RNA–Protein interactions for RNA: ENST00000524927.1

NEDD8-203, Transcript of neural precursor cell expressed, developmentally down-regulated 8, humanhuman

TSL 2 BASIC

Gene NEDD8, Length 653 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD8-203ENST00000524927 EURLQ9NYK6 297 aa6.25□□□□□ -1.41
NEDD8-203ENST00000524927 KLHL21Q9UJP4 597 aa6.25□□□□□ -1.41
NEDD8-203ENST00000524927 PSMD13Q9UNM6 376 aa6.25□□□□□ -1.41
NEDD8-203ENST00000524927 LAMP3Q9UQV4 416 aa6.25□□□□□ -1.41
NEDD8-203ENST00000524927 PGPEP1LA6NFU8 196 aa6.24□□□□□ -1.41
NEDD8-203ENST00000524927 LINC01548A6NM66 108 aa6.24□□□□□ -1.41
NEDD8-203ENST00000524927 J3KR12 359 aa6.24□□□□□ -1.41
NEDD8-203ENST00000524927 STX10O60499 249 aa6.24□□□□□ -1.41
NEDD8-203ENST00000524927 CDK14O94921 469 aa6.24□□□□□ -1.41
NEDD8-203ENST00000524927 PGLSO95336 258 aa6.24□□□□□ -1.41
NEDD8-203ENST00000524927 EPPINO95925 133 aa6.24□□□□□ -1.41
NEDD8-203ENST00000524927 HEXBP07686 556 aa6.24□□□□□ -1.41
NEDD8-203ENST00000524927 CTPS1P17812 591 aa6.24□□□□□ -1.41
NEDD8-203ENST00000524927 PCYT1AP49585 367 aa6.24□□□□□ -1.41
NEDD8-203ENST00000524927 NAP1L1P55209 391 aaKnown RBP6.24□□□□□ -1.41
NEDD8-203ENST00000524927 ADARP55265 1226 aaKnown RBP6.24□□□□□ -1.41
NEDD8-203ENST00000524927 PPIAP62937 165 aaKnown RBP6.24□□□□□ -1.41
NEDD8-203ENST00000524927 HMGN5P82970 282 aaKnown RBP6.24□□□□□ -1.41
NEDD8-203ENST00000524927 ITPRIPL1Q6GPH6 555 aa6.24□□□□□ -1.41
NEDD8-203ENST00000524927 PRMT9Q6P2P2 845 aa6.24□□□□□ -1.41
NEDD8-203ENST00000524927 FAM183BPQ6ZVS7 135 aa6.24□□□□□ -1.41
NEDD8-203ENST00000524927 BNIPLQ7Z465 357 aa6.24□□□□□ -1.41
NEDD8-203ENST00000524927 AMZ2Q86W34 360 aa6.24□□□□□ -1.41
NEDD8-203ENST00000524927 CCDC25Q86WR0 208 aa6.24□□□□□ -1.41
NEDD8-203ENST00000524927 FAM131BQ86XD5 332 aa6.24□□□□□ -1.41
NEDD8-203ENST00000524927 LACC1Q8IV20 430 aa6.24□□□□□ -1.41
NEDD8-203ENST00000524927 M1APQ8TC57 530 aa6.24□□□□□ -1.41
NEDD8-203ENST00000524927 METTL6Q8TCB7 284 aa6.24□□□□□ -1.41
NEDD8-203ENST00000524927 ZNF418Q8TF45 676 aaPredicted RBP6.24□□□□□ -1.41
NEDD8-203ENST00000524927 PIH1D2Q8WWB5 315 aa6.24□□□□□ -1.41
NEDD8-203ENST00000524927 CPXM1Q96SM3 734 aa6.24□□□□□ -1.41
