RNA–Protein interactions for RNA: ENST00000526025.1

CD44-222, Transcript of CD44 molecule (Indian blood group), humanhuman

TSL 2 BASIC

Gene CD44, Length 1,052 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-222ENST00000526025 HBA1P69905 142 aa19.21■□□□□ 0.67
CD44-222ENST00000526025 ZCCHC12Q6PEW1 402 aa19.21■□□□□ 0.67
CD44-222ENST00000526025 BLOC1S3Q6QNY0 202 aa19.21■□□□□ 0.67
CD44-222ENST00000526025 CPLX4Q7Z7G2 160 aa19.21■□□□□ 0.67
CD44-222ENST00000526025 TAGAPQ8N103 731 aa19.21■□□□□ 0.67
CD44-222ENST00000526025 SIMC1Q8NDZ2 872 aa19.21■□□□□ 0.67
CD44-222ENST00000526025 OR56A1Q8NGH5 318 aa19.21■□□□□ 0.67
CD44-222ENST00000526025 OR9I1Q8NGQ6 314 aa19.21■□□□□ 0.67
CD44-222ENST00000526025 THAP3Q8WTV1 239 aaPredicted RBP19.21■□□□□ 0.67
CD44-222ENST00000526025 MS4A4EQ96PG1 132 aa19.21■□□□□ 0.67
CD44-222ENST00000526025 OR52E6Q96RD3 313 aa19.21■□□□□ 0.67
CD44-222ENST00000526025 GAL3ST4Q96RP7 486 aa19.21■□□□□ 0.67
CD44-222ENST00000526025 RASL10BQ96S79 203 aa19.21■□□□□ 0.67
CD44-222ENST00000526025 ZBTB20Q9HC78 741 aaPredicted RBP19.21■□□□□ 0.67
CD44-222ENST00000526025 OR5H15A6NDH6 313 aa19.2■□□□□ 0.66
CD44-222ENST00000526025 TO15178 435 aa19.2■□□□□ 0.66
CD44-222ENST00000526025 SHOX2O60902 331 aaPredicted RBP19.2■□□□□ 0.66
CD44-222ENST00000526025 OR2J2O76002 312 aa19.2■□□□□ 0.66
CD44-222ENST00000526025 WDPCPO95876 746 aa19.2■□□□□ 0.66
CD44-222ENST00000526025 ADSLP30566 484 aaPredicted RBP19.2■□□□□ 0.66
CD44-222ENST00000526025 HLCSP50747 726 aa19.2■□□□□ 0.66
CD44-222ENST00000526025 SSR4P51571 173 aa19.2■□□□□ 0.66
CD44-222ENST00000526025 DGKQP52824 942 aa19.2■□□□□ 0.66
CD44-222ENST00000526025 LY6DQ14210 128 aa19.2■□□□□ 0.66
CD44-222ENST00000526025 BHLHB9Q6PI77 547 aa19.2■□□□□ 0.66
CD44-222ENST00000526025 OPN5Q6U736 354 aa19.2■□□□□ 0.66
CD44-222ENST00000526025 FUNDC1Q8IVP5 155 aa19.2■□□□□ 0.66
CD44-222ENST00000526025 TSPEARQ8WU66 669 aa19.2■□□□□ 0.66
CD44-222ENST00000526025 FAM120BQ96EK7 910 aaKnown RBP19.2■□□□□ 0.66
CD44-222ENST00000526025 HSPBAP1Q96EW2 488 aa19.2■□□□□ 0.66
CD44-222ENST00000526025 LCORQ96JN0 433 aaPredicted RBP19.2■□□□□ 0.66
CD44-222ENST00000526025 UTP23Q9BRU9 249 aaKnown RBP19.2■□□□□ 0.66
CD44-222ENST00000526025 ITPAQ9BY32 194 aa19.2■□□□□ 0.66
CD44-222ENST00000526025 TRIM4Q9C037 500 aa19.2■□□□□ 0.66
CD44-222ENST00000526025 EPN3Q9H201 632 aa19.2■□□□□ 0.66
CD44-222ENST00000526025 RMND5AQ9H871 391 aa19.2■□□□□ 0.66
CD44-222ENST00000526025 FOLH1BQ9HBA9 442 aa19.2■□□□□ 0.66
CD44-222ENST00000526025 DTX4Q9Y2E6 619 aa19.2■□□□□ 0.66
CD44-222ENST00000526025 GPR55Q9Y2T6 319 aaPredicted RBP19.2■□□□□ 0.66
CD44-222ENST00000526025 GIMAP1-GIMAP5A0A087WTJ2 511 aa19.19■□□□□ 0.66
CD44-222ENST00000526025 FRG2CA6NGY1 282 aa19.19■□□□□ 0.66
CD44-222ENST00000526025 WWP2O00308 870 aa19.19■□□□□ 0.66
CD44-222ENST00000526025 SLC22A2O15244 555 aa19.19■□□□□ 0.66
CD44-222ENST00000526025 CFLARO15519 480 aa19.19■□□□□ 0.66
CD44-222ENST00000526025 SNX3O60493 162 aa19.19■□□□□ 0.66
CD44-222ENST00000526025 SOX30O94993 753 aa19.19■□□□□ 0.66
CD44-222ENST00000526025 NADKO95544 446 aaPredicted RBP19.19■□□□□ 0.66
CD44-222ENST00000526025 EFNA1P20827 205 aaPredicted RBP19.19■□□□□ 0.66
CD44-222ENST00000526025 CYB561P49447 251 aa19.19■□□□□ 0.66
