RNA–Protein interactions for RNA: ENST00000527817.1

SRPRA-202, Transcript of SRP receptor subunit alpha, humanhuman

TSL 2

Gene SRPRA, Length 687 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRPRA-202ENST00000527817 HP1BP3Q5SSJ5 553 aaPredicted RBP11.13□□□□□ -0.63
SRPRA-202ENST00000527817 VWA1Q6PCB0 445 aa11.13□□□□□ -0.63
SRPRA-202ENST00000527817 C22orf34Q6ZV56 151 aa11.13□□□□□ -0.63
SRPRA-202ENST00000527817 LRRC70Q7Z2Q7 622 aa11.13□□□□□ -0.63
SRPRA-202ENST00000527817 MILR1Q7Z6M3 343 aa11.13□□□□□ -0.63
SRPRA-202ENST00000527817 IFNEQ86WN2 208 aa11.13□□□□□ -0.63
SRPRA-202ENST00000527817 GALNT12Q8IXK2 581 aa11.13□□□□□ -0.63
SRPRA-202ENST00000527817 RNF175Q8N4F7 328 aa11.13□□□□□ -0.63
SRPRA-202ENST00000527817 SPATA6LQ8N4H0 392 aa11.13□□□□□ -0.63
SRPRA-202ENST00000527817 HUS1BQ8NHY5 278 aa11.13□□□□□ -0.63
SRPRA-202ENST00000527817 CAVIN3Q969G5 261 aa11.13□□□□□ -0.63
SRPRA-202ENST00000527817 PIGQQ9BRB3 760 aa11.13□□□□□ -0.63
SRPRA-202ENST00000527817 OSBPL11Q9BXB4 747 aa11.13□□□□□ -0.63
SRPRA-202ENST00000527817 ZNF717Q9BY31 904 aaPredicted RBP11.13□□□□□ -0.63
SRPRA-202ENST00000527817 NXF5Q9H1B4 397 aaKnown RBP11.13□□□□□ -0.63
SRPRA-202ENST00000527817 RHOJQ9H4E5 214 aa11.13□□□□□ -0.63
SRPRA-202ENST00000527817 NSMCE4AQ9NXX6 385 aa11.13□□□□□ -0.63
SRPRA-202ENST00000527817 PSD3Q9NYI0 1048 aa11.13□□□□□ -0.63
SRPRA-202ENST00000527817 TAS2R10Q9NYW0 307 aa11.13□□□□□ -0.63
SRPRA-202ENST00000527817 MOCS1Q9NZB8 636 aa11.13□□□□□ -0.63
SRPRA-202ENST00000527817 CHMP2BQ9UQN3 213 aa11.13□□□□□ -0.63
SRPRA-202ENST00000527817 EXPH5Q8NEV8 1989 aa11.13□□□□□ -0.63
SRPRA-202ENST00000527817 A0A0A6YYD5 115 aa11.12□□□□□ -0.63
SRPRA-202ENST00000527817 FRG2CA6NGY1 282 aa11.12□□□□□ -0.63
SRPRA-202ENST00000527817 PGRMC2O15173 223 aa11.12□□□□□ -0.63
SRPRA-202ENST00000527817 KLF4O43474 513 aa11.12□□□□□ -0.63
SRPRA-202ENST00000527817 TMPRSS11DO60235 418 aa11.12□□□□□ -0.63
SRPRA-202ENST00000527817 EEDO75530 441 aaKnown RBP11.12□□□□□ -0.63
SRPRA-202ENST00000527817 F12P00748 615 aaPredicted RBP11.12□□□□□ -0.63
SRPRA-202ENST00000527817 NR2F6P10588 404 aa11.12□□□□□ -0.63
SRPRA-202ENST00000527817 NID1P14543 1247 aa11.12□□□□□ -0.63
SRPRA-202ENST00000527817 CD1DP15813 335 aa11.12□□□□□ -0.63
SRPRA-202ENST00000527817 TBXA2RP21731 343 aa11.12□□□□□ -0.63
SRPRA-202ENST00000527817 GPX3P22352 226 aa11.12□□□□□ -0.63
SRPRA-202ENST00000527817 PIK3R1P27986 724 aa11.12□□□□□ -0.63
SRPRA-202ENST00000527817 CCKARP32238 428 aa11.12□□□□□ -0.63
SRPRA-202ENST00000527817 SLC12A2P55011 1212 aa11.12□□□□□ -0.63
SRPRA-202ENST00000527817 DESI1Q6ICB0 168 aa11.12□□□□□ -0.63
SRPRA-202ENST00000527817 GRHL2Q6ISB3 625 aa11.12□□□□□ -0.63
SRPRA-202ENST00000527817 CYP20A1Q6UW02 462 aa11.12□□□□□ -0.63
SRPRA-202ENST00000527817 ZNF550Q7Z398 422 aa11.12□□□□□ -0.63
SRPRA-202ENST00000527817 P4HA3Q7Z4N8 544 aa11.12□□□□□ -0.63
SRPRA-202ENST00000527817 PLCZ1Q86YW0 608 aa11.12□□□□□ -0.63
SRPRA-202ENST00000527817 CNEP1R1Q8N9A8 125 aa11.12□□□□□ -0.63
SRPRA-202ENST00000527817 RDH11Q8TC12 318 aa11.12□□□□□ -0.63
SRPRA-202ENST00000527817 DTNBP1Q96EV8 351 aa11.12□□□□□ -0.63
SRPRA-202ENST00000527817 OPN3Q9H1Y3 402 aaPredicted RBP11.12□□□□□ -0.63
SRPRA-202ENST00000527817 GALNT9Q9HCQ5 603 aa11.12□□□□□ -0.63
SRPRA-202ENST00000527817 CFL2Q9Y281 166 aa11.12□□□□□ -0.63