NEDD8-203ENST00000524927 PCDHB16Q9NRJ7 776 aa6.24□□□□□ -1.41
NEDD8-203ENST00000524927 NLKQ9UBE8 527 aa6.24□□□□□ -1.41
NEDD8-203ENST00000524927 IKZF3Q9UKT9 509 aa6.24□□□□□ -1.41
NEDD8-203ENST00000524927 ACSL5Q9ULC5 683 aa6.24□□□□□ -1.41
NEDD8-203ENST00000524927 COQ4Q9Y3A0 265 aa6.24□□□□□ -1.41
NEDD8-203ENST00000524927 MAU2Q9Y6X3 613 aa6.24□□□□□ -1.41
NEDD8-203ENST00000524927 C2CD4BA6NLJ0 364 aa6.23□□□□□ -1.41
NEDD8-203ENST00000524927 FAM72CH0Y354 149 aa6.23□□□□□ -1.41
NEDD8-203ENST00000524927 HS3ST1O14792 307 aa6.23□□□□□ -1.41
NEDD8-203ENST00000524927 MED7O43513 233 aa6.23□□□□□ -1.41
NEDD8-203ENST00000524927 UGDHO60701 494 aa6.23□□□□□ -1.41
NEDD8-203ENST00000524927 ADAP00813 363 aa6.23□□□□□ -1.41
NEDD8-203ENST00000524927 CALCAP01258 141 aa6.23□□□□□ -1.41
NEDD8-203ENST00000524927 ARL1P40616 181 aaPredicted RBP6.23□□□□□ -1.41
NEDD8-203ENST00000524927 SPINT3P49223 89 aa6.23□□□□□ -1.41
NEDD8-203ENST00000524927 HLCSP50747 726 aa6.23□□□□□ -1.41
NEDD8-203ENST00000524927 SNX16P57768 344 aa6.23□□□□□ -1.41
NEDD8-203ENST00000524927 HILS1P60008 231 aa6.23□□□□□ -1.41
NEDD8-203ENST00000524927 TRAF2Q12933 501 aa6.23□□□□□ -1.41
NEDD8-203ENST00000524927 SCGB2A2Q13296 93 aa6.23□□□□□ -1.41
NEDD8-203ENST00000524927 DCTN2Q13561 401 aaKnown RBP6.23□□□□□ -1.41
NEDD8-203ENST00000524927 TBCEQ15813 527 aaPredicted RBP6.23□□□□□ -1.41
NEDD8-203ENST00000524927 EXT1Q16394 746 aa6.23□□□□□ -1.41
NEDD8-203ENST00000524927 SLC9B1Q4ZJI4 515 aa6.23□□□□□ -1.41
NEDD8-203ENST00000524927 TCTE1Q5JU00 501 aa6.23□□□□□ -1.41
NEDD8-203ENST00000524927 ARMC12Q5T9G4 340 aa6.23□□□□□ -1.41
NEDD8-203ENST00000524927 FAM72AQ5TYM5 149 aa6.23□□□□□ -1.41
NEDD8-203ENST00000524927 PDPK2PQ6A1A2 396 aa6.23□□□□□ -1.41
NEDD8-203ENST00000524927 FAM72DQ6L9T8 149 aa6.23□□□□□ -1.41
NEDD8-203ENST00000524927 IL20RBQ6UXL0 311 aa6.23□□□□□ -1.41
NEDD8-203ENST00000524927 ZNF782Q6ZMW2 699 aaPredicted RBP6.23□□□□□ -1.41
NEDD8-203ENST00000524927 DEF8Q6ZN54 512 aa6.23□□□□□ -1.41
NEDD8-203ENST00000524927 ZNF704Q6ZNC4 412 aaPredicted RBP6.23□□□□□ -1.41
NEDD8-203ENST00000524927 ZNF788Q6ZQV5 615 aa6.23□□□□□ -1.41
NEDD8-203ENST00000524927 SH2D5Q6ZV89 423 aa6.23□□□□□ -1.41
