RNA–Protein interactions for RNA: ENST00000525970.5

CSDE1-211, Transcript of cold shock domain containing E1, humanhuman

TSL 4

Gene CSDE1, Length 503 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSDE1-211ENST00000525970 LRRC70Q7Z2Q7 622 aa3.84□□□□□ -1.79
CSDE1-211ENST00000525970 HOGA1Q86XE5 327 aa3.84□□□□□ -1.79
CSDE1-211ENST00000525970 EFCAB13Q8IY85 973 aa3.84□□□□□ -1.79
CSDE1-211ENST00000525970 SPEM1Q8N4L4 309 aa3.84□□□□□ -1.79
CSDE1-211ENST00000525970 OR10V1Q8NGI7 309 aa3.84□□□□□ -1.79
CSDE1-211ENST00000525970 OR13C2Q8NGS9 318 aa3.84□□□□□ -1.79
CSDE1-211ENST00000525970 ATP8B4Q8TF62 1192 aa3.84□□□□□ -1.79
CSDE1-211ENST00000525970 RNF139Q8WU17 664 aa3.84□□□□□ -1.79
CSDE1-211ENST00000525970 TMEM190Q8WZ59 177 aa3.84□□□□□ -1.79
CSDE1-211ENST00000525970 TBCDQ9BTW9 1192 aa3.84□□□□□ -1.79
CSDE1-211ENST00000525970 ALG9Q9H6U8 611 aa3.84□□□□□ -1.79
CSDE1-211ENST00000525970 UBE2TQ9NPD8 197 aaPredicted RBP3.84□□□□□ -1.79
CSDE1-211ENST00000525970 FANCFQ9NPI8 374 aa3.84□□□□□ -1.79
CSDE1-211ENST00000525970 GDAP2Q9NXN4 497 aa3.84□□□□□ -1.79
CSDE1-211ENST00000525970 CTNNA3Q9UI47 895 aa3.84□□□□□ -1.79
CSDE1-211ENST00000525970 PURGQ9UJV8 347 aaKnown RBP3.84□□□□□ -1.79
CSDE1-211ENST00000525970 RNF6Q9Y252 685 aa3.84□□□□□ -1.79
CSDE1-211ENST00000525970 MRPS33Q9Y291 106 aaKnown RBP3.84□□□□□ -1.79
CSDE1-211ENST00000525970 G3V2L1 256 aa3.83□□□□□ -1.8
CSDE1-211ENST00000525970 H3BMH7 237 aa3.83□□□□□ -1.8
CSDE1-211ENST00000525970 BLOC1S5-TXNDC5H3BN57 136 aa3.83□□□□□ -1.8
CSDE1-211ENST00000525970 CLDN5O00501 218 aa3.83□□□□□ -1.8
CSDE1-211ENST00000525970 PCDH7O60245 1069 aa3.83□□□□□ -1.8
CSDE1-211ENST00000525970 JAK2O60674 1132 aa3.83□□□□□ -1.8
CSDE1-211ENST00000525970 BCAS1O75363 584 aaPredicted RBP3.83□□□□□ -1.8
CSDE1-211ENST00000525970 MTRF1O75570 445 aaKnown RBP3.83□□□□□ -1.8
CSDE1-211ENST00000525970 NXPH2O95156 264 aa3.83□□□□□ -1.8
CSDE1-211ENST00000525970 NXPH4O95158 308 aa3.83□□□□□ -1.8
CSDE1-211ENST00000525970 OAS1P00973 400 aaKnown RBP3.83□□□□□ -1.8
CSDE1-211ENST00000525970 CSF2P04141 144 aa3.83□□□□□ -1.8
CSDE1-211ENST00000525970 RPLP0P05388 317 aaKnown RBP3.83□□□□□ -1.8
