RNA–Protein interactions for RNA: ENST00000520133.5

COL13A1-212, Transcript of collagen type XIII alpha 1 chain, humanhuman

TSL 5 BASIC

Gene COL13A1, Length 1,833 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL13A1-212ENST00000520133 WDR5BQ86VZ2 330 aa25.24■■□□□ 1.63
COL13A1-212ENST00000520133 SLC5A8Q8N695 610 aa25.24■■□□□ 1.63
COL13A1-212ENST00000520133 VANGL1Q8TAA9 524 aaPredicted RBP25.24■■□□□ 1.63
COL13A1-212ENST00000520133 SLC35A4Q96G79 324 aa25.24■■□□□ 1.63
COL13A1-212ENST00000520133 PINK1Q9BXM7 581 aa25.24■■□□□ 1.63
COL13A1-212ENST00000520133 ZNF556Q9HAH1 456 aa25.24■■□□□ 1.63
COL13A1-212ENST00000520133 HCN4Q9Y3Q4 1203 aa25.24■■□□□ 1.63
COL13A1-212ENST00000520133 DUX1O43812 170 aa25.23■■□□□ 1.63
COL13A1-212ENST00000520133 CLK3P49761 638 aaKnown RBP25.23■■□□□ 1.63
COL13A1-212ENST00000520133 HLCSP50747 726 aa25.23■■□□□ 1.63
COL13A1-212ENST00000520133 OR1D5P58170 312 aa25.23■■□□□ 1.63
COL13A1-212ENST00000520133 CD47Q08722 323 aa25.23■■□□□ 1.63
COL13A1-212ENST00000520133 TOP3AQ13472 1001 aaPredicted RBP25.23■■□□□ 1.63
COL13A1-212ENST00000520133 RAPSNQ13702 412 aa25.23■■□□□ 1.63
COL13A1-212ENST00000520133 TRMT12Q53H54 448 aaKnown RBP25.23■■□□□ 1.63
COL13A1-212ENST00000520133 C6orf141Q5SZD1 244 aa25.23■■□□□ 1.63
COL13A1-212ENST00000520133 TCTN3Q6NUS6 607 aa25.23■■□□□ 1.63
COL13A1-212ENST00000520133 DEF8Q6ZN54 512 aa25.23■■□□□ 1.63
COL13A1-212ENST00000520133 PLXDC1Q8IUK5 500 aa25.23■■□□□ 1.63
COL13A1-212ENST00000520133 SLC35F3Q8IY50 421 aa25.23■■□□□ 1.63
COL13A1-212ENST00000520133 SLC16A11Q8NCK7 471 aa25.23■■□□□ 1.63
COL13A1-212ENST00000520133 CHDHQ8NE62 594 aaPredicted RBP25.23■■□□□ 1.63
COL13A1-212ENST00000520133 SLC9A6Q92581 669 aa25.23■■□□□ 1.63
COL13A1-212ENST00000520133 ANKRD9Q96BM1 317 aaPredicted RBP25.23■■□□□ 1.63
COL13A1-212ENST00000520133 ALPK1Q96QP1 1244 aa25.23■■□□□ 1.63
COL13A1-212ENST00000520133 GABARAPL3Q9BY60 117 aa25.23■■□□□ 1.63
COL13A1-212ENST00000520133 SLC38A1Q9H2H9 487 aa25.23■■□□□ 1.63
COL13A1-212ENST00000520133 ADNPQ9H2P0 1102 aa25.23■■□□□ 1.63
COL13A1-212ENST00000520133 PAPOLBQ9NRJ5 636 aaKnown RBP25.23■■□□□ 1.63
COL13A1-212ENST00000520133 KLHL3Q9UH77 587 aa25.23■■□□□ 1.63
COL13A1-212ENST00000520133 BLOC1S6Q9UL45 172 aa25.23■■□□□ 1.63
