RNA–Protein interactions for RNA: ENST00000525209.5

CD44-213, Transcript of CD44 molecule (Indian blood group), humanhuman

TSL 4

Gene CD44, Length 574 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-213ENST00000525209 AKR1E2Q96JD6 320 aa4.13□□□□□ -1.75
CD44-213ENST00000525209 SERAC1Q96JX3 654 aa4.13□□□□□ -1.75
CD44-213ENST00000525209 GLT1D1Q96MS3 346 aa4.13□□□□□ -1.75
CD44-213ENST00000525209 NDUFAF3Q9BU61 184 aa4.13□□□□□ -1.75
CD44-213ENST00000525209 GATA5Q9BWX5 397 aaPredicted RBP4.13□□□□□ -1.75
CD44-213ENST00000525209 PARD6GQ9BYG4 376 aaPredicted RBP4.13□□□□□ -1.75
CD44-213ENST00000525209 PARD6BQ9BYG5 372 aa4.13□□□□□ -1.75
CD44-213ENST00000525209 CENPHQ9H3R5 247 aa4.13□□□□□ -1.75
CD44-213ENST00000525209 DHX33Q9H6R0 707 aaKnown RBP4.13□□□□□ -1.75
CD44-213ENST00000525209 PPP1R3EQ9H7J1 279 aa4.13□□□□□ -1.75
CD44-213ENST00000525209 IL1RL2Q9HB29 575 aa4.13□□□□□ -1.75
CD44-213ENST00000525209 DYRK4Q9NR20 520 aa4.13□□□□□ -1.75
CD44-213ENST00000525209 SLC2A4RGQ9NR83 387 aa4.13□□□□□ -1.75
CD44-213ENST00000525209 TREX1Q9NSU2 369 aa4.13□□□□□ -1.75
CD44-213ENST00000525209 ZFP57Q9NU63 452 aa4.13□□□□□ -1.75
CD44-213ENST00000525209 RNF181Q9P0P0 153 aa4.13□□□□□ -1.75
CD44-213ENST00000525209 KLHL13Q9P2N7 655 aa4.13□□□□□ -1.75
CD44-213ENST00000525209 PHF11Q9UIL8 331 aa4.13□□□□□ -1.75
CD44-213ENST00000525209 SIX4Q9UIU6 781 aa4.13□□□□□ -1.75
CD44-213ENST00000525209 KCNE5Q9UJ90 142 aa4.13□□□□□ -1.75
CD44-213ENST00000525209 EMCNQ9ULC0 261 aa4.13□□□□□ -1.75
CD44-213ENST00000525209 SCML1Q9UN30 329 aa4.13□□□□□ -1.75
CD44-213ENST00000525209 FLVCR2Q9UPI3 526 aa4.13□□□□□ -1.75
CD44-213ENST00000525209 EXOGQ9Y2C4 368 aaKnown RBP4.13□□□□□ -1.75
CD44-213ENST00000525209 GSTK1Q9Y2Q3 226 aa4.13□□□□□ -1.75
CD44-213ENST00000525209 PCDHGB1Q9Y5G3 927 aa4.13□□□□□ -1.75
CD44-213ENST00000525209 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP4.13□□□□□ -1.75
CD44-213ENST00000525209 KDM5CP41229 1560 aa4.13□□□□□ -1.75
CD44-213ENST00000525209 SAMD9LQ8IVG5 1584 aa4.13□□□□□ -1.75
CD44-213ENST00000525209 AFF2P51816 1311 aa4.13□□□□□ -1.75
CD44-213ENST00000525209 CGNL1Q0VF96 1302 aa4.13□□□□□ -1.75
CD44-213ENST00000525209 PNPLA6Q8IY17 1366 aa4.13□□□□□ -1.75
CD44-213ENST00000525209 LRRIQ1Q96JM4 1722 aa4.12□□□□□ -1.75
CD44-213ENST00000525209 LRRC7Q96NW7 1537 aa4.12□□□□□ -1.75
CD44-213ENST00000525209 TRAV18A0A075B6X5 111 aa4.12□□□□□ -1.75
CD44-213ENST00000525209 KRTAP4-8A0A0G2JLE6 195 aa4.12□□□□□ -1.75
CD44-213ENST00000525209 A0A1B0GUA9 196 aa4.12□□□□□ -1.75
CD44-213ENST00000525209 PRSS51A0A1B0GVH4 220 aa4.12□□□□□ -1.75
CD44-213ENST00000525209 A0A1W2PPE3 182 aa4.12□□□□□ -1.75
CD44-213ENST00000525209 CXorf65A6NEN9 183 aa4.12□□□□□ -1.75
CD44-213ENST00000525209 DBX1A6NMT0 343 aa4.12□□□□□ -1.75
CD44-213ENST00000525209 CENPBD1B2RD01 187 aa4.12□□□□□ -1.75
CD44-213ENST00000525209 SLCO1B7G3V0H7 640 aa4.12□□□□□ -1.75
CD44-213ENST00000525209 H3BQV1 296 aa4.12□□□□□ -1.75
CD44-213ENST00000525209 ARPC1BO15143 372 aaKnown RBP4.12□□□□□ -1.75
CD44-213ENST00000525209 HSPA12AO43301 675 aa4.12□□□□□ -1.75
CD44-213ENST00000525209 MSI1O43347 362 aaKnown RBP4.12□□□□□ -1.75
CD44-213ENST00000525209 LATO43561 262 aa4.12□□□□□ -1.75
