RNA–Protein interactions for RNA: ENST00000526191.1

COPB1-204, Transcript of coatomer protein complex subunit beta 1, humanhuman

TSL 2

Gene COPB1, Length 697 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPB1-204ENST00000526191 ITPR1Q14643 2758 aa4.26□□□□□ -1.73
COPB1-204ENST00000526191 COL4A2P08572 1712 aa4.26□□□□□ -1.73
COPB1-204ENST00000526191 ZNF638Q14966 1978 aaKnown RBP4.25□□□□□ -1.73
COPB1-204ENST00000526191 PLXNB3Q9ULL4 1909 aa4.25□□□□□ -1.73
COPB1-204ENST00000526191 IGLV3-10A0A075B6K4 115 aa4.25□□□□□ -1.73
COPB1-204ENST00000526191 SPAARA0A1B0GVQ0 90 aa4.25□□□□□ -1.73
COPB1-204ENST00000526191 MAST4O15021 2626 aa4.25□□□□□ -1.73
COPB1-204ENST00000526191 ADAM12O43184 909 aa4.25□□□□□ -1.73
COPB1-204ENST00000526191 STAM2O75886 525 aa4.25□□□□□ -1.73
COPB1-204ENST00000526191 PLEKHA8P1O95397 391 aa4.25□□□□□ -1.73
COPB1-204ENST00000526191 POP4O95707 220 aaKnown RBP4.25□□□□□ -1.73
COPB1-204ENST00000526191 C9P02748 559 aa4.25□□□□□ -1.73
COPB1-204ENST00000526191 RPN1P04843 607 aaKnown RBP4.25□□□□□ -1.73
COPB1-204ENST00000526191 HOXD4P09016 255 aaPredicted RBP4.25□□□□□ -1.73
COPB1-204ENST00000526191 DNAH10OSP0CZ25 163 aa4.25□□□□□ -1.73
COPB1-204ENST00000526191 FOLR2P14207 255 aa4.25□□□□□ -1.73
COPB1-204ENST00000526191 CCNE1P24864 410 aa4.25□□□□□ -1.73
COPB1-204ENST00000526191 KRTAP5-9P26371 169 aa4.25□□□□□ -1.73
COPB1-204ENST00000526191 DUTP33316 252 aaKnown RBP4.25□□□□□ -1.73
COPB1-204ENST00000526191 SFTPDP35247 375 aa4.25□□□□□ -1.73
COPB1-204ENST00000526191 CAPGP40121 348 aa4.25□□□□□ -1.73
COPB1-204ENST00000526191 CETN2P41208 172 aa4.25□□□□□ -1.73
COPB1-204ENST00000526191 CXCL12P48061 93 aa4.25□□□□□ -1.73
COPB1-204ENST00000526191 GPC3P51654 580 aa4.25□□□□□ -1.73
COPB1-204ENST00000526191 ROR1Q01973 937 aa4.25□□□□□ -1.73
COPB1-204ENST00000526191 DHODHQ02127 395 aa4.25□□□□□ -1.73
COPB1-204ENST00000526191 GIT2Q14161 759 aa4.25□□□□□ -1.73
COPB1-204ENST00000526191 ZRANB3Q5FWF4 1079 aa4.25□□□□□ -1.73
COPB1-204ENST00000526191 TTC27Q6P3X3 843 aa4.25□□□□□ -1.73
COPB1-204ENST00000526191 CYB5D1Q6P9G0 228 aa4.25□□□□□ -1.73
COPB1-204ENST00000526191 SHQ1Q6PI26 577 aaKnown RBP4.25□□□□□ -1.73
COPB1-204ENST00000526191 LCLAT1Q6UWP7 414 aa4.25□□□□□ -1.73
COPB1-204ENST00000526191 CWC27Q6UX04 472 aaKnown RBP4.25□□□□□ -1.73
COPB1-204ENST00000526191 CPEB2Q7Z5Q1 589 aaKnown RBP4.25□□□□□ -1.73
COPB1-204ENST00000526191 FAM131BQ86XD5 332 aa4.25□□□□□ -1.73
COPB1-204ENST00000526191 DEFB124Q8NES8 71 aa4.25□□□□□ -1.73
COPB1-204ENST00000526191 SLC26A7Q8TE54 656 aa4.25□□□□□ -1.73
COPB1-204ENST00000526191 RIT1Q92963 219 aa4.25□□□□□ -1.73
COPB1-204ENST00000526191 CLDN23Q96B33 292 aa4.25□□□□□ -1.73
COPB1-204ENST00000526191 ADPGKQ9BRR6 497 aa4.25□□□□□ -1.73
COPB1-204ENST00000526191 ANP32EQ9BTT0 268 aa4.25□□□□□ -1.73
COPB1-204ENST00000526191 THUMPD3Q9BV44 507 aaKnown RBP4.25□□□□□ -1.73
COPB1-204ENST00000526191 MRPL9Q9BYD2 267 aaKnown RBP4.25□□□□□ -1.73
COPB1-204ENST00000526191 PARLQ9H300 379 aa4.25□□□□□ -1.73
COPB1-204ENST00000526191 RNF41Q9H4P4 317 aaPredicted RBP4.25□□□□□ -1.73
COPB1-204ENST00000526191 RNF121Q9H920 327 aa4.25□□□□□ -1.73
COPB1-204ENST00000526191 PSTPIP2Q9H939 334 aa4.25□□□□□ -1.73
COPB1-204ENST00000526191 PRDM4Q9UKN5 801 aa4.25□□□□□ -1.73
COPB1-204ENST00000526191 ELF5Q9UKW6 265 aaPredicted RBP4.25□□□□□ -1.73