COL13A1-212ENST00000520133 POFUT2Q9Y2G5 429 aa25.23■■□□□ 1.63
COL13A1-212ENST00000520133 UNC13CQ8NB66 2214 aa25.23■■□□□ 1.63
COL13A1-212ENST00000520133 ARID1BQ8NFD5 2236 aaPredicted RBP25.23■■□□□ 1.63
COL13A1-212ENST00000520133 IGHV1OR21-1A0A087WYE8 117 aa25.23■■□□□ 1.63
COL13A1-212ENST00000520133 ARRDC5A6NEK1 342 aa25.23■■□□□ 1.63
COL13A1-212ENST00000520133 FOXS1O43638 330 aa25.23■■□□□ 1.63
COL13A1-212ENST00000520133 ALPPP05187 535 aa25.23■■□□□ 1.63
COL13A1-212ENST00000520133 SLC35E2P0CK97 266 aa25.23■■□□□ 1.63
COL13A1-212ENST00000520133 SMIM11AP58511 58 aa25.23■■□□□ 1.63
COL13A1-212ENST00000520133 IL5RAQ01344 420 aa25.23■■□□□ 1.63
COL13A1-212ENST00000520133 MEP1AQ16819 746 aa25.23■■□□□ 1.63
COL13A1-212ENST00000520133 PRICKLE4Q2TBC4 344 aa25.23■■□□□ 1.63
COL13A1-212ENST00000520133 FHL5Q5TD97 284 aa25.23■■□□□ 1.63
COL13A1-212ENST00000520133 OLIG3Q7RTU3 272 aa25.23■■□□□ 1.63
COL13A1-212ENST00000520133 OR6C4Q8NGE1 309 aa25.23■■□□□ 1.63
COL13A1-212ENST00000520133 ADAMTS16Q8TE57 1224 aa25.23■■□□□ 1.63
COL13A1-212ENST00000520133 NDRG4Q9ULP0 352 aaKnown RBP25.23■■□□□ 1.63
COL13A1-212ENST00000520133 TMCC3Q9ULS5 477 aa25.23■■□□□ 1.63
COL13A1-212ENST00000520133 DSPPQ9NZW4 1301 aa25.22■■□□□ 1.63
COL13A1-212ENST00000520133 PCDH17O14917 1159 aa25.22■■□□□ 1.63
COL13A1-212ENST00000520133 LGI1O95970 557 aa25.22■■□□□ 1.63
COL13A1-212ENST00000520133 AVPR1BP47901 424 aa25.22■■□□□ 1.63
COL13A1-212ENST00000520133 GPLD1P80108 840 aa25.22■■□□□ 1.63
COL13A1-212ENST00000520133 CHRNEQ04844 493 aa25.22■■□□□ 1.63
COL13A1-212ENST00000520133 PMS2CLQ68D20 193 aa25.22■■□□□ 1.63
COL13A1-212ENST00000520133 ZCCHC12Q6PEW1 402 aa25.22■■□□□ 1.63
COL13A1-212ENST00000520133 TSPYL5Q86VY4 417 aaPredicted RBP25.22■■□□□ 1.63
COL13A1-212ENST00000520133 ADAP2Q9NPF8 381 aa25.22■■□□□ 1.63
COL13A1-212ENST00000520133 HCN3Q9P1Z3 774 aa25.22■■□□□ 1.63
COL13A1-212ENST00000520133 RHCGQ9UBD6 479 aa25.22■■□□□ 1.63
COL13A1-212ENST00000520133 SUSD2Q9UGT4 822 aa25.22■■□□□ 1.63
COL13A1-212ENST00000520133 FFAR1O14842 300 aa25.21■■□□□ 1.63
COL13A1-212ENST00000520133 ALDH3B2P48448 385 aa25.21■■□□□ 1.63
COL13A1-212ENST00000520133 ZNF311Q5JNZ3 666 aa25.21■■□□□ 1.63
COL13A1-212ENST00000520133 SHISA5Q8N114 240 aa25.21■■□□□ 1.63