CSDE1-211ENST00000525970 UGT2B4P06133 528 aa3.83□□□□□ -1.8
CSDE1-211ENST00000525970 TSPAN8P19075 237 aa3.83□□□□□ -1.8
CSDE1-211ENST00000525970 HNF1AP20823 631 aa3.83□□□□□ -1.8
CSDE1-211ENST00000525970 ANOS1P23352 680 aa3.83□□□□□ -1.8
CSDE1-211ENST00000525970 CHI3L1P36222 383 aaPredicted RBP3.83□□□□□ -1.8
CSDE1-211ENST00000525970 CRYBA2P53672 197 aa3.83□□□□□ -1.8
CSDE1-211ENST00000525970 CBX1P83916 185 aa3.83□□□□□ -1.8
CSDE1-211ENST00000525970 RBBP4Q09028 425 aa3.83□□□□□ -1.8
CSDE1-211ENST00000525970 TATDN3Q17R31 274 aa3.83□□□□□ -1.8
CSDE1-211ENST00000525970 DDI2Q5TDH0 399 aa3.83□□□□□ -1.8
CSDE1-211ENST00000525970 FIP1L1Q6UN15 594 aaKnown RBP3.83□□□□□ -1.8
CSDE1-211ENST00000525970 ATRAIDQ6UW56 229 aa3.83□□□□□ -1.8
CSDE1-211ENST00000525970 Q6ZRP5 223 aa3.83□□□□□ -1.8
CSDE1-211ENST00000525970 PYROXD2Q8N2H3 581 aa3.83□□□□□ -1.8
CSDE1-211ENST00000525970 OR6S1Q8NH40 331 aa3.83□□□□□ -1.8
CSDE1-211ENST00000525970 RAET1EQ8TD07 263 aa3.83□□□□□ -1.8
CSDE1-211ENST00000525970 SPRYD4Q8WW59 207 aaPredicted RBP3.83□□□□□ -1.8
CSDE1-211ENST00000525970 EMG1Q92979 244 aaKnown RBP3.83□□□□□ -1.8
CSDE1-211ENST00000525970 DLX4Q92988 240 aaPredicted RBP3.83□□□□□ -1.8
CSDE1-211ENST00000525970 TUBGCP3Q96CW5 907 aa3.83□□□□□ -1.8
CSDE1-211ENST00000525970 HPDLQ96IR7 371 aa3.83□□□□□ -1.8
CSDE1-211ENST00000525970 ZBTB18Q99592 522 aa3.83□□□□□ -1.8
CSDE1-211ENST00000525970 CCT7Q99832 543 aa3.83□□□□□ -1.8
CSDE1-211ENST00000525970 VCX2Q9H322 139 aa3.83□□□□□ -1.8
CSDE1-211ENST00000525970 Q9HAA7 133 aa3.83□□□□□ -1.8
CSDE1-211ENST00000525970 NRN1Q9NPD7 142 aa3.83□□□□□ -1.8
CSDE1-211ENST00000525970 RAI14Q9P0K7 980 aa3.83□□□□□ -1.8
CSDE1-211ENST00000525970 TMEM181Q9P2C4 612 aa3.83□□□□□ -1.8
CSDE1-211ENST00000525970 ZNF346Q9UL40 294 aaKnown RBP3.83□□□□□ -1.8
CSDE1-211ENST00000525970 NIP7Q9Y221 180 aaKnown RBP eCLIP3.83□□□□□ -1.8
CSDE1-211ENST00000525970 AP4B1Q9Y6B7 739 aa3.83□□□□□ -1.8
CSDE1-211ENST00000525970 ZHX2Q9Y6X8 837 aa3.83□□□□□ -1.8
CSDE1-211ENST00000525970 CCDC7Q96M83 1385 aa3.83□□□□□ -1.8
CSDE1-211ENST00000525970 ATP10DQ9P241 1426 aa3.83□□□□□ -1.8
CSDE1-211ENST00000525970 LOC105371242A0A075B767 164 aa3.82□□□□□ -1.8