COPB1-204ENST00000526191 CDH7Q9ULB5 785 aa4.25□□□□□ -1.73
COPB1-204ENST00000526191 HES2Q9Y543 173 aa4.25□□□□□ -1.73
COPB1-204ENST00000526191 GON4LQ3T8J9 2241 aa4.25□□□□□ -1.73
COPB1-204ENST00000526191 ASXL3Q9C0F0 2248 aa4.25□□□□□ -1.73
COPB1-204ENST00000526191 CEP192Q8TEP8 1941 aa4.25□□□□□ -1.73
COPB1-204ENST00000526191 HELZ2Q9BYK8 2649 aaKnown RBP4.25□□□□□ -1.73
COPB1-204ENST00000526191 CACNA1EQ15878 2313 aa4.24□□□□□ -1.73
COPB1-204ENST00000526191 TTC41PQ6P2S7 1318 aa4.24□□□□□ -1.73
COPB1-204ENST00000526191 MYO16Q9Y6X6 1858 aa4.24□□□□□ -1.73
COPB1-204ENST00000526191 ASH1LQ9NR48 2969 aaKnown RBP4.24□□□□□ -1.73
COPB1-204ENST00000526191 PI4KAP42356 2102 aa4.24□□□□□ -1.73
COPB1-204ENST00000526191 SHISA9B4DS77 424 aa4.24□□□□□ -1.73
COPB1-204ENST00000526191 PRSS46E5RG02 174 aa4.24□□□□□ -1.73
COPB1-204ENST00000526191 IFIT3O14879 490 aaKnown RBP4.24□□□□□ -1.73
COPB1-204ENST00000526191 CHMP2AO43633 222 aa4.24□□□□□ -1.73
COPB1-204ENST00000526191 SELENOFO60613 162 aa4.24□□□□□ -1.73
COPB1-204ENST00000526191 SNAP91O60641 907 aa4.24□□□□□ -1.73
COPB1-204ENST00000526191 CCDC192P0DO97 292 aa4.24□□□□□ -1.73
COPB1-204ENST00000526191 GDI1P31150 447 aa4.24□□□□□ -1.73
COPB1-204ENST00000526191 IL10RBQ08334 325 aa4.24□□□□□ -1.73
COPB1-204ENST00000526191 SGCGQ13326 291 aa4.24□□□□□ -1.73
COPB1-204ENST00000526191 PTK6Q13882 451 aa4.24□□□□□ -1.73
COPB1-204ENST00000526191 PPM1LQ5SGD2 360 aa4.24□□□□□ -1.73
COPB1-204ENST00000526191 HECTD3Q5T447 861 aa4.24□□□□□ -1.73
COPB1-204ENST00000526191 CATSPER4Q7RTX7 472 aa4.24□□□□□ -1.73
COPB1-204ENST00000526191 GPR141Q7Z602 305 aa4.24□□□□□ -1.73
COPB1-204ENST00000526191 PIGWQ7Z7B1 504 aa4.24□□□□□ -1.73
COPB1-204ENST00000526191 CDR2LQ86X02 465 aaPredicted RBP4.24□□□□□ -1.73
COPB1-204ENST00000526191 MARCH9Q86YJ5 346 aa4.24□□□□□ -1.73
COPB1-204ENST00000526191 C11orf53Q8IXP5 236 aa4.24□□□□□ -1.73
COPB1-204ENST00000526191 OR4C15Q8NGM1 316 aa4.24□□□□□ -1.73
COPB1-204ENST00000526191 NCOA7Q8NI08 942 aa4.24□□□□□ -1.73
COPB1-204ENST00000526191 URGCPQ8TCY9 931 aa4.24□□□□□ -1.73
COPB1-204ENST00000526191 FAM3CQ92520 227 aa4.24□□□□□ -1.73
COPB1-204ENST00000526191 TCEAL4Q96EI5 215 aa4.24□□□□□ -1.73
COPB1-204ENST00000526191 RBM41Q96IZ5 413 aaKnown RBP4.24□□□□□ -1.73
COPB1-204ENST00000526191 AK8Q96MA6 479 aa4.24□□□□□ -1.73
COPB1-204ENST00000526191 EDEM2Q9BV94 578 aa4.24□□□□□ -1.73
COPB1-204ENST00000526191 EGLN3Q9H6Z9 239 aa4.24□□□□□ -1.73
COPB1-204ENST00000526191 DCTPP1Q9H773 170 aa4.24□□□□□ -1.73
COPB1-204ENST00000526191 HEXA-AS1Q9H8Q6 139 aa4.24□□□□□ -1.73
COPB1-204ENST00000526191 MTHFD2LQ9H903 347 aaPredicted RBP4.24□□□□□ -1.73
COPB1-204ENST00000526191 IARS2Q9NSE4 1012 aaKnown RBP4.24□□□□□ -1.73
COPB1-204ENST00000526191 IL36AQ9UHA7 158 aa4.24□□□□□ -1.73
COPB1-204ENST00000526191 LNPEPQ9UIQ6 1025 aa4.24□□□□□ -1.73
COPB1-204ENST00000526191 PILRBQ9UKJ0 227 aa4.24□□□□□ -1.73
COPB1-204ENST00000526191 KLK4Q9Y5K2 254 aa4.24□□□□□ -1.73
COPB1-204ENST00000526191 SELENOKQ9Y6D0 94 aa4.24□□□□□ -1.73
COPB1-204ENST00000526191 PCNX2A6NKB5 2137 aa4.24□□□□□ -1.73
COPB1-204ENST00000526191 IGHV4-30-2A0A087WSY4 118 aa4.23□□□□□ -1.73
COPB1-204ENST00000526191 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP4.23□□□□□ -1.73
Retrieved 100 of 20,778 RNA–protein pairs in 20.5 ms