RNA–Protein interactions for RNA: ENST00000527916.1

CPSF1-203, Transcript of cleavage and polyadenylation specific factor 1, humanhuman

TSL 5

Gene CPSF1, Length 506 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF1-203ENST00000527916 IMPDH1P20839 514 aa9.64□□□□□ -0.87
CPSF1-203ENST00000527916 HSD3B2P26439 372 aa9.64□□□□□ -0.87
CPSF1-203ENST00000527916 SERPINB3P29508 390 aa9.64□□□□□ -0.87
CPSF1-203ENST00000527916 CEACAM8P31997 349 aaPredicted RBP9.64□□□□□ -0.87
CPSF1-203ENST00000527916 TIMP3P35625 211 aa9.64□□□□□ -0.87
CPSF1-203ENST00000527916 CDH13P55290 713 aa9.64□□□□□ -0.87
CPSF1-203ENST00000527916 TRA2BP62995 288 aaKnown RBP9.64□□□□□ -0.87
CPSF1-203ENST00000527916 ERVK-8P63133 956 aa9.64□□□□□ -0.87
CPSF1-203ENST00000527916 CLCQ05315 142 aa9.64□□□□□ -0.87
CPSF1-203ENST00000527916 FUT7Q11130 342 aa9.64□□□□□ -0.87
CPSF1-203ENST00000527916 EBPQ15125 230 aaKnown RBP9.64□□□□□ -0.87
CPSF1-203ENST00000527916 POU4F3Q15319 338 aa9.64□□□□□ -0.87
CPSF1-203ENST00000527916 ZNF678Q5SXM1 525 aa9.64□□□□□ -0.87
CPSF1-203ENST00000527916 CCNYL2Q5T2Q4 361 aa9.64□□□□□ -0.87
CPSF1-203ENST00000527916 LETMD1Q6P1Q0 360 aa9.64□□□□□ -0.87
CPSF1-203ENST00000527916 LACC1Q8IV20 430 aa9.64□□□□□ -0.87
CPSF1-203ENST00000527916 VWA5B2Q8N398 1253 aa9.64□□□□□ -0.87
CPSF1-203ENST00000527916 LIX1Q8N485 282 aa9.64□□□□□ -0.87
CPSF1-203ENST00000527916 C17orf47Q8NEP4 570 aa9.64□□□□□ -0.87
CPSF1-203ENST00000527916 TNIP2Q8NFZ5 429 aa9.64□□□□□ -0.87
CPSF1-203ENST00000527916 OR7G1Q8NGA0 311 aa9.64□□□□□ -0.87
CPSF1-203ENST00000527916 SELENOMQ8WWX9 145 aa9.64□□□□□ -0.87
CPSF1-203ENST00000527916 SMPDL3BQ92485 455 aa9.64□□□□□ -0.87
CPSF1-203ENST00000527916 UCN3Q969E3 161 aa9.64□□□□□ -0.87
CPSF1-203ENST00000527916 SPACA9Q96E40 222 aaPredicted RBP9.64□□□□□ -0.87
CPSF1-203ENST00000527916 DACH2Q96NX9 599 aa9.64□□□□□ -0.87
CPSF1-203ENST00000527916 MRPL1Q9BYD6 325 aaKnown RBP9.64□□□□□ -0.87
CPSF1-203ENST00000527916 WWTR1Q9GZV5 400 aa9.64□□□□□ -0.87
CPSF1-203ENST00000527916 TEX10Q9NXF1 929 aaPredicted RBP9.64□□□□□ -0.87
CPSF1-203ENST00000527916 QPCTLQ9NXS2 382 aa9.64□□□□□ -0.87
CPSF1-203ENST00000527916 TMEM216Q9P0N5 145 aa9.64□□□□□ -0.87