SRPRA-202ENST00000527817 PRR14LQ5THK1 2151 aa11.11□□□□□ -0.63
SRPRA-202ENST00000527817 A0A1W2PS29 197 aa11.11□□□□□ -0.63
SRPRA-202ENST00000527817 ACOX3O15254 700 aa11.11□□□□□ -0.63
SRPRA-202ENST00000527817 EMC8O43402 210 aa11.11□□□□□ -0.63
SRPRA-202ENST00000527817 ZIC3O60481 467 aa11.11□□□□□ -0.63
SRPRA-202ENST00000527817 CD8BP10966 210 aa11.11□□□□□ -0.63
SRPRA-202ENST00000527817 CDC25BP30305 580 aa11.11□□□□□ -0.63
SRPRA-202ENST00000527817 XKP51811 444 aa11.11□□□□□ -0.63
SRPRA-202ENST00000527817 CUL3Q13618 768 aa11.11□□□□□ -0.63
SRPRA-202ENST00000527817 DDX39BQ13838 428 aaKnown RBP11.11□□□□□ -0.63
SRPRA-202ENST00000527817 FGFBP1Q14512 234 aa11.11□□□□□ -0.63
SRPRA-202ENST00000527817 MORF4L2Q15014 288 aa11.11□□□□□ -0.63
SRPRA-202ENST00000527817 BEX5Q5H9J7 111 aa11.11□□□□□ -0.63
SRPRA-202ENST00000527817 CHMP1BQ7LBR1 199 aa11.11□□□□□ -0.63
SRPRA-202ENST00000527817 ZNF611Q8N823 705 aa11.11□□□□□ -0.63
SRPRA-202ENST00000527817 SPC24Q8NBT2 197 aa11.11□□□□□ -0.63
SRPRA-202ENST00000527817 OR4K14Q8NGD5 310 aa11.11□□□□□ -0.63
SRPRA-202ENST00000527817 REPS1Q96D71 796 aa11.11□□□□□ -0.63
SRPRA-202ENST00000527817 OMA1Q96E52 524 aa11.11□□□□□ -0.63
SRPRA-202ENST00000527817 TSPAN17Q96FV3 270 aa11.11□□□□□ -0.63
SRPRA-202ENST00000527817 ZC3HAV1LQ96H79 300 aaKnown RBP11.11□□□□□ -0.63
SRPRA-202ENST00000527817 ZNF845Q96IR2 970 aaPredicted RBP11.11□□□□□ -0.63
SRPRA-202ENST00000527817 LCORQ96JN0 433 aaPredicted RBP11.11□□□□□ -0.63
SRPRA-202ENST00000527817 UBXN10Q96LJ8 280 aa11.11□□□□□ -0.63
SRPRA-202ENST00000527817 MTERF1Q99551 399 aaKnown RBP11.11□□□□□ -0.63
SRPRA-202ENST00000527817 REG4Q9BYZ8 158 aa11.11□□□□□ -0.63
SRPRA-202ENST00000527817 KLRF1Q9NZS2 232 aa11.11□□□□□ -0.63
SRPRA-202ENST00000527817 ASIC3Q9UHC3 531 aa11.11□□□□□ -0.63
SRPRA-202ENST00000527817 DTX4Q9Y2E6 619 aa11.11□□□□□ -0.63
SRPRA-202ENST00000527817 MTO1Q9Y2Z2 717 aaKnown RBP11.11□□□□□ -0.63
SRPRA-202ENST00000527817 PCDHGA11Q9Y5H2 935 aa11.11□□□□□ -0.63
SRPRA-202ENST00000527817 ANK2Q01484 3957 aa11.1□□□□□ -0.63
SRPRA-202ENST00000527817 A0A087X1B8 175 aa11.1□□□□□ -0.63
SRPRA-202ENST00000527817 PRAMEF25A6NGN4 478 aa11.1□□□□□ -0.63
SRPRA-202ENST00000527817 SLC22A20A6NK97 555 aa11.1□□□□□ -0.63
SRPRA-202ENST00000527817 RNF223E7ERA6 249 aa11.1□□□□□ -0.63
SRPRA-202ENST00000527817 K7EPI3 171 aa11.1□□□□□ -0.63
SRPRA-202ENST00000527817 PGRMC1O00264 195 aaKnown RBP11.1□□□□□ -0.63
SRPRA-202ENST00000527817 CD5LO43866 347 aa11.1□□□□□ -0.63
SRPRA-202ENST00000527817 UGT2B11O75310 529 aa11.1□□□□□ -0.63
SRPRA-202ENST00000527817 TNFRSF21O75509 655 aa11.1□□□□□ -0.63
SRPRA-202ENST00000527817 S100BP04271 92 aaPredicted RBP11.1□□□□□ -0.63
SRPRA-202ENST00000527817 TP53P04637 393 aaPredicted RBP11.1□□□□□ -0.63
SRPRA-202ENST00000527817 THBDP07204 575 aa11.1□□□□□ -0.63
SRPRA-202ENST00000527817 PEPDP12955 493 aa11.1□□□□□ -0.63
SRPRA-202ENST00000527817 PPP3CBP16298 524 aa11.1□□□□□ -0.63
SRPRA-202ENST00000527817 PORP16435 677 aaPredicted RBP11.1□□□□□ -0.63
SRPRA-202ENST00000527817 KCNJ5P48544 419 aa11.1□□□□□ -0.63
SRPRA-202ENST00000527817 NR1H2P55055 460 aa11.1□□□□□ -0.63
SRPRA-202ENST00000527817 HMGCS1Q01581 520 aa11.1□□□□□ -0.63
SRPRA-202ENST00000527817 MGAT2Q10469 447 aa11.1□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 22.1 ms