COL13A1-212ENST00000520133 CDS1Q92903 461 aa25.21■■□□□ 1.63
COL13A1-212ENST00000520133 PIGUQ9H490 435 aa25.21■■□□□ 1.63
COL13A1-212ENST00000520133 NMNAT1Q9HAN9 279 aaPredicted RBP25.21■■□□□ 1.63
COL13A1-212ENST00000520133 PRMT8Q9NR22 394 aaPredicted RBP25.21■■□□□ 1.63
COL13A1-212ENST00000520133 MAT2BQ9NZL9 334 aa25.21■■□□□ 1.63
COL13A1-212ENST00000520133 ENOPH1Q9UHY7 261 aa25.21■■□□□ 1.63
COL13A1-212ENST00000520133 SLC13A4Q9UKG4 626 aa25.21■■□□□ 1.63
COL13A1-212ENST00000520133 SYT5O00445 386 aa25.21■■□□□ 1.63
COL13A1-212ENST00000520133 MED26O95402 600 aa25.21■■□□□ 1.63
COL13A1-212ENST00000520133 PDGFBP01127 241 aaPredicted RBP25.21■■□□□ 1.63
COL13A1-212ENST00000520133 IL7RP16871 459 aa25.21■■□□□ 1.63
COL13A1-212ENST00000520133 EEF1B2P24534 225 aaKnown RBP25.21■■□□□ 1.63
COL13A1-212ENST00000520133 SOX18P35713 384 aa25.21■■□□□ 1.63
COL13A1-212ENST00000520133 ARL4DP49703 201 aa25.21■■□□□ 1.63
COL13A1-212ENST00000520133 GRM7Q14831 915 aa25.21■■□□□ 1.63
COL13A1-212ENST00000520133 CTU2Q2VPK5 515 aaKnown RBP25.21■■□□□ 1.63
COL13A1-212ENST00000520133 INAVAQ3KP66 663 aa25.21■■□□□ 1.63
COL13A1-212ENST00000520133 WDR53Q7Z5U6 358 aaPredicted RBP25.21■■□□□ 1.63
COL13A1-212ENST00000520133 ZNF595Q8IYB9 648 aa25.21■■□□□ 1.63
COL13A1-212ENST00000520133 CDRT4Q8N9R6 151 aa25.21■■□□□ 1.63
COL13A1-212ENST00000520133 OR4D11Q8NGI4 311 aa25.21■■□□□ 1.63
COL13A1-212ENST00000520133 FBLIM1Q8WUP2 373 aa25.21■■□□□ 1.63
COL13A1-212ENST00000520133 DHRS1Q96LJ7 313 aa25.21■■□□□ 1.63
COL13A1-212ENST00000520133 CACYBPQ9HB71 228 aaKnown RBP25.21■■□□□ 1.63
COL13A1-212ENST00000520133 ACAD8Q9UKU7 415 aa25.21■■□□□ 1.63
COL13A1-212ENST00000520133 ASXL3Q9C0F0 2248 aa25.2■■□□□ 1.62
COL13A1-212ENST00000520133 TNRC6BQ9UPQ9 1833 aaKnown RBP25.2■■□□□ 1.62
COL13A1-212ENST00000520133 FITM1A5D6W6 292 aa25.2■■□□□ 1.62
COL13A1-212ENST00000520133 CLDN4O14493 209 aa25.2■■□□□ 1.62
COL13A1-212ENST00000520133 OR10H2O60403 315 aa25.2■■□□□ 1.62
COL13A1-212ENST00000520133 NME6O75414 186 aaPredicted RBP25.2■■□□□ 1.62
COL13A1-212ENST00000520133 H1F0P07305 194 aaKnown RBP25.2■■□□□ 1.62
COL13A1-212ENST00000520133 ALOX5P09917 674 aa25.2■■□□□ 1.62
COL13A1-212ENST00000520133 GIMD1P0DJR0 217 aa25.2■■□□□ 1.62
Retrieved 100 of 20,778 RNA–protein pairs in 45.8 ms