CPSF1-203ENST00000527916 SPRR3Q9UBC9 169 aa9.64□□□□□ -0.87
CPSF1-203ENST00000527916 ZNF225Q9UK10 706 aa9.64□□□□□ -0.87
CPSF1-203ENST00000527916 CES1P1Q9UKY3 287 aa9.64□□□□□ -0.87
CPSF1-203ENST00000527916 ERVK-19Q9WJR5 959 aa9.64□□□□□ -0.87
CPSF1-203ENST00000527916 EIF3LQ9Y262 564 aaKnown RBP9.64□□□□□ -0.87
CPSF1-203ENST00000527916 STK38LQ9Y2H1 464 aa9.64□□□□□ -0.87
CPSF1-203ENST00000527916 PCDHA9Q9Y5H5 950 aa9.64□□□□□ -0.87
CPSF1-203ENST00000527916 CHD3Q12873 2000 aaKnown RBP9.64□□□□□ -0.87
CPSF1-203ENST00000527916 FREM3P0C091 2139 aa9.64□□□□□ -0.87
CPSF1-203ENST00000527916 NCKAP5O14513 1909 aa9.63□□□□□ -0.87
CPSF1-203ENST00000527916 C2orf92A0A1B0GVN3 265 aa9.63□□□□□ -0.87
CPSF1-203ENST00000527916 C1orf226A1L170 272 aa9.63□□□□□ -0.87
CPSF1-203ENST00000527916 SERTM1A2A2V5 107 aa9.63□□□□□ -0.87
CPSF1-203ENST00000527916 CAPN14A8MX76 684 aa9.63□□□□□ -0.87
CPSF1-203ENST00000527916 EEF1E1-BLOC1S5C9J1V9 151 aa9.63□□□□□ -0.87
CPSF1-203ENST00000527916 PPP6CO00743 305 aa9.63□□□□□ -0.87
CPSF1-203ENST00000527916 CASKO14936 926 aa9.63□□□□□ -0.87
CPSF1-203ENST00000527916 EEF1E1O43324 174 aaKnown RBP9.63□□□□□ -0.87
CPSF1-203ENST00000527916 DLX3O60479 287 aa9.63□□□□□ -0.87
CPSF1-203ENST00000527916 CRLF1O75462 422 aa9.63□□□□□ -0.87
CPSF1-203ENST00000527916 SUPT7LO94864 414 aa9.63□□□□□ -0.87
CPSF1-203ENST00000527916 EPPINO95925 133 aa9.63□□□□□ -0.87
CPSF1-203ENST00000527916 PDYNP01213 254 aa9.63□□□□□ -0.87
CPSF1-203ENST00000527916 CLPSP04118 112 aa9.63□□□□□ -0.87
CPSF1-203ENST00000527916 CCL3P10147 92 aa9.63□□□□□ -0.87
CPSF1-203ENST00000527916 PORP16435 677 aaPredicted RBP9.63□□□□□ -0.87
CPSF1-203ENST00000527916 ATP5F1P24539 256 aaPredicted RBP9.63□□□□□ -0.87
CPSF1-203ENST00000527916 DNASE1L1P49184 302 aa9.63□□□□□ -0.87
CPSF1-203ENST00000527916 XKP51811 444 aa9.63□□□□□ -0.87
CPSF1-203ENST00000527916 MAPK12P53778 367 aa9.63□□□□□ -0.87
CPSF1-203ENST00000527916 PRKAA2P54646 552 aa9.63□□□□□ -0.87
CPSF1-203ENST00000527916 GALNT1Q10472 559 aaPredicted RBP9.63□□□□□ -0.87
CPSF1-203ENST00000527916 MAP4K2Q12851 820 aa9.63□□□□□ -0.87
CPSF1-203ENST00000527916 SLC29A2Q14542 456 aa9.63□□□□□ -0.87
CPSF1-203ENST00000527916 RASA2Q15283 850 aa9.63□□□□□ -0.87
