RNA–Protein interactions for RNA: ENST00000525685.5

CD44-219, Transcript of CD44 molecule (Indian blood group), humanhuman

TSL 3

Gene CD44, Length 728 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-219ENST00000525685 MOB4Q9Y3A3 225 aa3.29□□□□□ -1.88
CD44-219ENST00000525685 HES2Q9Y543 173 aa3.29□□□□□ -1.88
CD44-219ENST00000525685 TDRD15B5MCY1 1934 aaKnown RBP3.29□□□□□ -1.88
CD44-219ENST00000525685 PDE4DIPQ5VU43 2346 aa3.28□□□□□ -1.88
CD44-219ENST00000525685 TSC2P49815 1807 aa3.28□□□□□ -1.88
CD44-219ENST00000525685 UBE4BO95155 1302 aa3.28□□□□□ -1.88
CD44-219ENST00000525685 A0A087WZ39 114 aa3.28□□□□□ -1.88
CD44-219ENST00000525685 hCG_38984A0A1B0GV85 526 aa3.28□□□□□ -1.88
CD44-219ENST00000525685 PVALEFA0A1B0GWK0 134 aa3.28□□□□□ -1.88
CD44-219ENST00000525685 ILVBLA1L0T0 632 aa3.28□□□□□ -1.88
CD44-219ENST00000525685 ARL5CA6NH57 179 aa3.28□□□□□ -1.88
CD44-219ENST00000525685 TFECO14948 347 aaPredicted RBP3.28□□□□□ -1.88
CD44-219ENST00000525685 FAM189A1O60320 539 aa3.28□□□□□ -1.88
CD44-219ENST00000525685 SAP30O75446 220 aa3.28□□□□□ -1.88
CD44-219ENST00000525685 TOM1L1O75674 476 aa3.28□□□□□ -1.88
CD44-219ENST00000525685 SORBS2O94875 1100 aaKnown RBP3.28□□□□□ -1.88
CD44-219ENST00000525685 TGDSO95455 350 aa3.28□□□□□ -1.88
CD44-219ENST00000525685 MT-ND2P03891 347 aa3.28□□□□□ -1.88
CD44-219ENST00000525685 RPLP0P05388 317 aaKnown RBP3.28□□□□□ -1.88
CD44-219ENST00000525685 FAM200BP0CF97 657 aa3.28□□□□□ -1.88
CD44-219ENST00000525685 CXCL8P10145 99 aa3.28□□□□□ -1.88
CD44-219ENST00000525685 DLATP10515 647 aaKnown RBP3.28□□□□□ -1.88
CD44-219ENST00000525685 MCF2P10911 925 aa3.28□□□□□ -1.88
CD44-219ENST00000525685 FOSL2P15408 326 aa3.28□□□□□ -1.88
CD44-219ENST00000525685 AOC1P19801 751 aa3.28□□□□□ -1.88
CD44-219ENST00000525685 ITIH1P19827 911 aa3.28□□□□□ -1.88
CD44-219ENST00000525685 TNFSF9P41273 254 aa3.28□□□□□ -1.88
CD44-219ENST00000525685 SLC11A1P49279 550 aa3.28□□□□□ -1.88
CD44-219ENST00000525685 TMEM50BP56557 158 aa3.28□□□□□ -1.88
CD44-219ENST00000525685 OSTNP61366 133 aa3.28□□□□□ -1.88
CD44-219ENST00000525685 NCBP1Q09161 790 aaKnown RBP3.28□□□□□ -1.88
CD44-219ENST00000525685 GPM6BQ13491 265 aa3.28□□□□□ -1.88
CD44-219ENST00000525685 PNOCQ13519 176 aa3.28□□□□□ -1.88
CD44-219ENST00000525685 MTF1Q14872 753 aa3.28□□□□□ -1.88
CD44-219ENST00000525685 LRRC37A5PQ49AS3 106 aa3.28□□□□□ -1.88
CD44-219ENST00000525685 FAM106AQ4KMX7 169 aa3.28□□□□□ -1.88
CD44-219ENST00000525685 ANKRD20A4Q4UJ75 823 aa3.28□□□□□ -1.88
CD44-219ENST00000525685 EPC2Q52LR7 807 aa3.28□□□□□ -1.88
CD44-219ENST00000525685 ANKRD20A8PQ5CZ79 823 aa3.28□□□□□ -1.88
CD44-219ENST00000525685 ZRANB3Q5FWF4 1079 aa3.28□□□□□ -1.88
CD44-219ENST00000525685 HERC4Q5GLZ8 1057 aaPredicted RBP3.28□□□□□ -1.88
CD44-219ENST00000525685 GLRA4Q5JXX5 417 aa3.28□□□□□ -1.88
CD44-219ENST00000525685 ANKRD20A2Q5SQ80 823 aa3.28□□□□□ -1.88
CD44-219ENST00000525685 ANKRD20A1Q5TYW2 823 aa3.28□□□□□ -1.88
CD44-219ENST00000525685 ANKRD20A3Q5VUR7 823 aa3.28□□□□□ -1.88
CD44-219ENST00000525685 FAAP20Q6NZ36 180 aa3.28□□□□□ -1.88
CD44-219ENST00000525685 LCLAT1Q6UWP7 414 aa3.28□□□□□ -1.88
CD44-219ENST00000525685 GBP6Q6ZN66 633 aa3.28□□□□□ -1.88
CD44-219ENST00000525685 ZNF497Q6ZNH5 498 aa3.28□□□□□ -1.88