CSDE1-211ENST00000525970 TTC26A0AVF1 554 aa3.82□□□□□ -1.8
CSDE1-211ENST00000525970 XKRY2A2RUG3 117 aa3.82□□□□□ -1.8
CSDE1-211ENST00000525970 PMS2P5A8MQ11 134 aa3.82□□□□□ -1.8
CSDE1-211ENST00000525970 FAM72CH0Y354 149 aa3.82□□□□□ -1.8
CSDE1-211ENST00000525970 K7EQD1 137 aa3.82□□□□□ -1.8
CSDE1-211ENST00000525970 ZSCAN12O43309 604 aa3.82□□□□□ -1.8
CSDE1-211ENST00000525970 OR1F1O43749 312 aa3.82□□□□□ -1.8
CSDE1-211ENST00000525970 TM7SF2O76062 418 aa3.82□□□□□ -1.8
CSDE1-211ENST00000525970 ECDO95905 644 aaPredicted RBP3.82□□□□□ -1.8
CSDE1-211ENST00000525970 IGHEP01854 428 aa3.82□□□□□ -1.8
CSDE1-211ENST00000525970 SFTPCP11686 197 aa3.82□□□□□ -1.8
CSDE1-211ENST00000525970 GNB3P16520 340 aa3.82□□□□□ -1.8
CSDE1-211ENST00000525970 RFC2P35250 354 aa3.82□□□□□ -1.8
CSDE1-211ENST00000525970 HTR5AP47898 357 aa3.82□□□□□ -1.8
CSDE1-211ENST00000525970 ABCE1P61221 599 aaKnown RBP3.82□□□□□ -1.8
CSDE1-211ENST00000525970 TNFRSF17Q02223 184 aa3.82□□□□□ -1.8
CSDE1-211ENST00000525970 SRYQ05066 204 aa3.82□□□□□ -1.8
CSDE1-211ENST00000525970 TPD52L1Q16890 204 aaPredicted RBP3.82□□□□□ -1.8
CSDE1-211ENST00000525970 FFAR4Q5NUL3 377 aa3.82□□□□□ -1.8
CSDE1-211ENST00000525970 FAM72AQ5TYM5 149 aa3.82□□□□□ -1.8
CSDE1-211ENST00000525970 TTC23Q5W5X9 447 aa3.82□□□□□ -1.8
CSDE1-211ENST00000525970 WDR25Q64LD2 544 aaPredicted RBP3.82□□□□□ -1.8
CSDE1-211ENST00000525970 FAM72DQ6L9T8 149 aa3.82□□□□□ -1.8
CSDE1-211ENST00000525970 C3P1Q6ZMU1 363 aa3.82□□□□□ -1.8
CSDE1-211ENST00000525970 P4HA3Q7Z4N8 544 aa3.82□□□□□ -1.8
CSDE1-211ENST00000525970 PARGQ86W56 976 aa3.82□□□□□ -1.8
CSDE1-211ENST00000525970 FAM72BQ86X60 149 aa3.82□□□□□ -1.8
CSDE1-211ENST00000525970 NANPQ8TBE9 248 aa3.82□□□□□ -1.8
CSDE1-211ENST00000525970 FBXO25Q8TCJ0 367 aa3.82□□□□□ -1.8
CSDE1-211ENST00000525970 FBXO17Q96EF6 278 aa3.82□□□□□ -1.8
CSDE1-211ENST00000525970 PGLYRP2Q96PD5 576 aa3.82□□□□□ -1.8
CSDE1-211ENST00000525970 ALKBH3Q96Q83 286 aaPredicted RBP3.82□□□□□ -1.8
CSDE1-211ENST00000525970 GPN2Q9H9Y4 310 aaPredicted RBP3.82□□□□□ -1.8
CSDE1-211ENST00000525970 NMUR1Q9HB89 426 aa3.82□□□□□ -1.8
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms