RNA–Protein interactions for RNA: ENST00000527720.5

USH1C-207, Transcript of USH1 protein network component harmonin, humanhuman

TSL 1 (best) BASIC

Gene USH1C, Length 2,278 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USH1C-207ENST00000527720 TNFRSF10CO14798 259 aa14.43□□□□□ -0.1
USH1C-207ENST00000527720 MMP11P24347 488 aa14.43□□□□□ -0.1
USH1C-207ENST00000527720 GRK5P34947 590 aa14.43□□□□□ -0.1
USH1C-207ENST00000527720 BUD31P41223 144 aaPredicted RBP14.43□□□□□ -0.1
USH1C-207ENST00000527720 KIR2DS3Q14952 304 aa14.43□□□□□ -0.1
USH1C-207ENST00000527720 ZNF750Q32MQ0 723 aa14.43□□□□□ -0.1
USH1C-207ENST00000527720 VN1R4Q7Z5H5 301 aa14.43□□□□□ -0.1
USH1C-207ENST00000527720 FAM26EQ8N5C1 309 aa14.43□□□□□ -0.1
USH1C-207ENST00000527720 SNRNP27Q8WVK2 155 aaKnown RBP14.43□□□□□ -0.1
USH1C-207ENST00000527720 RIPOR3Q96MK2 946 aa14.43□□□□□ -0.1
USH1C-207ENST00000527720 YIPF4Q9BSR8 244 aa14.43□□□□□ -0.1
USH1C-207ENST00000527720 TAPBPLQ9BX59 468 aa14.43□□□□□ -0.1
USH1C-207ENST00000527720 ACTRT3Q9BYD9 372 aa14.43□□□□□ -0.1
USH1C-207ENST00000527720 S1PR5Q9H228 398 aa14.43□□□□□ -0.1
USH1C-207ENST00000527720 OR51E2Q9H255 320 aa14.43□□□□□ -0.1
USH1C-207ENST00000527720 SRMSQ9H3Y6 488 aa14.43□□□□□ -0.1
USH1C-207ENST00000527720 ANKRD19PQ9H560 264 aa14.43□□□□□ -0.1
USH1C-207ENST00000527720 TRIM45Q9H8W5 580 aaPredicted RBP14.43□□□□□ -0.1
USH1C-207ENST00000527720 SYNPO2LQ9H987 977 aa14.43□□□□□ -0.1
USH1C-207ENST00000527720 NTMQ9P121 344 aa14.43□□□□□ -0.1
USH1C-207ENST00000527720 PHF11Q9UIL8 331 aa14.43□□□□□ -0.1
USH1C-207ENST00000527720 DUXAA6NLW8 204 aa14.43□□□□□ -0.1
USH1C-207ENST00000527720 AGR2O95994 175 aa14.43□□□□□ -0.1
USH1C-207ENST00000527720 ALPPP05187 535 aa14.43□□□□□ -0.1
USH1C-207ENST00000527720 ALOX5P09917 674 aa14.43□□□□□ -0.1
USH1C-207ENST00000527720 SLC35G6P0C7Q6 338 aa14.43□□□□□ -0.1
USH1C-207ENST00000527720 HSMCR30P0CW71 290 aa14.43□□□□□ -0.1
USH1C-207ENST00000527720 C8orf89P0DMQ9 161 aa14.43□□□□□ -0.1
USH1C-207ENST00000527720 ALPPL2P10696 532 aa14.43□□□□□ -0.1
USH1C-207ENST00000527720 CTHP32929 405 aa14.43□□□□□ -0.1
USH1C-207ENST00000527720 PSMD7P51665 324 aa14.43□□□□□ -0.1
USH1C-207ENST00000527720 BTN3A2P78410 334 aa14.43□□□□□ -0.1
USH1C-207ENST00000527720 ATAD3BQ5T9A4 648 aa14.43□□□□□ -0.1
USH1C-207ENST00000527720 ZER1Q7Z7L7 766 aa14.43□□□□□ -0.1
USH1C-207ENST00000527720 TRIM69Q86WT6 500 aa14.43□□□□□ -0.1
USH1C-207ENST00000527720 C16orf58Q96GQ5 468 aa14.43□□□□□ -0.1
USH1C-207ENST00000527720 OR5M11Q96RB7 305 aa14.43□□□□□ -0.1
USH1C-207ENST00000527720 ARHGDIGQ99819 225 aa14.43□□□□□ -0.1
USH1C-207ENST00000527720 SLC38A1Q9H2H9 487 aa14.43□□□□□ -0.1
USH1C-207ENST00000527720 DNAAF2Q9NVR5 837 aaKnown RBP14.43□□□□□ -0.1
USH1C-207ENST00000527720 ZNF624Q9P2J8 865 aaPredicted RBP14.43□□□□□ -0.1
USH1C-207ENST00000527720 MSRAQ9UJ68 235 aa14.43□□□□□ -0.1
USH1C-207ENST00000527720 LOC100506127A0A0U1RQW1 187 aa14.42□□□□□ -0.1
USH1C-207ENST00000527720 GSAPA4D1B5 854 aa14.42□□□□□ -0.1
USH1C-207ENST00000527720 TNFSF14O43557 240 aa14.42□□□□□ -0.1
USH1C-207ENST00000527720 SCG5P05408 212 aa14.42□□□□□ -0.1
USH1C-207ENST00000527720 IFNGR2P38484 337 aa14.42□□□□□ -0.1
USH1C-207ENST00000527720 MC3RP41968 323 aa14.42□□□□□ -0.1
USH1C-207ENST00000527720 INAVAQ3KP66 663 aa14.42□□□□□ -0.1
