RNA–Protein interactions for RNA: ENST00000527326.1

CD44-225, Transcript of CD44 molecule (Indian blood group), humanhuman

TSL 2

Gene CD44, Length 718 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-225ENST00000527326 CIR1Q86X95 450 aaPredicted RBP5.51□□□□□ -1.53
CD44-225ENST00000527326 CBLN2Q8IUK8 224 aa5.51□□□□□ -1.53
CD44-225ENST00000527326 SERPINA12Q8IW75 414 aa5.51□□□□□ -1.53
CD44-225ENST00000527326 SHISA5Q8N114 240 aa5.51□□□□□ -1.53
CD44-225ENST00000527326 FSTL5Q8N475 847 aaPredicted RBP5.51□□□□□ -1.53
CD44-225ENST00000527326 PLA2G15Q8NCC3 412 aa5.51□□□□□ -1.53
CD44-225ENST00000527326 BEND2Q8NDZ0 799 aa5.51□□□□□ -1.53
CD44-225ENST00000527326 DENND6BQ8NEG7 585 aa5.51□□□□□ -1.53
CD44-225ENST00000527326 OR56A4Q8NGH8 313 aa5.51□□□□□ -1.53
CD44-225ENST00000527326 OR2L8Q8NGY9 312 aa5.51□□□□□ -1.53
CD44-225ENST00000527326 HUS1BQ8NHY5 278 aa5.51□□□□□ -1.53
CD44-225ENST00000527326 ZNF384Q8TF68 577 aa5.51□□□□□ -1.53
CD44-225ENST00000527326 CENPIQ92674 756 aaPredicted RBP5.51□□□□□ -1.53
CD44-225ENST00000527326 NKD1Q969G9 470 aa5.51□□□□□ -1.53
CD44-225ENST00000527326 RHBDF1Q96CC6 855 aa5.51□□□□□ -1.53
CD44-225ENST00000527326 ACSF2Q96CM8 615 aaPredicted RBP5.51□□□□□ -1.53
CD44-225ENST00000527326 RAB3CQ96E17 227 aa5.51□□□□□ -1.53
CD44-225ENST00000527326 ELMOD3Q96FG2 381 aa5.51□□□□□ -1.53
CD44-225ENST00000527326 BSCL2Q96G97 398 aaPredicted RBP5.51□□□□□ -1.53
CD44-225ENST00000527326 SHDQ96IW2 340 aa5.51□□□□□ -1.53
CD44-225ENST00000527326 LCORQ96JN0 433 aaPredicted RBP5.51□□□□□ -1.53
CD44-225ENST00000527326 HRASLS5Q96KN8 279 aa5.51□□□□□ -1.53
CD44-225ENST00000527326 RPL10LQ96L21 214 aaKnown RBP5.51□□□□□ -1.53
CD44-225ENST00000527326 ZNF354BQ96LW1 612 aa5.51□□□□□ -1.53
CD44-225ENST00000527326 RNF157Q96PX1 679 aa5.51□□□□□ -1.53
CD44-225ENST00000527326 TEFMQ96QE5 360 aaKnown RBP5.51□□□□□ -1.53
CD44-225ENST00000527326 C7orf50Q9BRJ6 194 aaKnown RBP5.51□□□□□ -1.53
CD44-225ENST00000527326 GINS4Q9BRT9 223 aa5.51□□□□□ -1.53
CD44-225ENST00000527326 RHNO1Q9BSD3 238 aa5.51□□□□□ -1.53
CD44-225ENST00000527326 SYT17Q9BSW7 474 aa5.51□□□□□ -1.53
CD44-225ENST00000527326 GABARAPL3Q9BY60 117 aa5.51□□□□□ -1.53
CD44-225ENST00000527326 XYLT2Q9H1B5 865 aa5.51□□□□□ -1.53
CD44-225ENST00000527326 OR51B6Q9H340 312 aa5.51□□□□□ -1.53
CD44-225ENST00000527326 GAL3ST2Q9H3Q3 398 aa5.51□□□□□ -1.53
CD44-225ENST00000527326 ST6GALNAC4Q9H4F1 302 aa5.51□□□□□ -1.53
CD44-225ENST00000527326 POMKQ9H5K3 350 aa5.51□□□□□ -1.53
CD44-225ENST00000527326 WDR26Q9H7D7 661 aa5.51□□□□□ -1.53
CD44-225ENST00000527326 CERS4Q9HA82 394 aa5.51□□□□□ -1.53
CD44-225ENST00000527326 BCO1Q9HAY6 547 aa5.51□□□□□ -1.53
CD44-225ENST00000527326 CACYBPQ9HB71 228 aaKnown RBP5.51□□□□□ -1.53
CD44-225ENST00000527326 DCP1AQ9NPI6 582 aaPredicted RBP5.51□□□□□ -1.53
CD44-225ENST00000527326 CTPS2Q9NRF8 586 aa5.51□□□□□ -1.53
CD44-225ENST00000527326 RAD18Q9NS91 495 aa5.51□□□□□ -1.53
CD44-225ENST00000527326 TEX10Q9NXF1 929 aaPredicted RBP5.51□□□□□ -1.53
CD44-225ENST00000527326 TAS2R3Q9NYW6 316 aa5.51□□□□□ -1.53
CD44-225ENST00000527326 VAPAQ9P0L0 249 aa5.51□□□□□ -1.53
CD44-225ENST00000527326 COX16Q9P0S2 106 aa5.51□□□□□ -1.53
CD44-225ENST00000527326 SLC17A6Q9P2U8 582 aa5.51□□□□□ -1.53
