ 0.31
LTBP3-210ENST00000528516 ADNP2Q6IQ32 1131 aa16.96■□□□□ 0.31
LTBP3-210ENST00000528516 PIAS4Q8N2W9 510 aaPredicted RBP16.96■□□□□ 0.31
LTBP3-210ENST00000528516 LHFPL5Q8TAF8 219 aa16.96■□□□□ 0.31
LTBP3-210ENST00000528516 NEIL2Q969S2 332 aa16.96■□□□□ 0.31
LTBP3-210ENST00000528516 FBXW5Q969U6 566 aa16.96■□□□□ 0.31
LTBP3-210ENST00000528516 SCRN2Q96FV2 425 aa16.96■□□□□ 0.31
LTBP3-210ENST00000528516 EFCAB11Q9BUY7 163 aa16.96■□□□□ 0.31
LTBP3-210ENST00000528516 STOX2Q9P2F5 926 aaPredicted RBP16.96■□□□□ 0.31
LTBP3-210ENST00000528516 MKL2Q9ULH7 1088 aa16.96■□□□□ 0.31
LTBP3-210ENST00000528516 MED16Q9Y2X0 877 aa16.96■□□□□ 0.31
LTBP3-210ENST00000528516 PCDH17O14917 1159 aa16.96■□□□□ 0.31
LTBP3-210ENST00000528516 PGRMC2O15173 223 aa16.96■□□□□ 0.31
LTBP3-210ENST00000528516 SMAD9O15198 467 aaKnown RBP16.96■□□□□ 0.31
LTBP3-210ENST00000528516 PLATP00750 562 aa16.96■□□□□ 0.31
LTBP3-210ENST00000528516 BIKQ13323 160 aa16.96■□□□□ 0.31
LTBP3-210ENST00000528516 MINDY4Q4G0A6 757 aa16.96■□□□□ 0.31
LTBP3-210ENST00000528516 ZNF542PQ5EBM4 170 aa16.96■□□□□ 0.31
LTBP3-210ENST00000528516 CLVS2Q5SYC1 327 aa16.96■□□□□ 0.31
LTBP3-210ENST00000528516 COMMD6Q7Z4G1 85 aa16.96■□□□□ 0.31
LTBP3-210ENST00000528516 HDDC2Q7Z4H3 204 aa16.96■□□□□ 0.31
LTBP3-210ENST00000528516 PRSS42Q7Z5A4 293 aa16.96■□□□□ 0.31
LTBP3-210ENST00000528516 SERPINA11Q86U17 422 aa16.96■□□□□ 0.31
LTBP3-210ENST00000528516 SRFBP1Q8NEF9 429 aaKnown RBP16.96■□□□□ 0.31
LTBP3-210ENST00000528516 OR6K6Q8NGW6 343 aa16.96■□□□□ 0.31
LTBP3-210ENST00000528516 RAD9AQ99638 391 aa16.96■□□□□ 0.31
LTBP3-210ENST00000528516 SPATA5L1Q9BVQ7 753 aa16.96■□□□□ 0.31
LTBP3-210ENST00000528516 CHIAQ9BZP6 476 aa16.96■□□□□ 0.31
LTBP3-210ENST00000528516 KCNN2Q9H2S1 579 aa16.96■□□□□ 0.31
LTBP3-210ENST00000528516 RANBP3Q9H6Z4 567 aaPredicted RBP16.96■□□□□ 0.31
LTBP3-210ENST00000528516 TXNL4BQ9NX01 149 aaKnown RBP16.96■□□□□ 0.31
LTBP3-210ENST00000528516 SPTA1P02549 2419 aa16.96■□□□□ 0.3
LTBP3-210ENST00000528516 TRIP12Q14669 1992 aaPredicted RBP16.95■□□□□ 0.3
LTBP3-210ENST00000528516 SOX30O94993 753 aa16.95■□□□□ 0.3
LTBP3-210ENST00000528516 NUP62P37198 522 aaPredicted RBP16.95■□□□□ 0.3
LTBP3-210ENST00000528516 TEKQ02763 1124 aa16.95■□□□□ 0.3
LTBP3-210ENST00000528516 KHDRBS2Q5VWX1 349 aaKnown RBP16.95■□□□□ 0.3
LTBP3-210ENST00000528516 C9orf62Q8N4C0 152 aa16.95■□□□□ 0.3
LTBP3-210ENST00000528516 CREB3L4Q8TEY5 395 aa16.95■□□□□ 0.3
LTBP3-210ENST00000528516 SLC5A11Q8WWX8 675 aa16.95■□□□□ 0.3
LTBP3-210ENST00000528516 SPNS1Q9H2V7 528 aa16.95■□□□□ 0.3
LTBP3-210ENST00000528516 SLC28A3Q9HAS3 691 aa16.95■□□□□ 0.3
LTBP3-210ENST00000528516 FAM120CQ9NX05 1096 aaKnown RBP16.95■□□□□ 0.3
LTBP3-210ENST00000528516 PAPPA2Q9BXP8 1791 aa16.95■□□□□ 0.3
LTBP3-210ENST00000528516 MPZL2O60487 215 aa16.95■□□□□ 0.3
LTBP3-210ENST00000528516 RHOP08100 348 aa16.95■□□□□ 0.3
LTBP3-210ENST00000528516 MRPL3P09001 348 aaKnown RBP16.95■□□□□ 0.3
LTBP3-210ENST00000528516 ACPPP15309 386 aa16.95■□□□□ 0.3
LTBP3-210ENST00000528516 CTGFP29279 349 aa16.95■□□□□ 0.3
LTBP3-210ENST00000528516 CLCN7P51798 805 aa16.95■□□□□ 0.3
LTBP3-210ENST00000528516 GRK1Q15835 563 aa16.95■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms