RNA–Protein interactions for RNA: ENST00000521232.1

SQLE-205, Transcript of squalene epoxidase, humanhuman

TSL 3

Gene SQLE, Length 711 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SQLE-205ENST00000521232 NUP54Q7Z3B4 507 aa15.64■□□□□ 0.09
SQLE-205ENST00000521232 PRR22Q8IZ63 422 aa15.64■□□□□ 0.09
SQLE-205ENST00000521232 RIBC1Q8N443 379 aaPredicted RBP15.64■□□□□ 0.09
SQLE-205ENST00000521232 RPRMLQ8N4K4 120 aa15.64■□□□□ 0.09
SQLE-205ENST00000521232 OR5M9Q8NGP3 310 aa15.64■□□□□ 0.09
SQLE-205ENST00000521232 OR2W6PQ8NHA6 318 aa15.64■□□□□ 0.09
SQLE-205ENST00000521232 FAM76AQ8TAV0 307 aa15.64■□□□□ 0.09
SQLE-205ENST00000521232 PUM2Q8TB72 1066 aaKnown RBP eCLIP15.64■□□□□ 0.093e-12■■□□□ 12.3
SQLE-205ENST00000521232 CA5BP1Q8WTZ4 195 aa15.64■□□□□ 0.09
SQLE-205ENST00000521232 RND1Q92730 232 aa15.64■□□□□ 0.09
SQLE-205ENST00000521232 EXOSC8Q96B26 276 aaKnown RBP15.64■□□□□ 0.09
SQLE-205ENST00000521232 SARAFQ96BY9 339 aa15.64■□□□□ 0.09
SQLE-205ENST00000521232 ERP27Q96DN0 273 aa15.64■□□□□ 0.09
SQLE-205ENST00000521232 JSRP1Q96MG2 331 aaPredicted RBP15.64■□□□□ 0.09
SQLE-205ENST00000521232 ITPAQ9BY32 194 aa15.64■□□□□ 0.09
SQLE-205ENST00000521232 SHCBP1LQ9BZQ2 653 aa15.64■□□□□ 0.09
SQLE-205ENST00000521232 TNFRSF12AQ9NP84 129 aa15.64■□□□□ 0.09
SQLE-205ENST00000521232 SLC35C2Q9NQQ7 365 aa15.64■□□□□ 0.09
SQLE-205ENST00000521232 MKS1Q9NXB0 559 aa15.64■□□□□ 0.09
SQLE-205ENST00000521232 MID2Q9UJV3 735 aa15.64■□□□□ 0.09
SQLE-205ENST00000521232 WBP11Q9Y2W2 641 aaKnown RBP15.64■□□□□ 0.09
SQLE-205ENST00000521232 C19orf84I3L1E1 186 aa15.63■□□□□ 0.09
SQLE-205ENST00000521232 TO15178 435 aa15.63■□□□□ 0.09
SQLE-205ENST00000521232 PPM1BO75688 479 aa15.63■□□□□ 0.09
SQLE-205ENST00000521232 DDCP20711 480 aa15.63■□□□□ 0.09
SQLE-205ENST00000521232 ENDOUP21128 410 aaKnown RBP15.63■□□□□ 0.09
SQLE-205ENST00000521232 ACVR2AP27037 513 aa15.63■□□□□ 0.09
SQLE-205ENST00000521232 MPIP34949 423 aa15.63■□□□□ 0.09
SQLE-205ENST00000521232 PTGER4P35408 488 aa15.63■□□□□ 0.09
SQLE-205ENST00000521232 KIR3DL1P43629 444 aa15.63■□□□□ 0.09
SQLE-205ENST00000521232 ZNF763Q0D2J5 394 aa15.63■□□□□ 0.09
SQLE-205ENST00000521232 PMPCAQ10713 525 aa15.63■□□□□ 0.09
SQLE-205ENST00000521232 IMPG1Q17R60 797 aa15.63■□□□□ 0.09
SQLE-205ENST00000521232 FNDC7Q5VTL7 733 aa15.63■□□□□ 0.09
SQLE-205ENST00000521232 BICRALQ6AI39 1079 aa15.63■□□□□ 0.09
SQLE-205ENST00000521232 TMEM81Q6P7N7 255 aa15.63■□□□□ 0.09
SQLE-205ENST00000521232 ACAD11Q709F0 780 aa15.63■□□□□ 0.09
SQLE-205ENST00000521232 PACS2Q86VP3 889 aa15.63■□□□□ 0.09
SQLE-205ENST00000521232 C10orf107Q8IVU9 208 aa15.63■□□□□ 0.09
SQLE-205ENST00000521232 MCEMP1Q8IX19 187 aa15.63■□□□□ 0.09
SQLE-205ENST00000521232 BANPQ8N9N5 519 aa15.63■□□□□ 0.09
SQLE-205ENST00000521232 LILRB4Q8NHJ6 448 aa15.63■□□□□ 0.09
SQLE-205ENST00000521232 ASB5Q8WWX0 329 aa15.63■□□□□ 0.09
SQLE-205ENST00000521232 METTL2AQ96IZ6 378 aaKnown RBP15.63■□□□□ 0.09
SQLE-205ENST00000521232 ZNF597Q96LX8 424 aa15.63■□□□□ 0.09
SQLE-205ENST00000521232 RILPQ96NA2 401 aa15.63■□□□□ 0.09
SQLE-205ENST00000521232 EBPLQ9BY08 206 aa15.63■□□□□ 0.09
SQLE-205ENST00000521232 RRAGDQ9NQL2 400 aaPredicted RBP15.63■□□□□ 0.09
SQLE-205ENST00000521232 PFDN4Q9NQP4 134 aa15.63■□□□□ 0.09
SQLE-205ENST00000521232 TAS2R7Q9NYW3 318 aa15.63■□□□□ 0.09
SQLE-205ENST00000521232 TNFRSF10DQ9UBN6 386 aa15.63■□□□□ 0.09
SQLE-205ENST00000521232 B4GALT7Q9UBV7 327 aa15.63■□□□□ 0.09
SQLE-205ENST00000521232 ACAD8Q9UKU7 415 aa15.63■□□□□ 0.09
SQLE-205ENST00000521232 RNF6Q9Y252 685 aa15.63■□□□□ 0.09
SQLE-205ENST00000521232 GPR55Q9Y2T6 319 aaPredicted RBP15.63■□□□□ 0.09
SQLE-205ENST00000521232 CCL27Q9Y4X3 112 aa15.63■□□□□ 0.09
SQLE-205ENST00000521232 PCDHGB3Q9Y5G1 929 aa15.63■□□□□ 0.09
SQLE-205ENST00000521232 FIGNL2A6NMB9 653 aa15.62■□□□□ 0.09
SQLE-205ENST00000521232 MYO1GB0I1T2 1018 aa15.62■□□□□ 0.09
SQLE-205ENST00000521232 NPIPB8E9PQR5 432 aa15.62■□□□□ 0.09
SQLE-205ENST00000521232 TRIM13O60858 407 aa15.62■□□□□ 0.09
SQLE-205ENST00000521232 CRCPO75575 148 aa15.62■□□□□ 0.09
SQLE-205ENST00000521232 RSL1D1O76021 490 aaKnown RBP15.62■□□□□ 0.09
SQLE-205ENST00000521232 COX6B1P14854 86 aa15.62■□□□□ 0.09
SQLE-205ENST00000521232 PRPH2P23942 346 aa15.62■□□□□ 0.09
SQLE-205ENST00000521232 CHRNB4P30926 498 aa15.62■□□□□ 0.09
SQLE-205ENST00000521232 NUP107P57740 925 aa15.62■□□□□ 0.09
SQLE-205ENST00000521232 C2orf80Q0P641 193 aa15.62■□□□□ 0.09
SQLE-205ENST00000521232 PCLAFQ15004 111 aa15.62■□□□□ 0.09
SQLE-205ENST00000521232 KIAA0040Q15053 153 aa15.62■□□□□ 0.09
SQLE-205ENST00000521232 NNATQ16517 81 aa15.62■□□□□ 0.09
SQLE-205ENST00000521232 WLSQ5T9L3 541 aa15.62■□□□□ 0.09
SQLE-205ENST00000521232 RTL6Q6ICC9 239 aa15.62■□□□□ 0.09
SQLE-205ENST00000521232 FAM71E1Q6IPT2 247 aa15.62■□□□□ 0.09
SQLE-205ENST00000521232 ZNF585AQ6P3V2 769 aa15.62■□□□□ 0.09
SQLE-205ENST00000521232 TRABD2AQ86V40 505 aa15.62■□□□□ 0.09
SQLE-205ENST00000521232 OR9A2Q8NGT5 310 aa15.62■□□□□ 0.09
SQLE-205ENST00000521232 NEIL3Q8TAT5 605 aa15.62■□□□□ 0.09
SQLE-205ENST00000521232 AENQ8WTP8 325 aaKnown RBP15.62■□□□□ 0.09
SQLE-205ENST00000521232 KAT2AQ92830 837 aa15.62■□□□□ 0.09
SQLE-205ENST00000521232 HGDQ93099 445 aa15.62■□□□□ 0.09
SQLE-205ENST00000521232 OMA1Q96E52 524 aa15.62■□□□□ 0.09
SQLE-205ENST00000521232 TMEM41AQ96HV5 264 aa15.62■□□□□ 0.09
SQLE-205ENST00000521232 TRMOQ9BU70 441 aa15.62■□□□□ 0.09
SQLE-205ENST00000521232 GATA5Q9BWX5 397 aaPredicted RBP15.62■□□□□ 0.09
SQLE-205ENST00000521232 ROPN1BQ9BZX4 212 aaPredicted RBP15.62■□□□□ 0.09
SQLE-205ENST00000521232 UBQLN3Q9H347 655 aa15.62■□□□□ 0.09
SQLE-205ENST00000521232 EXO5Q9H790 373 aa15.62■□□□□ 0.09
SQLE-205ENST00000521232 ROPN1Q9HAT0 212 aaPredicted RBP15.62■□□□□ 0.09
SQLE-205ENST00000521232 GIMAP4Q9NUV9 329 aa15.62■□□□□ 0.09
SQLE-205ENST00000521232 SPRR3Q9UBC9 169 aa15.62■□□□□ 0.09
SQLE-205ENST00000521232 LGALS13Q9UHV8 139 aa15.62■□□□□ 0.09
SQLE-205ENST00000521232 INTS1Q8N201 2190 aaKnown RBP15.61■□□□□ 0.09
SQLE-205ENST00000521232 FRG2CA6NGY1 282 aa15.61■□□□□ 0.09
SQLE-205ENST00000521232 PLOD3O60568 738 aa15.61■□□□□ 0.09
SQLE-205ENST00000521232 WDR1O75083 606 aa15.61■□□□□ 0.09
SQLE-205ENST00000521232 HPNP05981 417 aa15.61■□□□□ 0.09
SQLE-205ENST00000521232 HOXD4P09016 255 aaPredicted RBP15.61■□□□□ 0.09
SQLE-205ENST00000521232 GDF1P27539 372 aa15.61■□□□□ 0.09
SQLE-205ENST00000521232 SNTA1Q13424 505 aa15.61■□□□□ 0.09
Retrieved 100 of 20,778 RNA–protein pairs in 20.3 ms