CD44-225ENST00000527326 OR12D3Q9UGF7 316 aa5.51□□□□□ -1.53
CD44-225ENST00000527326 EIF2B4Q9UI10 523 aaKnown RBP5.51□□□□□ -1.53
CD44-225ENST00000527326 MRTO4Q9UKD2 239 aaKnown RBP5.51□□□□□ -1.53
CD44-225ENST00000527326 ZNF490Q9ULM2 529 aaPredicted RBP5.51□□□□□ -1.53
CD44-225ENST00000527326 PPT2Q9UMR5 302 aa5.51□□□□□ -1.53
CD44-225ENST00000527326 ADAMTS5Q9UNA0 930 aa5.51□□□□□ -1.53
CD44-225ENST00000527326 WASF3Q9UPY6 502 aa5.51□□□□□ -1.53
CD44-225ENST00000527326 GOLT1BQ9Y3E0 138 aa5.51□□□□□ -1.53
CD44-225ENST00000527326 TMEM184BQ9Y519 407 aaPredicted RBP5.51□□□□□ -1.53
CD44-225ENST00000527326 PCDHGA6Q9Y5G7 932 aa5.51□□□□□ -1.53
CD44-225ENST00000527326 PCDHGA5Q9Y5G8 931 aa5.51□□□□□ -1.53
CD44-225ENST00000527326 PCDHGA1Q9Y5H4 931 aa5.51□□□□□ -1.53
CD44-225ENST00000527326 PCDHA10Q9Y5I2 948 aa5.51□□□□□ -1.53
CD44-225ENST00000527326 GPR45Q9Y5Y3 372 aa5.51□□□□□ -1.53
CD44-225ENST00000527326 CACNA1SQ13698 1873 aa5.51□□□□□ -1.53
CD44-225ENST00000527326 COL18A1P39060 1754 aa5.5□□□□□ -1.53
CD44-225ENST00000527326 DENND4AQ7Z401 1863 aa5.5□□□□□ -1.53
CD44-225ENST00000527326 ZFC3H1O60293 1989 aaKnown RBP5.5□□□□□ -1.53
CD44-225ENST00000527326 C2orf92A0A1B0GVN3 265 aa5.5□□□□□ -1.53
CD44-225ENST00000527326 A0A1W2PRB8 838 aa5.5□□□□□ -1.53
CD44-225ENST00000527326 NEMP2A6NFY4 417 aa5.5□□□□□ -1.53
CD44-225ENST00000527326 GLTPD2A6NH11 291 aa5.5□□□□□ -1.53
CD44-225ENST00000527326 HMSDA8MTL9 139 aa5.5□□□□□ -1.53
CD44-225ENST00000527326 MCRIP1C9JLW8 97 aa5.5□□□□□ -1.53
CD44-225ENST00000527326 M0QYT0 321 aa5.5□□□□□ -1.53
CD44-225ENST00000527326 M0QZK8 103 aa5.5□□□□□ -1.53
CD44-225ENST00000527326 BCAT2O15382 392 aaPredicted RBP5.5□□□□□ -1.53
CD44-225ENST00000527326 SSNA1O43805 119 aa5.5□□□□□ -1.53
CD44-225ENST00000527326 SLC28A2O43868 658 aa5.5□□□□□ -1.53
CD44-225ENST00000527326 TRUB2O95900 331 aaKnown RBP5.5□□□□□ -1.53
CD44-225ENST00000527326 C1RP00736 705 aa5.5□□□□□ -1.53
CD44-225ENST00000527326 STAG3L1P0CL83 205 aa5.5□□□□□ -1.53
CD44-225ENST00000527326 PIPP12273 146 aaPredicted RBP5.5□□□□□ -1.53
CD44-225ENST00000527326 PAX1P15863 534 aa5.5□□□□□ -1.53
CD44-225ENST00000527326 HIST1H1BP16401 226 aaKnown RBP5.5□□□□□ -1.53
CD44-225ENST00000527326 PFKLP17858 780 aa5.5□□□□□ -1.53
CD44-225ENST00000527326 RCC1P18754 421 aaPredicted RBP5.5□□□□□ -1.53
CD44-225ENST00000527326 CXCL2P19875 107 aa5.5□□□□□ -1.53
CD44-225ENST00000527326 AKAP5P24588 427 aa5.5□□□□□ -1.53
CD44-225ENST00000527326 MGAT1P26572 445 aa5.5□□□□□ -1.53
CD44-225ENST00000527326 APEX1P27695 318 aaKnown RBP5.5□□□□□ -1.53
CD44-225ENST00000527326 HTR2AP28223 471 aa5.5□□□□□ -1.53
CD44-225ENST00000527326 ABCD3P28288 659 aa5.5□□□□□ -1.53
CD44-225ENST00000527326 S100A2P29034 98 aa5.5□□□□□ -1.53
CD44-225ENST00000527326 ADMP35318 185 aa5.5□□□□□ -1.53
CD44-225ENST00000527326 PPM1AP35813 382 aa5.5□□□□□ -1.53
CD44-225ENST00000527326 NNMTP40261 264 aa5.5□□□□□ -1.53
CD44-225ENST00000527326 OR1G1P47890 313 aa5.5□□□□□ -1.53
CD44-225ENST00000527326 RGS4P49798 205 aa5.5□□□□□ -1.53
CD44-225ENST00000527326 GMPSP49915 693 aaPredicted RBP5.5□□□□□ -1.53
CD44-225ENST00000527326 ZNF157P51786 506 aaPredicted RBP5.5□□□□□ -1.53
CD44-225ENST00000527326 AGFG1P52594 562 aaKnown RBP5.5□□□□□ -1.53
Retrieved 100 of 20,778 RNA–protein pairs in 66.3 ms