CD44-222ENST00000526025 TNFSF10P50591 281 aa19.19■□□□□ 0.66
CD44-222ENST00000526025 KCNK10P57789 538 aa19.19■□□□□ 0.66
CD44-222ENST00000526025 ARG2P78540 354 aa19.19■□□□□ 0.66
CD44-222ENST00000526025 TUBA3CQ13748 450 aa19.19■□□□□ 0.66
CD44-222ENST00000526025 TUBA3EQ6PEY2 450 aa19.19■□□□□ 0.66
CD44-222ENST00000526025 Q6ZS92 163 aa19.19■□□□□ 0.66
CD44-222ENST00000526025 CLECL1Q8IZS7 167 aa19.19■□□□□ 0.66
CD44-222ENST00000526025 HORMAD2Q8N7B1 307 aa19.19■□□□□ 0.66
CD44-222ENST00000526025 RBMXL3Q8N7X1 1067 aaKnown RBP19.19■□□□□ 0.66
CD44-222ENST00000526025 NUP43Q8NFH3 380 aa19.19■□□□□ 0.66
CD44-222ENST00000526025 OR4A15Q8NGL6 344 aa19.19■□□□□ 0.66
CD44-222ENST00000526025 GIMAP5Q96F15 307 aa19.19■□□□□ 0.66
CD44-222ENST00000526025 ELAC2Q9BQ52 826 aaKnown RBP19.19■□□□□ 0.66
CD44-222ENST00000526025 LMF2Q9BU23 707 aaKnown RBP19.19■□□□□ 0.66
CD44-222ENST00000526025 CXorf36Q9H7Y0 433 aa19.19■□□□□ 0.66
CD44-222ENST00000526025 ANKRA2Q9H9E1 313 aa19.19■□□□□ 0.66
CD44-222ENST00000526025 ZNF71Q9NQZ8 489 aaPredicted RBP19.19■□□□□ 0.66
CD44-222ENST00000526025 PCDHGB6Q9Y5F9 930 aa19.19■□□□□ 0.66
CD44-222ENST00000526025 C9JVG2 144 aa19.18■□□□□ 0.66
CD44-222ENST00000526025 ERN1O75460 977 aaKnown RBP19.18■□□□□ 0.66
CD44-222ENST00000526025 CT45A8P0DMV1 189 aa19.18■□□□□ 0.66
CD44-222ENST00000526025 CT45A9P0DMV2 189 aa19.18■□□□□ 0.66
CD44-222ENST00000526025 NAGAP17050 411 aa19.18■□□□□ 0.66
CD44-222ENST00000526025 MAP3K8P41279 467 aa19.18■□□□□ 0.66
CD44-222ENST00000526025 CCT3P49368 545 aaKnown RBP19.18■□□□□ 0.66
CD44-222ENST00000526025 NRG3P56975 720 aa19.18■□□□□ 0.66
CD44-222ENST00000526025 TLR1Q15399 786 aa19.18■□□□□ 0.66
CD44-222ENST00000526025 VPS26BQ4G0F5 336 aa19.18■□□□□ 0.66
CD44-222ENST00000526025 AGKQ53H12 422 aa19.18■□□□□ 0.66
CD44-222ENST00000526025 CT45A2Q5DJT8 189 aa19.18■□□□□ 0.66
CD44-222ENST00000526025 EXOSC6Q5RKV6 272 aaKnown RBP19.18■□□□□ 0.66
CD44-222ENST00000526025 ANKRD46Q86W74 232 aa19.18■□□□□ 0.66
CD44-222ENST00000526025 TMEM156Q8N614 296 aa19.18■□□□□ 0.66
CD44-222ENST00000526025 TRIML2Q8N7C3 387 aa19.18■□□□□ 0.66
CD44-222ENST00000526025 CDRT4Q8N9R6 151 aa19.18■□□□□ 0.66
CD44-222ENST00000526025 ASB15Q8WXK1 588 aa19.18■□□□□ 0.66
CD44-222ENST00000526025 SPDL1Q96EA4 605 aa19.18■□□□□ 0.66
CD44-222ENST00000526025 ITCHQ96J02 903 aa19.18■□□□□ 0.66
CD44-222ENST00000526025 SGCZQ96LD1 299 aa19.18■□□□□ 0.66
CD44-222ENST00000526025 NXF5Q9H1B4 397 aaKnown RBP19.18■□□□□ 0.66
CD44-222ENST00000526025 SLC52A3Q9NQ40 469 aa19.18■□□□□ 0.66
CD44-222ENST00000526025 SAR1AQ9NR31 198 aa19.18■□□□□ 0.66
CD44-222ENST00000526025 ZCCHC3Q9NUD5 404 aaKnown RBP19.18■□□□□ 0.66
CD44-222ENST00000526025 GIN1Q9NXP7 522 aa19.18■□□□□ 0.66
CD44-222ENST00000526025 CCDC167Q9P0B6 97 aa19.18■□□□□ 0.66
CD44-222ENST00000526025 ADAM21Q9UKJ8 722 aa19.18■□□□□ 0.66
CD44-222ENST00000526025 TRAV17A0A0B4J275 112 aa19.17■□□□□ 0.66
CD44-222ENST00000526025 CCDC154A6NI56 674 aa19.17■□□□□ 0.66
CD44-222ENST00000526025 CAPN14A8MX76 684 aa19.17■□□□□ 0.66
CD44-222ENST00000526025 KRT16P08779 473 aa19.17■□□□□ 0.66
CD44-222ENST00000526025 FBXO45P0C2W1 286 aa19.17■□□□□ 0.66
Retrieved 100 of 20,778 RNA–protein pairs in 24.2 ms