NEDD8-203ENST00000524927 USP43Q70EL4 1123 aa6.23□□□□□ -1.41
NEDD8-203ENST00000524927 IGFN1Q86VF2 1251 aa6.23□□□□□ -1.41
NEDD8-203ENST00000524927 SLC22A16Q86VW1 577 aa6.23□□□□□ -1.41
NEDD8-203ENST00000524927 FAM72BQ86X60 149 aa6.23□□□□□ -1.41
NEDD8-203ENST00000524927 ZDHHC17Q8IUH5 632 aa6.23□□□□□ -1.41
NEDD8-203ENST00000524927 TRAPPC5Q8IUR0 188 aa6.23□□□□□ -1.41
NEDD8-203ENST00000524927 METTL27Q8N6F8 245 aaPredicted RBP6.23□□□□□ -1.41
NEDD8-203ENST00000524927 PLD5Q8N7P1 536 aa6.23□□□□□ -1.41
NEDD8-203ENST00000524927 FAM184AQ8NB25 1140 aa6.23□□□□□ -1.41
NEDD8-203ENST00000524927 BCAS4Q8TDM0 211 aa6.23□□□□□ -1.41
NEDD8-203ENST00000524927 GLYATL1Q969I3 302 aa6.23□□□□□ -1.41
NEDD8-203ENST00000524927 C12orf66Q96MD2 445 aa6.23□□□□□ -1.41
NEDD8-203ENST00000524927 CFAP57Q96MR6 1250 aa6.23□□□□□ -1.41
NEDD8-203ENST00000524927 WFIKKN1Q96NZ8 548 aa6.23□□□□□ -1.41
NEDD8-203ENST00000524927 SLITRK2Q9H156 845 aa6.23□□□□□ -1.41
NEDD8-203ENST00000524927 UPF2Q9HAU5 1272 aaKnown RBP6.23□□□□□ -1.41
NEDD8-203ENST00000524927 SH2D2AQ9NP31 389 aa6.23□□□□□ -1.41
NEDD8-203ENST00000524927 MMP25Q9NPA2 562 aa6.23□□□□□ -1.41
NEDD8-203ENST00000524927 DNAH1Q9P2D7 4330 aa6.22□□□□□ -1.41
NEDD8-203ENST00000524927 SACSQ9NZJ4 4579 aa6.22□□□□□ -1.41
NEDD8-203ENST00000524927 A0A0J9YYE9 177 aa6.22□□□□□ -1.41
NEDD8-203ENST00000524927 PRSS47A8MTI9 375 aa6.22□□□□□ -1.41
NEDD8-203ENST00000524927 HCN1O60741 890 aa6.22□□□□□ -1.41
NEDD8-203ENST00000524927 TIPRLO75663 272 aa6.22□□□□□ -1.41
NEDD8-203ENST00000524927 TRBC1P01850 177 aa6.22□□□□□ -1.41
NEDD8-203ENST00000524927 SPARCP09486 303 aa6.22□□□□□ -1.41
NEDD8-203ENST00000524927 C8orf89P0DMQ9 161 aa6.22□□□□□ -1.41
NEDD8-203ENST00000524927 USF1P22415 310 aaPredicted RBP6.22□□□□□ -1.41
NEDD8-203ENST00000524927 HSPA9P38646 679 aaKnown RBP6.22□□□□□ -1.41
NEDD8-203ENST00000524927 CPA2P48052 419 aa6.22□□□□□ -1.41
NEDD8-203ENST00000524927 LGALS3BPQ08380 585 aa6.22□□□□□ -1.41
NEDD8-203ENST00000524927 SLC10A2Q12908 348 aaPredicted RBP6.22□□□□□ -1.41
NEDD8-203ENST00000524927 KRT33BQ14525 404 aa6.22□□□□□ -1.41
NEDD8-203ENST00000524927 NDUFAF5Q5TEU4 345 aa6.22□□□□□ -1.41
Retrieved 100 of 20,778 RNA–protein pairs in 24 ms