USH1C-207ENST00000527720 ZNF311Q5JNZ3 666 aa14.42□□□□□ -0.1
USH1C-207ENST00000527720 ATCAYQ86WG3 371 aa14.42□□□□□ -0.1
USH1C-207ENST00000527720 OR9A2Q8NGT5 310 aa14.42□□□□□ -0.1
USH1C-207ENST00000527720 TM4SF19Q96DZ7 209 aa14.42□□□□□ -0.1
USH1C-207ENST00000527720 C10orf90Q96M02 699 aa14.42□□□□□ -0.1
USH1C-207ENST00000527720 MND1Q9BWT6 205 aa14.42□□□□□ -0.1
USH1C-207ENST00000527720 TAS2R16Q9NYV7 291 aa14.42□□□□□ -0.1
USH1C-207ENST00000527720 ANKMY1Q9P2S6 941 aa14.42□□□□□ -0.1
USH1C-207ENST00000527720 SLC13A4Q9UKG4 626 aa14.42□□□□□ -0.1
USH1C-207ENST00000527720 KLHL20Q9Y2M5 609 aa14.42□□□□□ -0.1
USH1C-207ENST00000527720 LSM2Q9Y333 95 aaKnown RBP14.42□□□□□ -0.1
USH1C-207ENST00000527720 COL4A2P08572 1712 aa14.42□□□□□ -0.1
USH1C-207ENST00000527720 GIMAP1-GIMAP5A0A087WTJ2 511 aa14.41□□□□□ -0.1
USH1C-207ENST00000527720 URADA6NGE7 173 aa14.41□□□□□ -0.1
USH1C-207ENST00000527720 SAGE2PA6NJ88 616 aa14.41□□□□□ -0.1
USH1C-207ENST00000527720 BTN3A3O00478 584 aa14.41□□□□□ -0.1
USH1C-207ENST00000527720 DSCR3O14972 297 aa14.41□□□□□ -0.1
USH1C-207ENST00000527720 SCAMP1O15126 338 aa14.41□□□□□ -0.1
USH1C-207ENST00000527720 EML2O95834 649 aa14.41□□□□□ -0.1
USH1C-207ENST00000527720 EGFP01133 1207 aa14.41□□□□□ -0.1
USH1C-207ENST00000527720 IGFBP1P08833 259 aaPredicted RBP14.41□□□□□ -0.1
USH1C-207ENST00000527720 ADRA2AP08913 450 aa14.41□□□□□ -0.1
USH1C-207ENST00000527720 DBTP11182 482 aaKnown RBP14.41□□□□□ -0.1
USH1C-207ENST00000527720 ACADMP11310 421 aa14.41□□□□□ -0.1
USH1C-207ENST00000527720 TNNI3P19429 210 aa14.41□□□□□ -0.1
USH1C-207ENST00000527720 AK4P27144 223 aaPredicted RBP14.41□□□□□ -0.1
USH1C-207ENST00000527720 PRKAR1BP31321 381 aa14.41□□□□□ -0.1
USH1C-207ENST00000527720 IFNA8P32881 189 aa14.41□□□□□ -0.1
USH1C-207ENST00000527720 PCYT1AP49585 367 aa14.41□□□□□ -0.1
USH1C-207ENST00000527720 DGKEP52429 567 aa14.41□□□□□ -0.1
USH1C-207ENST00000527720 CLDN2P57739 230 aa14.41□□□□□ -0.1
USH1C-207ENST00000527720 CDK5Q00535 292 aa14.41□□□□□ -0.1
USH1C-207ENST00000527720 TNFRSF17Q02223 184 aa14.41□□□□□ -0.1
USH1C-207ENST00000527720 SUZ12Q15022 739 aaKnown RBP14.41□□□□□ -0.1
USH1C-207ENST00000527720 RAB30Q15771 203 aa14.41□□□□□ -0.1
USH1C-207ENST00000527720 TSTQ16762 297 aaKnown RBP14.41□□□□□ -0.1
USH1C-207ENST00000527720 TBC1D25Q3MII6 688 aa14.41□□□□□ -0.1
USH1C-207ENST00000527720 GDPGP1Q6ZNW5 385 aa14.41□□□□□ -0.1
USH1C-207ENST00000527720 IQCHQ86VS3 1027 aa14.41□□□□□ -0.1
USH1C-207ENST00000527720 TCEANCQ8N8B7 351 aa14.41□□□□□ -0.1
USH1C-207ENST00000527720 KCT2Q8NC54 265 aa14.41□□□□□ -0.1
USH1C-207ENST00000527720 JPH3Q8WXH2 748 aaPredicted RBP14.41□□□□□ -0.1
USH1C-207ENST00000527720 GIMAP5Q96F15 307 aa14.41□□□□□ -0.1
USH1C-207ENST00000527720 OTUB1Q96FW1 271 aaPredicted RBP14.41□□□□□ -0.1
USH1C-207ENST00000527720 SERINC2Q96SA4 455 aa14.41□□□□□ -0.1
USH1C-207ENST00000527720 CHCHD6Q9BRQ6 235 aa14.41□□□□□ -0.1
USH1C-207ENST00000527720 CDADC1Q9BWV3 514 aa14.41□□□□□ -0.1
USH1C-207ENST00000527720 DNAJC27Q9NZQ0 273 aa14.41□□□□□ -0.1
USH1C-207ENST00000527720 ISPDA4D126 451 aa14.41□□□□□ -0.1
USH1C-207ENST00000527720 AGAP5A6NIR3 686 aa14.41□□□□□ -0.1
USH1C-207ENST00000527720 ARHGAP33O14559 1287 aa14.41□□□□□ -0.1
Retrieved 100 of 20,778 RNA–protein pairs in 73.3 ms