CPSF1-203ENST00000527916 NTRK2Q16620 822 aa9.63□□□□□ -0.87
CPSF1-203ENST00000527916 UNC50Q53HI1 259 aa9.63□□□□□ -0.87
CPSF1-203ENST00000527916 TBCELQ5QJ74 424 aa9.63□□□□□ -0.87
CPSF1-203ENST00000527916 SLC48A1Q6P1K1 146 aa9.63□□□□□ -0.87
CPSF1-203ENST00000527916 SEM1Q6ZVN7 128 aa9.63□□□□□ -0.87
CPSF1-203ENST00000527916 COMMD6Q7Z4G1 85 aa9.63□□□□□ -0.87
CPSF1-203ENST00000527916 YTHDF3Q7Z739 585 aaKnown RBP9.63□□□□□ -0.87
CPSF1-203ENST00000527916 SLC22A9Q8IVM8 553 aa9.63□□□□□ -0.87
CPSF1-203ENST00000527916 GALNT12Q8IXK2 581 aa9.63□□□□□ -0.87
CPSF1-203ENST00000527916 TAGAPQ8N103 731 aa9.63□□□□□ -0.87
CPSF1-203ENST00000527916 ZNF615Q8N8J6 731 aa9.63□□□□□ -0.87
CPSF1-203ENST00000527916 ZNF441Q8N8Z8 693 aa9.63□□□□□ -0.87
CPSF1-203ENST00000527916 NAXEQ8NCW5 288 aa9.63□□□□□ -0.87
CPSF1-203ENST00000527916 TM4SF18Q96CE8 201 aa9.63□□□□□ -0.87
CPSF1-203ENST00000527916 L3HYPDHQ96EM0 354 aa9.63□□□□□ -0.87
CPSF1-203ENST00000527916 HSPBAP1Q96EW2 488 aa9.63□□□□□ -0.87
CPSF1-203ENST00000527916 ZNF382Q96SR6 550 aa9.63□□□□□ -0.87
CPSF1-203ENST00000527916 PROK2Q9HC23 129 aa9.63□□□□□ -0.87
CPSF1-203ENST00000527916 ACKR4Q9NPB9 350 aa9.63□□□□□ -0.87
CPSF1-203ENST00000527916 FARSBQ9NSD9 589 aaKnown RBP9.63□□□□□ -0.87
CPSF1-203ENST00000527916 TUBA8Q9NY65 449 aaPredicted RBP9.63□□□□□ -0.87
CPSF1-203ENST00000527916 VPS29Q9UBQ0 182 aa9.63□□□□□ -0.87
CPSF1-203ENST00000527916 DCDC2Q9UHG0 476 aa9.63□□□□□ -0.87
CPSF1-203ENST00000527916 PSME2Q9UL46 239 aa9.63□□□□□ -0.87
CPSF1-203ENST00000527916 BOKQ9UMX3 212 aaPredicted RBP9.63□□□□□ -0.87
CPSF1-203ENST00000527916 SLC12A4Q9UP95 1085 aa9.63□□□□□ -0.87
CPSF1-203ENST00000527916 CHCHD2Q9Y6H1 151 aaPredicted RBP9.63□□□□□ -0.87
CPSF1-203ENST00000527916 EXPH5Q8NEV8 1989 aa9.63□□□□□ -0.87
CPSF1-203ENST00000527916 GOLGA6L10A6NI86 522 aa9.62□□□□□ -0.87
CPSF1-203ENST00000527916 ULK1O75385 1050 aa9.62□□□□□ -0.87
CPSF1-203ENST00000527916 OR4F21O95013 312 aa9.62□□□□□ -0.87
CPSF1-203ENST00000527916 IFNA2P01563 188 aa9.62□□□□□ -0.87
CPSF1-203ENST00000527916 KRT6AP02538 564 aa9.62□□□□□ -0.87
CPSF1-203ENST00000527916 KRT6BP04259 564 aa9.62□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 24.1 ms