CD44-213ENST00000525209 SYT7O43581 403 aa4.12□□□□□ -1.75
CD44-213ENST00000525209 RGS11O94810 467 aa4.12□□□□□ -1.75
CD44-213ENST00000525209 SEMA3DO95025 777 aa4.12□□□□□ -1.75
CD44-213ENST00000525209 RPP14O95059 124 aaKnown RBP4.12□□□□□ -1.75
CD44-213ENST00000525209 ANP32DO95626 131 aa4.12□□□□□ -1.75
CD44-213ENST00000525209 TFPIP10646 304 aa4.12□□□□□ -1.75
CD44-213ENST00000525209 PPP3CBP16298 524 aa4.12□□□□□ -1.75
CD44-213ENST00000525209 ZNF23P17027 643 aa4.12□□□□□ -1.75
CD44-213ENST00000525209 GOT1P17174 413 aa4.12□□□□□ -1.75
CD44-213ENST00000525209 EIF2S2P20042 333 aaKnown RBP4.12□□□□□ -1.75
CD44-213ENST00000525209 CNR1P21554 472 aa4.12□□□□□ -1.75
CD44-213ENST00000525209 MMP11P24347 488 aa4.12□□□□□ -1.75
CD44-213ENST00000525209 STOMP27105 288 aa4.12□□□□□ -1.75
CD44-213ENST00000525209 PDHA2P29803 388 aa4.12□□□□□ -1.75
CD44-213ENST00000525209 MMP12P39900 470 aa4.12□□□□□ -1.75
CD44-213ENST00000525209 CRYBB2P43320 205 aa4.12□□□□□ -1.75
CD44-213ENST00000525209 GLIPR1P48060 266 aa4.12□□□□□ -1.75
CD44-213ENST00000525209 COPB1P53618 953 aaKnown RBP4.12□□□□□ -1.75
CD44-213ENST00000525209 LIMK2P53671 638 aa4.12□□□□□ -1.75
CD44-213ENST00000525209 ATP5J2P56134 94 aa4.12□□□□□ -1.75
CD44-213ENST00000525209 CLDN18P56856 261 aa4.12□□□□□ -1.75
CD44-213ENST00000525209 MAD2L1Q13257 205 aaPredicted RBP4.12□□□□□ -1.75
CD44-213ENST00000525209 GK3PQ14409 553 aa4.12□□□□□ -1.75
CD44-213ENST00000525209 MESDQ14696 234 aa4.12□□□□□ -1.75
CD44-213ENST00000525209 FASTKD3Q14CZ7 662 aaKnown RBP4.12□□□□□ -1.75
CD44-213ENST00000525209 CA9Q16790 459 aa4.12□□□□□ -1.75
CD44-213ENST00000525209 RNF151Q2KHN1 245 aa4.12□□□□□ -1.75
CD44-213ENST00000525209 TEDDM1Q5T9Z0 273 aa4.12□□□□□ -1.75
CD44-213ENST00000525209 NT5DC1Q5TFE4 455 aa4.12□□□□□ -1.75
CD44-213ENST00000525209 SP5Q6BEB4 398 aaPredicted RBP4.12□□□□□ -1.75
CD44-213ENST00000525209 FAM71F2Q6NXP2 309 aa4.12□□□□□ -1.75
CD44-213ENST00000525209 KIRREL2Q6UWL6 708 aa4.12□□□□□ -1.75
CD44-213ENST00000525209 ASCL4Q6XD76 172 aa4.12□□□□□ -1.75
CD44-213ENST00000525209 Q6ZWC4 215 aa4.12□□□□□ -1.75
CD44-213ENST00000525209 H2BFWTQ7Z2G1 175 aa4.12□□□□□ -1.75
CD44-213ENST00000525209 MRPL21Q7Z2W9 205 aaKnown RBP4.12□□□□□ -1.75
CD44-213ENST00000525209 DPY19L4Q7Z388 723 aa4.12□□□□□ -1.75
CD44-213ENST00000525209 SERPINA11Q86U17 422 aa4.12□□□□□ -1.75
CD44-213ENST00000525209 SLC26A11Q86WA9 606 aa4.12□□□□□ -1.75
CD44-213ENST00000525209 SFTPA1Q8IWL2 248 aa4.12□□□□□ -1.75
CD44-213ENST00000525209 GCSAMQ8N6F7 178 aa4.12□□□□□ -1.75
CD44-213ENST00000525209 LINC01465Q8N7H1 131 aa4.12□□□□□ -1.75
CD44-213ENST00000525209 THAP8Q8NA92 274 aa4.12□□□□□ -1.75
CD44-213ENST00000525209 CYB561A3Q8NBI2 242 aa4.12□□□□□ -1.75
CD44-213ENST00000525209 CPEB3Q8NE35 698 aaKnown RBP4.12□□□□□ -1.75
CD44-213ENST00000525209 DDHD1Q8NEL9 900 aa4.12□□□□□ -1.75
CD44-213ENST00000525209 ABHD11Q8NFV4 315 aa4.12□□□□□ -1.75
CD44-213ENST00000525209 OR52I2Q8NH67 350 aa4.12□□□□□ -1.75
CD44-213ENST00000525209 PPP4R1Q8TF05 950 aa4.12□□□□□ -1.75
CD44-213ENST00000525209 FAM3CQ92520 227 aa4.12□□□□□ -1.75
CD44-213ENST00000525209 ECHDC3Q96DC8 303 aa4.12□□□□□ -1.75
CD44-213ENST00000525209 LGALS12Q96DT0 336 aa4.12□□□□□ -1.75
Retrieved 100 of 20,778 RNA–protein pairs in 42.5 ms