CD44-219ENST00000525685 Q6ZRP5 223 aa3.28□□□□□ -1.88
CD44-219ENST00000525685 OTOAQ7RTW8 1153 aa3.28□□□□□ -1.88
CD44-219ENST00000525685 ZNF720Q7Z2F6 126 aa3.28□□□□□ -1.88
CD44-219ENST00000525685 TRMT11Q7Z4G4 463 aaKnown RBP3.28□□□□□ -1.88
CD44-219ENST00000525685 KRTAP7-1Q8IUC3 87 aa3.28□□□□□ -1.88
CD44-219ENST00000525685 CLYBLQ8N0X4 340 aa3.28□□□□□ -1.88
CD44-219ENST00000525685 SLC39A11Q8N1S5 342 aa3.28□□□□□ -1.88
CD44-219ENST00000525685 COLGALT1Q8NBJ5 622 aa3.28□□□□□ -1.88
CD44-219ENST00000525685 OR52B6Q8NGF0 335 aa3.28□□□□□ -1.88
CD44-219ENST00000525685 URGCPQ8TCY9 931 aa3.28□□□□□ -1.88
CD44-219ENST00000525685 SCFD1Q8WVM8 642 aa3.28□□□□□ -1.88
CD44-219ENST00000525685 CKAP2Q8WWK9 683 aa3.28□□□□□ -1.88
CD44-219ENST00000525685 RSPH1Q8WYR4 309 aa3.28□□□□□ -1.88
CD44-219ENST00000525685 VMP1Q96GC9 406 aa3.28□□□□□ -1.88
CD44-219ENST00000525685 C18orf12Q96KH6 178 aa3.28□□□□□ -1.88
CD44-219ENST00000525685 AGAP4Q96P64 663 aa3.28□□□□□ -1.88
CD44-219ENST00000525685 MLPHQ9BV36 600 aaPredicted RBP3.28□□□□□ -1.88
CD44-219ENST00000525685 EGLN1Q9GZT9 426 aa3.28□□□□□ -1.88
CD44-219ENST00000525685 WWTR1Q9GZV5 400 aa3.28□□□□□ -1.88
CD44-219ENST00000525685 MMADHCQ9H3L0 296 aaPredicted RBP3.28□□□□□ -1.88
CD44-219ENST00000525685 GPN1Q9HCN4 374 aaPredicted RBP3.28□□□□□ -1.88
CD44-219ENST00000525685 ABCB8Q9NUT2 735 aa3.28□□□□□ -1.88
CD44-219ENST00000525685 MARCH5Q9NX47 278 aa3.28□□□□□ -1.88
CD44-219ENST00000525685 SATB2Q9UPW6 733 aa3.28□□□□□ -1.88
CD44-219ENST00000525685 KLK4Q9Y5K2 254 aa3.28□□□□□ -1.88
CD44-219ENST00000525685 ANK1P16157 1881 aa3.28□□□□□ -1.88
CD44-219ENST00000525685 DNAH12Q6ZR08 3092 aa3.28□□□□□ -1.89
CD44-219ENST00000525685 A0A0U1RQK1 487 aa3.27□□□□□ -1.89
CD44-219ENST00000525685 ZNF320A2RRD8 509 aa3.27□□□□□ -1.89
CD44-219ENST00000525685 GOLGA6L4A6NEF3 574 aa3.27□□□□□ -1.89
CD44-219ENST00000525685 ANTXRLA6NF34 631 aa3.27□□□□□ -1.89
CD44-219ENST00000525685 ANKRD63C9JTQ0 380 aa3.27□□□□□ -1.89
CD44-219ENST00000525685 SLC33A1O00400 549 aaPredicted RBP3.27□□□□□ -1.89
CD44-219ENST00000525685 SLC30A4O14863 429 aa3.27□□□□□ -1.89
CD44-219ENST00000525685 OGTO15294 1046 aa3.27□□□□□ -1.89
CD44-219ENST00000525685 CLDN3O15551 220 aa3.27□□□□□ -1.89
CD44-219ENST00000525685 DCXO43602 365 aa3.27□□□□□ -1.89
CD44-219ENST00000525685 SCO2O43819 266 aa3.27□□□□□ -1.89
CD44-219ENST00000525685 KINO60870 393 aaKnown RBP3.27□□□□□ -1.89
CD44-219ENST00000525685 ZSCAN5DPP0CG00 497 aa3.27□□□□□ -1.89
CD44-219ENST00000525685 C8orf89P0DMQ9 161 aa3.27□□□□□ -1.89
CD44-219ENST00000525685 CPA3P15088 417 aa3.27□□□□□ -1.89
CD44-219ENST00000525685 KCNE1P15382 129 aa3.27□□□□□ -1.89
CD44-219ENST00000525685 DNAJB1P25685 340 aa3.27□□□□□ -1.89
CD44-219ENST00000525685 ATP5DP30049 168 aa3.27□□□□□ -1.89
CD44-219ENST00000525685 ADSSP30520 456 aa3.27□□□□□ -1.89
CD44-219ENST00000525685 TIA1P31483 386 aaKnown RBP eCLIP3.27□□□□□ -1.89
CD44-219ENST00000525685 HNF4AP41235 474 aa3.27□□□□□ -1.89
CD44-219ENST00000525685 ST8SIA6P61647 398 aa3.27□□□□□ -1.89
CD44-219ENST00000525685 UBE2HP62256 183 aa3.27□□□□□ -1.89
CD44-219ENST00000525685 MS4A2Q01362 244 aa3.27□□□□□ -1.89
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms